Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:56:17 (1208577): wrapper (7.7.26015): starting
10:56:17 (1208577): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 10:56:17] Arguments: --nthreads 4
[2026-05-01 10:56:17] Threads: 4
[2026-05-01 10:56:17] Checking for CVMFS
[2026-05-01 10:56:17] No cvmfs_config command found, will try listing directly
[2026-05-01 10:56:17] CVMFS is ok
[2026-05-01 10:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 10:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 10:56:17] Further information can be found at the LHC@home message board.
[2026-05-01 10:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 10:56:17] Checking for apptainer binary...
[2026-05-01 10:56:17] which: no apptainer in ((null))
[2026-05-01 10:56:17] apptainer is not installed, using version from CVMFS
[2026-05-01 10:56:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 10:56:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-05-01 10:56:17] apptainer works
[2026-05-01 10:56:17] Set ATHENA_PROC_NUMBER=4
[2026-05-01 10:56:17] Set ATHENA_CORE_NUMBER=4
[2026-05-01 10:56:17] Starting ATLAS job with PandaID=7123014197
[2026-05-01 10:56:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 15:31:01]  *** The last 200 lines of the pilot log: ***
[2026-05-01 15:31:01] 2026-05-01 13:30:13,690 | INFO     | monitor loop #1185: job 0:7123014197 is in state 'finished'
[2026-05-01 15:31:01] 2026-05-01 13:30:13,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 15:31:01] 2026-05-01 13:30:14,630 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 15:31:01] 2026-05-01 13:30:15,603 | INFO     | job 7123014197 has state=finished
[2026-05-01 15:31:01] 2026-05-01 13:30:15,603 | INFO     | preparing for final server update for job 7123014197 in state='finished'
[2026-05-01 15:31:01] 2026-05-01 13:30:15,604 | INFO     | reading metadata from: /var/lib/boinc/var/slot12/slots/11/PanDA_Pilot-7123014197/jobReport.json
[2026-05-01 15:31:01] 2026-05-01 13:30:15,607 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot12/slots/11/workernode_map.json
[2026-05-01 15:31:01] 2026-05-01 13:30:15,607 | INFO     | this job has now completed (state=finished)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,607 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,607 | INFO     | log transfer has been attempted: DONE
[2026-05-01 15:31:01] 2026-05-01 13:30:15,607 | INFO     | job 7123014197 has finished - writing final server update
[2026-05-01 15:31:01] 2026-05-01 13:30:15,608 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3958875/.job.ad'
[2026-05-01 15:31:01] 2026-05-01 13:30:15,608 | INFO     | total number of processed events: 400 (read)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,621 | INFO     | using path: /var/lib/boinc/var/slot12/slots/11/PanDA_Pilot-7123014197/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,621 | INFO     | extracted standard info from prmon json
[2026-05-01 15:31:01] 2026-05-01 13:30:15,621 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 15:31:01] 2026-05-01 13:30:15,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 15:31:01] 2026-05-01 13:30:15,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 15:31:01] 2026-05-01 13:30:15,626 | INFO     | fitting pss+swap vs Time
[2026-05-01 15:31:01] 2026-05-01 13:30:15,627 | INFO     | sum of square deviations: 6035722470.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,629 | INFO     | sum of deviations: 36697292071.999954
[2026-05-01 15:31:01] 2026-05-01 13:30:15,629 | INFO     | mean x (centered): 0.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,629 | INFO     | mean y: 2329041.31598513
[2026-05-01 15:31:01] 2026-05-01 13:30:15,629 | INFO     | intersect: 2329041.31598513
[2026-05-01 15:31:01] 2026-05-01 13:30:15,630 | INFO     | chi2: 1.0723452435027538
[2026-05-01 15:31:01] 2026-05-01 13:30:15,630 | INFO     | sum of square deviations: 5705372090.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,632 | INFO     | sum of deviations: 35731551570.500015
[2026-05-01 15:31:01] 2026-05-01 13:30:15,632 | INFO     | mean x (centered): 0.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,632 | INFO     | mean y: 2328595.5795454546
[2026-05-01 15:31:01] 2026-05-01 13:30:15,633 | INFO     | intersect: 2328595.5795454546
[2026-05-01 15:31:01] 2026-05-01 13:30:15,633 | INFO     | chi2: 1.0725852132419165
[2026-05-01 15:31:01] 2026-05-01 13:30:15,634 | INFO     | current chi2=1.0725852132419165 (change=-0.022378029894437657 %)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,634 | INFO     | right removable region: 263
[2026-05-01 15:31:01] 2026-05-01 13:30:15,634 | INFO     | sum of square deviations: 5705372090.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,636 | INFO     | sum of deviations: 10581672806.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,636 | INFO     | mean x (centered): 0.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,636 | INFO     | mean y: 2340956.492424242
[2026-05-01 15:31:01] 2026-05-01 13:30:15,636 | INFO     | intersect: 2340956.492424242
[2026-05-01 15:31:01] 2026-05-01 13:30:15,637 | INFO     | chi2: 0.000939461834996872
[2026-05-01 15:31:01] 2026-05-01 13:30:15,637 | INFO     | current chi2=0.000939461834996872 (change=99.91239184948233 %)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,637 | INFO     | sum of square deviations: 5387301010.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,639 | INFO     | sum of deviations: 10135893711.999996
