Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:16:52 (1880830): wrapper (7.7.26015): starting
19:16:52 (1880830): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 19:16:52] Arguments: --nthreads 4
[2026-05-01 19:16:52] Threads: 4
[2026-05-01 19:16:52] Checking for CVMFS
[2026-05-01 19:16:52] No cvmfs_config command found, will try listing directly
[2026-05-01 19:16:52] CVMFS is ok
[2026-05-01 19:16:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 19:16:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 19:16:53] Further information can be found at the LHC@home message board.
[2026-05-01 19:16:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 19:16:53] Checking for apptainer binary...
[2026-05-01 19:16:53] which: no apptainer in ((null))
[2026-05-01 19:16:53] apptainer is not installed, using version from CVMFS
[2026-05-01 19:16:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 19:16:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/27/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-05-01 19:16:55] apptainer works
[2026-05-01 19:16:55] Set ATHENA_PROC_NUMBER=4
[2026-05-01 19:16:55] Set ATHENA_CORE_NUMBER=4
[2026-05-01 19:16:55] Starting ATLAS job with PandaID=7123425694
[2026-05-01 19:16:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 23:00:10]  *** The last 200 lines of the pilot log: ***
[2026-05-01 23:00:10] 2026-05-01 20:59:28,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 23:00:10] 2026-05-01 20:59:28,537 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 23:00:10] 2026-05-01 20:59:29,257 | INFO     | job 7123425694 has state=finished
[2026-05-01 23:00:10] 2026-05-01 20:59:29,257 | INFO     | preparing for final server update for job 7123425694 in state='finished'
[2026-05-01 23:00:10] 2026-05-01 20:59:29,258 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/27/PanDA_Pilot-7123425694/jobReport.json
[2026-05-01 23:00:10] 2026-05-01 20:59:29,260 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/27/workernode_map.json
[2026-05-01 23:00:10] 2026-05-01 20:59:29,261 | INFO     | this job has now completed (state=finished)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,261 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,261 | INFO     | log transfer has been attempted: DONE
[2026-05-01 23:00:10] 2026-05-01 20:59:29,261 | INFO     | job 7123425694 has finished - writing final server update
[2026-05-01 23:00:10] 2026-05-01 20:59:29,262 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1833177/.job.ad'
[2026-05-01 23:00:10] 2026-05-01 20:59:29,262 | INFO     | total number of processed events: 400 (read)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,274 | INFO     | using path: /var/lib/boinc/var/slot16/slots/27/PanDA_Pilot-7123425694/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,275 | INFO     | extracted standard info from prmon json
[2026-05-01 23:00:10] 2026-05-01 20:59:29,275 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 23:00:10] 2026-05-01 20:59:29,275 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 23:00:10] 2026-05-01 20:59:29,276 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 23:00:10] 2026-05-01 20:59:29,280 | INFO     | fitting pss+swap vs Time
[2026-05-01 23:00:10] 2026-05-01 20:59:29,280 | INFO     | sum of square deviations: 3124858590.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,282 | INFO     | sum of deviations: -21935100897.99999
[2026-05-01 23:00:10] 2026-05-01 20:59:29,282 | INFO     | mean x (centered): 0.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,282 | INFO     | mean y: 2374821.638888889
[2026-05-01 23:00:10] 2026-05-01 20:59:29,282 | INFO     | intersect: 2374821.638888889
[2026-05-01 23:00:10] 2026-05-01 20:59:29,282 | INFO     | chi2: 2.477494517208859
[2026-05-01 23:00:10] 2026-05-01 20:59:29,283 | INFO     | sum of square deviations: 2912836010.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,284 | INFO     | sum of deviations: -21168860377.99998
[2026-05-01 23:00:10] 2026-05-01 20:59:29,284 | INFO     | mean x (centered): 0.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,284 | INFO     | mean y: 2375372.8720379146
[2026-05-01 23:00:10] 2026-05-01 20:59:29,285 | INFO     | intersect: 2375372.8720379146
[2026-05-01 23:00:10] 2026-05-01 20:59:29,285 | INFO     | chi2: 2.4750165302871183
[2026-05-01 23:00:10] 2026-05-01 20:59:29,285 | INFO     | current chi2=2.4750165302871183 (change=0.10001987510076557 %)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,285 | INFO     | right removable region: 210
[2026-05-01 23:00:10] 2026-05-01 20:59:29,286 | INFO     | sum of square deviations: 2912836010.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,287 | INFO     | sum of deviations: -62374082340.00003
[2026-05-01 23:00:10] 2026-05-01 20:59:29,287 | INFO     | mean x (centered): 0.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,287 | INFO     | mean y: 2403653.516587678
[2026-05-01 23:00:10] 2026-05-01 20:59:29,287 | INFO     | intersect: 2403653.516587678
[2026-05-01 23:00:10] 2026-05-01 20:59:29,288 | INFO     | chi2: 0.34316704772516576
[2026-05-01 23:00:10] 2026-05-01 20:59:29,288 | INFO     | current chi2=0.34316704772516576 (change=86.14862534138815 %)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,288 | INFO     | sum of square deviations: 2710627567.5
