Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:39:55 (3695921): wrapper (7.7.26015): starting
10:39:55 (3695921): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 10:39:55] Arguments: --nthreads 4
[2026-05-04 10:39:55] Threads: 4
[2026-05-04 10:39:55] Checking for CVMFS
[2026-05-04 10:39:55] No cvmfs_config command found, will try listing directly
[2026-05-04 10:39:55] CVMFS is ok
[2026-05-04 10:39:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 10:39:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 10:39:55] Further information can be found at the LHC@home message board.
[2026-05-04 10:39:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 10:39:55] Checking for apptainer binary...
[2026-05-04 10:39:55] which: no apptainer in ((null))
[2026-05-04 10:39:55] apptainer is not installed, using version from CVMFS
[2026-05-04 10:39:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 10:39:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-05-04 10:39:55] apptainer works
[2026-05-04 10:39:55] Set ATHENA_PROC_NUMBER=4
[2026-05-04 10:39:55] Set ATHENA_CORE_NUMBER=4
[2026-05-04 10:39:55] Starting ATLAS job with PandaID=7119647373
[2026-05-04 10:39:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 13:45:48]  *** The last 200 lines of the pilot log: ***
[2026-05-04 13:45:48] 2026-05-04 11:37:42,035 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-04 13:45:48] 2026-05-04 11:37:42,130 | INFO     | job 7119647373 has state=finished
[2026-05-04 13:45:48] 2026-05-04 11:37:42,130 | INFO     | preparing for final server update for job 7119647373 in state='finished'
[2026-05-04 13:45:48] 2026-05-04 11:37:42,131 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7119647373/jobReport.json
[2026-05-04 13:45:48] 2026-05-04 11:37:42,133 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/0/workernode_map.json
[2026-05-04 13:45:48] 2026-05-04 11:37:42,134 | INFO     | this job has now completed (state=finished)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,134 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,134 | INFO     | log transfer has been attempted: DONE
[2026-05-04 13:45:48] 2026-05-04 11:37:42,134 | INFO     | job 7119647373 has finished - writing final server update
[2026-05-04 13:45:48] 2026-05-04 11:37:42,134 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1884668/.job.ad'
[2026-05-04 13:45:48] 2026-05-04 11:37:42,135 | INFO     | total number of processed events: 400 (read)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,160 | INFO     | using path: /var/lib/boinc/var/slot72/slots/0/PanDA_Pilot-7119647373/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,160 | INFO     | extracted standard info from prmon json
[2026-05-04 13:45:48] 2026-05-04 11:37:42,161 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 13:45:48] 2026-05-04 11:37:42,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 13:45:48] 2026-05-04 11:37:42,161 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 13:45:48] 2026-05-04 11:37:42,164 | INFO     | fitting pss+swap vs Time
[2026-05-04 13:45:48] 2026-05-04 11:37:42,165 | INFO     | sum of square deviations: 1633472487.5
[2026-05-04 13:45:48] 2026-05-04 11:37:42,166 | INFO     | sum of deviations: 21569161897.999996
[2026-05-04 13:45:48] 2026-05-04 11:37:42,166 | INFO     | mean x (centered): 0.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,166 | INFO     | mean y: 2309738.8505747127
[2026-05-04 13:45:48] 2026-05-04 11:37:42,166 | INFO     | intersect: 2309738.8505747127
[2026-05-04 13:45:48] 2026-05-04 11:37:42,167 | INFO     | chi2: 1.4212413303493436
[2026-05-04 13:45:48] 2026-05-04 11:37:42,167 | INFO     | sum of square deviations: 1496660620.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,168 | INFO     | sum of deviations: 20783304327.000004
[2026-05-04 13:45:48] 2026-05-04 11:37:42,168 | INFO     | mean x (centered): 0.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,168 | INFO     | mean y: 2308862.668639053
[2026-05-04 13:45:48] 2026-05-04 11:37:42,168 | INFO     | intersect: 2308862.668639053
[2026-05-04 13:45:48] 2026-05-04 11:37:42,169 | INFO     | chi2: 1.4224285468025133
[2026-05-04 13:45:48] 2026-05-04 11:37:42,169 | INFO     | current chi2=1.4224285468025133 (change=-0.08353376923522478 %)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,169 | INFO     | right removable region: 168
[2026-05-04 13:45:48] 2026-05-04 11:37:42,169 | INFO     | sum of square deviations: 1496660620.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,170 | INFO     | sum of deviations: -2445784569.0000005
[2026-05-04 13:45:48] 2026-05-04 11:37:42,170 | INFO     | mean x (centered): 0.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,170 | INFO     | mean y: 2336147.24852071
[2026-05-04 13:45:48] 2026-05-04 11:37:42,171 | INFO     | intersect: 2336147.24852071
[2026-05-04 13:45:48] 2026-05-04 11:37:42,171 | INFO     | chi2: 0.006037906033545051
[2026-05-04 13:45:48] 2026-05-04 11:37:42,171 | INFO     | current chi2=0.006037906033545051 (change=99.57516672892837 %)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,171 | INFO     | sum of square deviations: 1367709365.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,172 | INFO     | sum of deviations: -2470185972.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,172 | INFO     | mean x (centered): 0.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,172 | INFO     | mean y: 2336171.4024390243