[2026-05-01 15:31:01] 2026-05-01 13:30:15,639 | INFO     | mean x (centered): 0.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,639 | INFO     | mean y: 2341170.2123552123
[2026-05-01 15:31:01] 2026-05-01 13:30:15,639 | INFO     | intersect: 2341170.2123552123
[2026-05-01 15:31:01] 2026-05-01 13:30:15,640 | INFO     | chi2: 0.0009237838089233667
[2026-05-01 15:31:01] 2026-05-01 13:30:15,640 | INFO     | current chi2=0.0009237838089233667 (change=1.668830546326293 %)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,640 | INFO     | left removable region: 10
[2026-05-01 15:31:01] 2026-05-01 13:30:15,640 | INFO     | sum of square deviations: 5021496942.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,642 | INFO     | sum of deviations: 9609290411.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,642 | INFO     | mean x (centered): 0.0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,642 | INFO     | mean y: 2340907.0039525693
[2026-05-01 15:31:01] 2026-05-01 13:30:15,642 | INFO     | intersect: 2340907.0039525693
[2026-05-01 15:31:01] 2026-05-01 13:30:15,643 | INFO     | chi2: 0.0009088566903030594
[2026-05-01 15:31:01] 2026-05-01 13:30:15,643 | INFO     | current memory leak: 1.91 B/s (using 253 data points, chi2=0.00)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,643 | INFO     | could have reported an average CPU frequency of 3149 MHz (13 samples)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | ..............................
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . Timing measurements:
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . get job = 0 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . initial setup = 3 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . payload setup = 6 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . stage-in = 0 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . payload execution = 16403 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . stage-out = 1 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | . log creation = 0 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,644 | INFO     | ..............................
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | 
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | job summary report
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | --------------------------------------------------
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | PanDA job id: 7123014197
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | task id: 50017180
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | errors: (none)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | pilot state: finished 
[2026-05-01 15:31:01] 2026-05-01 13:30:15,735 | INFO     | transexitcode: 0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | exeerrorcode: 0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | exeerrordiag: 
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | exitcode: 0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | exitmsg: OK
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | cpuconsumptiontime: 61785 s
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | nevents: 400
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | neventsw: 0
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | pid: 1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | pgrp: 1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | corecount: 4
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | event service: False
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | sizes: {0: 2278314, 10: 2278314, 16413: 2309809, 16414: 2309808, 16416: 2319160, 16417: 2319216, 16418: 2319538}
[2026-05-01 15:31:01] 2026-05-01 13:30:15,736 | INFO     | --------------------------------------------------
[2026-05-01 15:31:01] 2026-05-01 13:30:15,737 | INFO     | 
[2026-05-01 15:31:01] 2026-05-01 13:30:15,737 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/11
[2026-05-01 15:31:01] 2026-05-01 13:30:15,759 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 15:31:01] 2026-05-01 13:30:15,761 | INFO     | job 7123014197 has completed (purged errors)
[2026-05-01 15:31:01] 2026-05-01 13:30:15,762 | INFO     | overall cleanup function is called
[2026-05-01 15:31:01] 2026-05-01 13:30:16,770 | INFO     | --- collectZombieJob: --- 10, [1217189]
[2026-05-01 15:31:01] 2026-05-01 13:30:16,770 | INFO     | zombie collector waiting for pid 1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:16,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 15:31:01] 2026-05-01 13:30:16,770 | INFO     | collected zombie processes
[2026-05-01 15:31:01] 2026-05-01 13:30:16,770 | INFO     | will attempt to kill all subprocesses of pid=1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:17,063 | INFO     | process IDs to be killed: [1217189] (in reverse order)
[2026-05-01 15:31:01] 2026-05-01 13:30:17,167 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 15:31:01] 2026-05-01 13:30:17,167 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 15:31:01] 2026-05-01 13:30:17,176 | INFO     | did not find any defunct processes belonging to 1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:17,184 | INFO     | did not find any defunct processes belonging to 1217189