[2026-05-01 23:00:10] 2026-05-01 20:59:29,289 | INFO     | sum of deviations: -58031482000.5
[2026-05-01 23:00:10] 2026-05-01 20:59:29,289 | INFO     | mean x (centered): 0.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,290 | INFO     | mean y: 2400339.2669902914
[2026-05-01 23:00:10] 2026-05-01 20:59:29,290 | INFO     | intersect: 2400339.2669902914
[2026-05-01 23:00:10] 2026-05-01 20:59:29,290 | INFO     | chi2: 0.329370353696191
[2026-05-01 23:00:10] 2026-05-01 20:59:29,290 | INFO     | current chi2=0.329370353696191 (change=4.020401760726224 %)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,290 | INFO     | left removable region: 10
[2026-05-01 23:00:10] 2026-05-01 20:59:29,291 | INFO     | sum of square deviations: 2480604650.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,292 | INFO     | sum of deviations: -56192906132.5
[2026-05-01 23:00:10] 2026-05-01 20:59:29,292 | INFO     | mean x (centered): 0.0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,292 | INFO     | mean y: 2401802.405
[2026-05-01 23:00:10] 2026-05-01 20:59:29,292 | INFO     | intersect: 2401802.405
[2026-05-01 23:00:10] 2026-05-01 20:59:29,293 | INFO     | chi2: 0.3216156376717363
[2026-05-01 23:00:10] 2026-05-01 20:59:29,293 | INFO     | current memory leak: -22.65 B/s (using 200 data points, chi2=0.32)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,293 | INFO     | could have reported an average CPU frequency of 2465 MHz (11 samples)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | ..............................
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . Timing measurements:
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . get job = 0 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . initial setup = 35 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . payload setup = 58 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . stage-in = 0 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . payload execution = 13180 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . stage-out = 1 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | . log creation = 0 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,294 | INFO     | ..............................
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | 
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | job summary report
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | --------------------------------------------------
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | PanDA job id: 7123425694
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | task id: 50017005
[2026-05-01 23:00:10] 2026-05-01 20:59:29,522 | INFO     | errors: (none)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | pilot state: finished 
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | transexitcode: 0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | exeerrorcode: 0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | exeerrordiag: 
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | exitcode: 0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | exitmsg: OK
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | cpuconsumptiontime: 33947 s
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | nevents: 400
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | neventsw: 0
[2026-05-01 23:00:10] 2026-05-01 20:59:29,523 | INFO     | pid: 1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | pgrp: 1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | corecount: 4
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | event service: False
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | sizes: {0: 2275124, 1: 2277009, 2: 2277009, 13242: 2307326, 13244: 2316348, 13245: 2316726}
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | --------------------------------------------------
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | 
[2026-05-01 23:00:10] 2026-05-01 20:59:29,524 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/27
[2026-05-01 23:00:10] 2026-05-01 20:59:29,548 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 23:00:10] 2026-05-01 20:59:29,550 | INFO     | job 7123425694 has completed (purged errors)
[2026-05-01 23:00:10] 2026-05-01 20:59:29,551 | INFO     | overall cleanup function is called
[2026-05-01 23:00:10] 2026-05-01 20:59:30,559 | INFO     | --- collectZombieJob: --- 10, [1890123]
[2026-05-01 23:00:10] 2026-05-01 20:59:30,559 | INFO     | zombie collector waiting for pid 1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:30,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 23:00:10] 2026-05-01 20:59:30,560 | INFO     | collected zombie processes
[2026-05-01 23:00:10] 2026-05-01 20:59:30,560 | INFO     | will attempt to kill all subprocesses of pid=1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:30,862 | INFO     | process IDs to be killed: [1890123] (in reverse order)
[2026-05-01 23:00:10] 2026-05-01 20:59:30,982 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 23:00:10] 2026-05-01 20:59:30,983 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 23:00:10] 2026-05-01 20:59:30,995 | INFO     | did not find any defunct processes belonging to 1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:31,007 | INFO     | did not find any defunct processes belonging to 1890123