[2026-05-04 13:45:48] 2026-05-04 11:37:42,172 | INFO     | intersect: 2336171.4024390243
[2026-05-04 13:45:48] 2026-05-04 11:37:42,173 | INFO     | chi2: 0.0058610876569654075
[2026-05-04 13:45:48] 2026-05-04 11:37:42,173 | INFO     | current chi2=0.0058610876569654075 (change=2.9284718178336404 %)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,173 | INFO     | left removable region: 10
[2026-05-04 13:45:48] 2026-05-04 11:37:42,173 | INFO     | sum of square deviations: 1223016419.5
[2026-05-04 13:45:48] 2026-05-04 11:37:42,174 | INFO     | sum of deviations: -2565236995.5000005
[2026-05-04 13:45:48] 2026-05-04 11:37:42,174 | INFO     | mean x (centered): 0.0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,175 | INFO     | mean y: 2336051.1835443038
[2026-05-04 13:45:48] 2026-05-04 11:37:42,175 | INFO     | intersect: 2336051.1835443038
[2026-05-04 13:45:48] 2026-05-04 11:37:42,175 | INFO     | chi2: 0.005680860671804607
[2026-05-04 13:45:48] 2026-05-04 11:37:42,175 | INFO     | current memory leak: -2.10 B/s (using 158 data points, chi2=0.01)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,175 | INFO     | could have reported an average CPU frequency of 2749 MHz (9 samples)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | ..............................
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . Timing measurements:
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . get job = 0 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . initial setup = 9 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . payload setup = 16 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . stage-in = 0 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . payload execution = 10607 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . stage-out = 0 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | . log creation = 0 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,176 | INFO     | ..............................
[2026-05-04 13:45:48] 2026-05-04 11:37:42,763 | INFO     | 
[2026-05-04 13:45:48] 2026-05-04 11:37:42,763 | INFO     | job summary report
[2026-05-04 13:45:48] 2026-05-04 11:37:42,763 | INFO     | --------------------------------------------------
[2026-05-04 13:45:48] 2026-05-04 11:37:42,763 | INFO     | PanDA job id: 7119647373
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | task id: 49263191
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | errors: (none)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | pilot state: finished 
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | transexitcode: 0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | exeerrorcode: 0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | exeerrordiag: 
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | exitcode: 0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | exitmsg: OK
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | cpuconsumptiontime: 39359 s
[2026-05-04 13:45:48] 2026-05-04 11:37:42,764 | INFO     | nevents: 400
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | neventsw: 0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | pid: 3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | pgrp: 3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | corecount: 4
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | event service: False
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | sizes: {0: 2269785, 1: 2272282, 12: 2272282, 10627: 2301634, 10628: 2310654, 10629: 2311096}
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | --------------------------------------------------
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | 
[2026-05-04 13:45:48] 2026-05-04 11:37:42,765 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/0
[2026-05-04 13:45:48] 2026-05-04 11:37:42,798 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,799 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 13:45:48] 2026-05-04 11:37:42,800 | INFO     | job 7119647373 has completed (purged errors)
[2026-05-04 13:45:48] 2026-05-04 11:37:42,801 | INFO     | overall cleanup function is called
[2026-05-04 13:45:48] 2026-05-04 11:37:43,810 | INFO     | --- collectZombieJob: --- 10, [3710772]
[2026-05-04 13:45:48] 2026-05-04 11:37:43,810 | INFO     | zombie collector waiting for pid 3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:43,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 13:45:48] 2026-05-04 11:37:43,810 | INFO     | collected zombie processes
[2026-05-04 13:45:48] 2026-05-04 11:37:43,810 | INFO     | will attempt to kill all subprocesses of pid=3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:44,498 | INFO     | process IDs to be killed: [3710772] (in reverse order)
[2026-05-04 13:45:48] 2026-05-04 11:37:44,838 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 13:45:48] 2026-05-04 11:37:44,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 13:45:48] 2026-05-04 11:37:44,869 | INFO     | did not find any defunct processes belonging to 3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:44,895 | INFO     | did not find any defunct processes belonging to 3710772
[2026-05-04 13:45:48] 2026-05-04 11:37:44,896 | INFO     | Ready for new job