[2026-05-01 15:31:01] 2026-05-01 13:30:17,184 | INFO     | Ready for new job
[2026-05-01 15:31:01] 2026-05-01 13:30:17,186 | INFO     | ***************************************
[2026-05-01 15:31:01] 2026-05-01 13:30:17,186 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 15:31:01] 2026-05-01 13:30:17,186 | INFO     | ***************************************
[2026-05-01 15:31:01] 2026-05-01 13:30:17,186 | INFO     | 
[2026-05-01 15:31:01] 2026-05-01 13:30:17,190 | INFO     | architecture information:
[2026-05-01 15:31:01] 2026-05-01 13:30:17,191 | INFO     | executing command: cat /etc/os-release
[2026-05-01 15:31:01] 2026-05-01 13:30:17,207 | INFO     | cat /etc/os-release:
[2026-05-01 15:31:01] NAME="CentOS Linux"
[2026-05-01 15:31:01] VERSION="7 (Core)"
[2026-05-01 15:31:01] ID="centos"
[2026-05-01 15:31:01] ID_LIKE="rhel fedora"
[2026-05-01 15:31:01] VERSION_ID="7"
[2026-05-01 15:31:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 15:31:01] ANSI_COLOR="0;31"
[2026-05-01 15:31:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 15:31:01] HOME_URL="https://www.centos.org/"
[2026-05-01 15:31:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 15:31:01] 
[2026-05-01 15:31:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 15:31:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 15:31:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 15:31:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 15:31:01] 
[2026-05-01 15:31:01] 2026-05-01 13:30:17,207 | INFO     | ***************************************
[2026-05-01 15:31:01] 2026-05-01 13:30:17,710 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/11
[2026-05-01 15:31:01] 2026-05-01 13:30:17,732 | INFO     | sufficient remaining disk space (28248637440 B)
[2026-05-01 15:31:01] 2026-05-01 13:30:17,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 15:31:01] 2026-05-01 13:30:17,732 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 15:31:01] 2026-05-01 13:30:17,733 | INFO     | update_server=False
[2026-05-01 15:31:01] 2026-05-01 13:30:17,733 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 15:31:01] 2026-05-01 13:30:17,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:31:01] 2026-05-01 13:30:17,733 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 15:31:01] 2026-05-01 13:30:17,733 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:31:01] 2026-05-01 13:30:17,734 | INFO     | aborting loop
[2026-05-01 15:31:01] 2026-05-01 13:30:18,041 | INFO     | all job control threads have been joined
[2026-05-01 15:31:01] 2026-05-01 13:30:18,519 | INFO     | all payload control threads have been joined
[2026-05-01 15:31:01] 2026-05-01 13:30:18,632 | INFO     | all data control threads have been joined
[2026-05-01 15:31:01] 2026-05-01 13:30:18,738 | INFO     | [job] retrieve thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:18,738 | INFO     | [job] queue monitor thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:18,739 | INFO     | [job] job monitor thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,046 | INFO     | [job] control thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,372 | INFO     | [job] validate thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,377 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,524 | INFO     | [payload] control thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,638 | INFO     | [data] control thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,640 | INFO     | [payload] validate_post thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,739 | INFO     | [data] copytool_out thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,756 | INFO     | [data] copytool_in thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:19,812 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:20,109 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:20,110 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:20,327 | INFO     | [payload] failed_post thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:20,727 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 15:31:01] 2026-05-01 13:30:24,733 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 15:31:01] 2026-05-01 13:30:49,018 | INFO     | PID=1212367 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 15:31:01] 2026-05-01 13:30:49,018 | INFO     | .. there are 14 such processes running
[2026-05-01 15:31:01] 2026-05-01 13:30:49,018 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 15:31:01] 2026-05-01 13:30:49,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 15:31:01] 2026-05-01 13:30:49,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 15:31:01] 2026-05-01 13:30:54,702 | INFO     | [monitor] cgroup control has ended
[2026-05-01 15:31:01] 2026-05-01 13:30:55,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22361013389120)>', '<ExcThread(monitor, started 22360775468800)>']
[2026-05-01 15:31:01] 2026-05-01 13:30:56,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 15:31:01] 2026-05-01 13:30:56,054 | INFO     | [monitor] control thread has ended
[2026-05-01 15:31:01] 2026-05-01 13:31:00,910 | INFO     | all workflow threads have been joined
[2026-05-01 15:31:01] 2026-05-01 13:31:00,910 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 15:31:01] 2026-05-01 13:31:00,910 | INFO     | traces error code: 0