[2026-05-01 23:00:10] 2026-05-01 20:59:31,007 | INFO     | Ready for new job
[2026-05-01 23:00:10] 2026-05-01 20:59:31,009 | INFO     | ***************************************
[2026-05-01 23:00:10] 2026-05-01 20:59:31,009 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 23:00:10] 2026-05-01 20:59:31,010 | INFO     | ***************************************
[2026-05-01 23:00:10] 2026-05-01 20:59:31,010 | INFO     | 
[2026-05-01 23:00:10] 2026-05-01 20:59:31,014 | INFO     | architecture information:
[2026-05-01 23:00:10] 2026-05-01 20:59:31,014 | INFO     | executing command: cat /etc/os-release
[2026-05-01 23:00:10] 2026-05-01 20:59:31,031 | INFO     | cat /etc/os-release:
[2026-05-01 23:00:10] NAME="CentOS Linux"
[2026-05-01 23:00:10] VERSION="7 (Core)"
[2026-05-01 23:00:10] ID="centos"
[2026-05-01 23:00:10] ID_LIKE="rhel fedora"
[2026-05-01 23:00:10] VERSION_ID="7"
[2026-05-01 23:00:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 23:00:10] ANSI_COLOR="0;31"
[2026-05-01 23:00:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 23:00:10] HOME_URL="https://www.centos.org/"
[2026-05-01 23:00:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 23:00:10] 
[2026-05-01 23:00:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 23:00:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 23:00:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 23:00:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 23:00:10] 
[2026-05-01 23:00:10] 2026-05-01 20:59:31,031 | INFO     | ***************************************
[2026-05-01 23:00:10] 2026-05-01 20:59:31,534 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/27
[2026-05-01 23:00:10] 2026-05-01 20:59:31,551 | INFO     | sufficient remaining disk space (28127002624 B)
[2026-05-01 23:00:10] 2026-05-01 20:59:31,551 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 23:00:10] 2026-05-01 20:59:31,551 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 23:00:10] 2026-05-01 20:59:31,552 | INFO     | update_server=False
[2026-05-01 23:00:10] 2026-05-01 20:59:31,552 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 23:00:10] 2026-05-01 20:59:31,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 23:00:10] 2026-05-01 20:59:31,693 | INFO     | job.realtimelogging is not enabled
[2026-05-01 23:00:10] 2026-05-01 20:59:31,911 | INFO     | all job control threads have been joined
[2026-05-01 23:00:10] 2026-05-01 20:59:32,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 23:00:10] 2026-05-01 20:59:32,026 | INFO     | aborting loop
[2026-05-01 23:00:10] 2026-05-01 20:59:32,316 | INFO     | all data control threads have been joined
[2026-05-01 23:00:10] 2026-05-01 20:59:32,557 | INFO     | [job] retrieve thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:32,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:32,913 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:32,917 | INFO     | [job] control thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:32,951 | INFO     | all payload control threads have been joined
[2026-05-01 23:00:10] 2026-05-01 20:59:32,984 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,032 | INFO     | [job] job monitor thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,182 | INFO     | [payload] failed_post thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,227 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,321 | INFO     | [data] control thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,499 | INFO     | [payload] validate_post thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,560 | INFO     | [data] copytool_out thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,771 | INFO     | [data] copytool_in thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,929 | INFO     | [job] validate thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:33,957 | INFO     | [payload] control thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:34,412 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 23:00:10] 2026-05-01 20:59:34,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 23:00:10] 2026-05-01 20:59:35,418 | INFO     | [job] queue monitor thread has finished
[2026-05-01 23:00:10] 2026-05-01 20:59:38,651 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 23:00:10] 2026-05-01 21:00:01,614 | INFO     | PID=1884959 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 23:00:10] 2026-05-01 21:00:01,614 | INFO     | .. there are 14 such processes running
[2026-05-01 23:00:10] 2026-05-01 21:00:01,618 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 23:00:10] 2026-05-01 21:00:01,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 23:00:10] 2026-05-01 21:00:01,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 23:00:10] 2026-05-01 21:00:03,883 | INFO     | [monitor] cgroup control has ended
[2026-05-01 23:00:10] 2026-05-01 21:00:05,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23195395934016)>', '<ExcThread(monitor, started 23195073578752)>']
[2026-05-01 23:00:10] 2026-05-01 21:00:05,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 23:00:10] 2026-05-01 21:00:05,642 | INFO     | [monitor] control thread has ended
[2026-05-01 23:00:10] 2026-05-01 21:00:10,398 | INFO     | all workflow threads have been joined
[2026-05-01 23:00:10] 2026-05-01 21:00:10,398 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 23:00:10] 2026-05-01 21:00:10,398 | INFO     | traces error code: 0