[2026-05-04 13:45:48] 2026-05-04 11:37:44,898 | INFO     | ***************************************
[2026-05-04 13:45:48] 2026-05-04 11:37:44,898 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 13:45:48] 2026-05-04 11:37:44,898 | INFO     | ***************************************
[2026-05-04 13:45:48] 2026-05-04 11:37:44,898 | INFO     | 
[2026-05-04 13:45:48] 2026-05-04 11:37:44,906 | INFO     | architecture information:
[2026-05-04 13:45:48] 2026-05-04 11:37:44,906 | INFO     | executing command: cat /etc/os-release
[2026-05-04 13:45:48] 2026-05-04 11:37:44,931 | INFO     | cat /etc/os-release:
[2026-05-04 13:45:48] NAME="CentOS Linux"
[2026-05-04 13:45:48] VERSION="7 (Core)"
[2026-05-04 13:45:48] ID="centos"
[2026-05-04 13:45:48] ID_LIKE="rhel fedora"
[2026-05-04 13:45:48] VERSION_ID="7"
[2026-05-04 13:45:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 13:45:48] ANSI_COLOR="0;31"
[2026-05-04 13:45:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 13:45:48] HOME_URL="https://www.centos.org/"
[2026-05-04 13:45:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 13:45:48] 
[2026-05-04 13:45:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 13:45:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 13:45:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 13:45:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 13:45:48] 
[2026-05-04 13:45:48] 2026-05-04 11:37:44,932 | INFO     | ***************************************
[2026-05-04 13:45:48] 2026-05-04 11:37:45,434 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/0
[2026-05-04 13:45:48] 2026-05-04 11:37:45,462 | INFO     | sufficient remaining disk space (238778580992 B)
[2026-05-04 13:45:48] 2026-05-04 11:37:45,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 13:45:48] 2026-05-04 11:37:45,462 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 13:45:48] 2026-05-04 11:37:45,462 | INFO     | update_server=False
[2026-05-04 13:45:48] 2026-05-04 11:37:45,463 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 13:45:48] 2026-05-04 11:37:45,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 13:45:48] 2026-05-04 11:37:45,463 | INFO     | aborting loop
[2026-05-04 13:45:48] 2026-05-04 11:37:45,958 | INFO     | all payload control threads have been joined
[2026-05-04 13:45:48] 2026-05-04 11:37:46,259 | INFO     | all job control threads have been joined
[2026-05-04 13:45:48] 2026-05-04 11:37:46,314 | INFO     | all data control threads have been joined
[2026-05-04 13:45:48] 2026-05-04 11:37:46,468 | INFO     | [job] job monitor thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:46,469 | INFO     | [job] retrieve thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:46,562 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:46,586 | INFO     | [payload] failed_post thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:46,709 | INFO     | [job] validate thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:46,746 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 13:45:48] 2026-05-04 11:37:46,963 | INFO     | [payload] control thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,258 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,264 | INFO     | [job] control thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 13:45:48] 2026-05-04 11:37:47,319 | INFO     | [data] control thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,447 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,747 | INFO     | [payload] validate_post thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:47,759 | INFO     | [data] copytool_in thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:48,135 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 13:45:48] 2026-05-04 11:37:48,285 | INFO     | [job] queue monitor thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:48,751 | INFO     | [data] copytool_out thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:52,141 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:37:55,969 | INFO     | job.realtimelogging is not enabled
[2026-05-04 13:45:48] 2026-05-04 11:37:56,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 13:45:48] 2026-05-04 11:38:14,176 | INFO     | 10652s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-05-04 13:45:48] 2026-05-04 11:38:16,079 | INFO     | PID=3705462 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 13:45:48] 2026-05-04 11:38:16,079 | INFO     | .. there are 23 such processes running
[2026-05-04 13:45:48] 2026-05-04 11:38:16,079 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 13:45:48] 2026-05-04 11:38:16,079 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 13:45:48] 2026-05-04 11:38:16,079 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 13:45:48] 2026-05-04 11:38:38,808 | INFO     | [monitor] cgroup control has ended
[2026-05-04 13:45:48] 2026-05-04 11:38:39,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23297908565824)>', '<ExcThread(monitor, started 23297667634944)>']
[2026-05-04 13:45:48] 2026-05-04 11:38:40,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 13:45:48] 2026-05-04 11:38:40,199 | INFO     | [monitor] control thread has ended
[2026-05-04 13:45:48] 2026-05-04 11:38:44,838 | INFO     | all workflow threads have been joined
[2026-05-04 13:45:48] 2026-05-04 11:38:44,838 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 13:45:48] 2026-05-04 11:38:44,838 | INFO     | traces error code: 0