[2026-05-01 15:31:01] 2026-05-01 13:31:00,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 15:31:01] 2026-05-01 13:31:01,087 [wrapper] ==== pilot stdout END ====
[2026-05-01 15:31:01] 2026-05-01 13:31:01,090 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 15:31:01] 2026-05-01 13:31:01,092 [wrapper] pilotpid: 1212367
[2026-05-01 15:31:01] 2026-05-01 13:31:01,095 [wrapper] Pilot exit status: 0
[2026-05-01 15:31:01] 2026-05-01 13:31:01,106 [wrapper] pandaids: 7123014197
[2026-05-01 15:31:01] 2026-05-01 13:31:01,175 [wrapper] cleanup supervisor_pilot 1551047 1212368
[2026-05-01 15:31:01] 2026-05-01 13:31:01,179 [wrapper] Test setup, not cleaning
[2026-05-01 15:31:01] 2026-05-01 13:31:01,181 [wrapper] apfmon messages muted
[2026-05-01 15:31:01] 2026-05-01 13:31:01,184 [wrapper] ==== wrapper stdout END ====
[2026-05-01 15:31:01] 2026-05-01 13:31:01,187 [wrapper] ==== wrapper stderr END ====
[2026-05-01 15:31:01]  *** Error codes and diagnostics ***
[2026-05-01 15:31:01]     "exeErrorCode": 0,
[2026-05-01 15:31:01]     "pilotErrorCode": 0,
[2026-05-01 15:31:01]  *** Listing of results directory ***
[2026-05-01 15:31:01] total 498992
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc    683926 May  1 01:29 pilot3.tar.gz
[2026-05-01 15:31:01] -rwx------. 1 boinc boinc     36322 May  1 01:32 runpilot2-wrapper.sh
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc      5631 May  1 01:32 queuedata.json
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc       100 May  1 10:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 15:31:01] -rwxr-xr-x. 1 boinc boinc      7986 May  1 10:56 run_atlas
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc       105 May  1 10:56 job.xml
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc      6481 May  1 10:56 init_data.xml
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc 320672775 May  1 10:56 EVNT.50017178._000033.pool.root.1
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc     15667 May  1 10:56 start_atlas.sh
[2026-05-01 15:31:01] drwxrwx--x. 2 boinc boinc      4096 May  1 10:56 shared
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc    697396 May  1 10:56 input.tar.gz
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc         0 May  1 10:56 boinc_lockfile
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc      2517 May  1 10:56 pandaJob.out
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc   1002922 May  1 10:56 agis_schedconf.cvmfs.json
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc       448 May  1 10:56 workernode_map.json
[2026-05-01 15:31:01] drwx------. 5 boinc boinc      4096 May  1 10:56 pilot3
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc 182431680 May  1 15:29 HITS.50017180._000804.pool.root.1
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc       488 May  1 15:29 boinc_task_state.xml
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc      1035 May  1 15:30 memory_monitor_summary.json
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc   1508687 May  1 15:30 agis_ddmendpoints.agis.ALL.json
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc    345466 May  1 15:30 log.50017180._000804.job.log.tgz.1
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc      6411 May  1 15:30 heartbeat_new.json
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc      6302 May  1 15:30 heartbeat.json
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc        95 May  1 15:30 pilot_heartbeat.json
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc        28 May  1 15:30 wrapper_checkpoint.txt
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc      8192 May  1 15:30 boinc_mmap_file
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc      4833 May  1 15:31 pilotlog.txt
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc   1519489 May  1 15:31 log.50017180._000804.job.log.1
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc       357 May  1 15:31 output.list
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc       410 May  1 15:31 runtime_log
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc   1884160 May  1 15:31 result.tar.gz
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc      8845 May  1 15:31 runtime_log.err
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc       666 May  1 15:31 e67b40562fcb.diag
[2026-05-01 15:31:01] -rw-r--r--. 1 boinc boinc     21121 May  1 15:31 stderr.txt
[2026-05-01 15:31:01] HITS file was successfully produced:
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc 182431680 May  1 15:29 shared/HITS.pool.root.1
[2026-05-01 15:31:01]  *** Contents of shared directory: ***
[2026-05-01 15:31:01] total 493860
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc 320672775 May  1 10:56 ATLAS.root_0
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc     15667 May  1 10:56 start_atlas.sh
[2026-05-01 15:31:01] -rw-r--r--. 2 boinc boinc    697396 May  1 10:56 input.tar.gz
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc 182431680 May  1 15:29 HITS.pool.root.1
[2026-05-01 15:31:01] -rw-------. 1 boinc boinc   1884160 May  1 15:31 result.tar.gz
15:31:02 (1208577): run_atlas exited; CPU time 62376.288890
15:31:02 (1208577): called boinc_finish(0)

</stderr_txt>
]]>

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