[2026-05-01 23:00:10] 2026-05-01 21:00:10,399 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 23:00:10] 2026-05-01 21:00:10,546 [wrapper] ==== pilot stdout END ====
[2026-05-01 23:00:10] 2026-05-01 21:00:10,549 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 23:00:10] 2026-05-01 21:00:10,553 [wrapper] pilotpid: 1884959
[2026-05-01 23:00:10] 2026-05-01 21:00:10,556 [wrapper] Pilot exit status: 0
[2026-05-01 23:00:10] 2026-05-01 21:00:10,572 [wrapper] pandaids: 7123425694
[2026-05-01 23:00:10] 2026-05-01 21:00:10,666 [wrapper] cleanup supervisor_pilot 2116046 1884960
[2026-05-01 23:00:10] 2026-05-01 21:00:10,673 [wrapper] Test setup, not cleaning
[2026-05-01 23:00:10] 2026-05-01 21:00:10,677 [wrapper] apfmon messages muted
[2026-05-01 23:00:10] 2026-05-01 21:00:10,682 [wrapper] ==== wrapper stdout END ====
[2026-05-01 23:00:10] 2026-05-01 21:00:10,685 [wrapper] ==== wrapper stderr END ====
[2026-05-01 23:00:10]  *** Error codes and diagnostics ***
[2026-05-01 23:00:10]     "exeErrorCode": 0,
[2026-05-01 23:00:10]     "pilotErrorCode": 0,
[2026-05-01 23:00:10]  *** Listing of results directory ***
[2026-05-01 23:00:10] total 453540
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc    683926 May  1 05:51 pilot3.tar.gz
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc      5631 May  1 05:51 queuedata.json
[2026-05-01 23:00:10] -rwx------. 1 boinc boinc     36322 May  1 05:51 runpilot2-wrapper.sh
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc       100 May  1 19:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 23:00:10] -rwxr-xr-x. 1 boinc boinc      7986 May  1 19:16 run_atlas
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc       105 May  1 19:16 job.xml
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc 301760185 May  1 19:16 EVNT.50017000._000003.pool.root.1
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc     15667 May  1 19:16 start_atlas.sh
[2026-05-01 23:00:10] drwxrwx--x. 2 boinc boinc      4096 May  1 19:16 shared
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc    697396 May  1 19:16 input.tar.gz
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc         0 May  1 19:16 boinc_lockfile
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc      2516 May  1 19:16 pandaJob.out
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc   1003051 May  1 19:18 agis_schedconf.cvmfs.json
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc       447 May  1 19:18 workernode_map.json
[2026-05-01 23:00:10] drwx------. 5 boinc boinc      4096 May  1 19:18 pilot3
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc      6488 May  1 20:17 init_data.xml
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc 155391186 May  1 22:58 HITS.50017005._000745.pool.root.1
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc       489 May  1 22:58 boinc_task_state.xml
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc      1035 May  1 22:59 memory_monitor_summary.json
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc   1508687 May  1 22:59 agis_ddmendpoints.agis.ALL.json
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc    335939 May  1 22:59 log.50017005._000745.job.log.tgz.1
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc      6417 May  1 22:59 heartbeat_new.json
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc      6308 May  1 22:59 heartbeat.json
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc        28 May  1 22:59 wrapper_checkpoint.txt
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc      8192 May  1 22:59 boinc_mmap_file
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc        95 May  1 23:00 pilot_heartbeat.json
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc      4905 May  1 23:00 pilotlog.txt
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc   1228946 May  1 23:00 log.50017005._000745.job.log.1
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc       357 May  1 23:00 output.list
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc       410 May  1 23:00 runtime_log
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc   1587200 May  1 23:00 result.tar.gz
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc      8845 May  1 23:00 runtime_log.err
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc       664 May  1 23:00 2335222f4682.diag
[2026-05-01 23:00:10] -rw-r--r--. 1 boinc boinc     21054 May  1 23:00 stderr.txt
[2026-05-01 23:00:10] HITS file was successfully produced:
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc 155391186 May  1 22:58 shared/HITS.pool.root.1
[2026-05-01 23:00:10]  *** Contents of shared directory: ***
[2026-05-01 23:00:10] total 448696
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc 301760185 May  1 19:16 ATLAS.root_0
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc     15667 May  1 19:16 start_atlas.sh
[2026-05-01 23:00:10] -rw-r--r--. 2 boinc boinc    697396 May  1 19:16 input.tar.gz
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc 155391186 May  1 22:58 HITS.pool.root.1
[2026-05-01 23:00:10] -rw-------. 1 boinc boinc   1587200 May  1 23:00 result.tar.gz
23:00:11 (1880830): run_atlas exited; CPU time 34428.696259
23:00:11 (1880830): called boinc_finish(0)

</stderr_txt>
]]>

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