[2026-05-04 13:45:48] 2026-05-04 11:38:44,839 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 13:45:48] 2026-05-04 11:38:45,023 [wrapper] ==== pilot stdout END ====
[2026-05-04 13:45:48] 2026-05-04 11:38:45,028 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 13:45:48] 2026-05-04 11:38:45,032 [wrapper] pilotpid: 3705462
[2026-05-04 13:45:48] 2026-05-04 11:38:45,038 [wrapper] Pilot exit status: 0
[2026-05-04 13:45:48] 2026-05-04 11:38:45,052 [wrapper] pandaids: 7119647373
[2026-05-04 13:45:48] 2026-05-04 11:38:45,268 [wrapper] cleanup supervisor_pilot 4180162 3705463
[2026-05-04 13:45:48] 2026-05-04 11:38:45,273 [wrapper] Test setup, not cleaning
[2026-05-04 13:45:48] 2026-05-04 11:38:45,280 [wrapper] apfmon messages muted
[2026-05-04 13:45:48] 2026-05-04 11:38:45,284 [wrapper] ==== wrapper stdout END ====
[2026-05-04 13:45:48] 2026-05-04 11:38:45,289 [wrapper] ==== wrapper stderr END ====
[2026-05-04 13:45:48]  *** Error codes and diagnostics ***
[2026-05-04 13:45:48]     "exeErrorCode": 0,
[2026-05-04 13:45:48]     "pilotErrorCode": 0,
[2026-05-04 13:45:48]  *** Listing of results directory ***
[2026-05-04 13:45:48] total 414696
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc    683926 May  1 05:51 pilot3.tar.gz
[2026-05-04 13:45:48] -rwx------. 1 boinc boinc     36322 May  1 05:52 runpilot2-wrapper.sh
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc      5631 May  1 05:54 queuedata.json
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc       100 May  4 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 13:45:48] -rwxr-xr-x. 1 boinc boinc      7986 May  4 10:39 run_atlas
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc       105 May  4 10:39 job.xml
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc 223741734 May  4 10:39 EVNT.49263189._001657.pool.root.1
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc      6540 May  4 10:39 init_data.xml
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc     15667 May  4 10:39 start_atlas.sh
[2026-05-04 13:45:48] drwxrwx--x. 2 boinc boinc      4096 May  4 10:39 shared
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc    697421 May  4 10:39 input.tar.gz
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc         0 May  4 10:39 boinc_lockfile
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc      2576 May  4 10:39 pandaJob.out
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc   1002662 May  4 10:40 agis_schedconf.cvmfs.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc   1505932 May  4 10:40 agis_ddmendpoints.agis.ALL.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc       442 May  4 10:40 workernode_map.json
[2026-05-04 13:45:48] drwx------. 5 boinc boinc      4096 May  4 10:40 pilot3
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc 194189771 May  4 13:37 HITS.49263191._083700.pool.root.1
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc       487 May  4 13:37 boinc_task_state.xml
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc        95 May  4 13:37 pilot_heartbeat.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc      1029 May  4 13:37 memory_monitor_summary.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc    311910 May  4 13:37 log.49263191._083700.job.log.tgz.1
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc      6376 May  4 13:37 heartbeat_new.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc      6267 May  4 13:37 heartbeat.json
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc      5021 May  4 13:38 pilotlog.txt
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc    976039 May  4 13:38 log.49263191._083700.job.log.1
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc       357 May  4 13:38 output.list
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc       410 May  4 13:38 runtime_log
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc   1310720 May  4 13:38 result.tar.gz
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc      8828 May  4 13:38 runtime_log.err
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc       665 May  4 13:38 237d12f3f891.diag
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc        27 May  4 13:45 wrapper_checkpoint.txt
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc      8192 May  4 13:45 boinc_mmap_file
[2026-05-04 13:45:48] -rw-r--r--. 1 boinc boinc     21077 May  4 13:45 stderr.txt
[2026-05-04 13:45:48] HITS file was successfully produced:
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc 194189771 May  4 13:37 shared/HITS.pool.root.1
[2026-05-04 13:45:48]  *** Contents of shared directory: ***
[2026-05-04 13:45:48] total 410128
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc 223741734 May  4 10:39 ATLAS.root_0
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc     15667 May  4 10:39 start_atlas.sh
[2026-05-04 13:45:48] -rw-r--r--. 2 boinc boinc    697421 May  4 10:39 input.tar.gz
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc 194189771 May  4 13:37 HITS.pool.root.1
[2026-05-04 13:45:48] -rw-------. 1 boinc boinc   1310720 May  4 13:38 result.tar.gz
13:45:50 (3695921): run_atlas exited; CPU time 39961.861959
13:45:50 (3695921): called boinc_finish(0)

</stderr_txt>
]]>

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