Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:39 (2213879): wrapper (7.7.26015): starting
00:05:39 (2213879): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 00:05:39] Arguments: --nthreads 8
[2026-05-01 00:05:39] Threads: 8
[2026-05-01 00:05:39] Checking for CVMFS
[2026-05-01 00:05:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 00:05:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 00:05:40] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 00:05:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 00:05:40] 2.13.3.0 7695 855 101680 159076 1 252 13291692 21042177 20786 16776704 0 2182094 98.879 6138272 25319 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-01 00:05:40] CVMFS is ok
[2026-05-01 00:05:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 00:05:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 00:05:40] Further information can be found at the LHC@home message board.
[2026-05-01 00:05:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 00:05:40] Checking for apptainer binary...
[2026-05-01 00:05:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 00:05:40] Running /usr/bin/apptainer --version
[2026-05-01 00:05:40] apptainer version 1.4.5-3.el9
[2026-05-01 00:05:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 00:05:41] c-16-16.aglt2.org
[2026-05-01 00:05:41] apptainer works
[2026-05-01 00:05:41] Set ATHENA_PROC_NUMBER=8
[2026-05-01 00:05:41] Set ATHENA_CORE_NUMBER=8
[2026-05-01 00:05:42] Starting ATLAS job with PandaID=7123132629
[2026-05-01 00:05:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 00:04:30]  *** The last 200 lines of the pilot log: ***
[2026-05-02 00:04:30] 2026-05-01 22:50:03,623 | INFO     | preparing for final server update for job 7123132629 in state='finished'
[2026-05-02 00:04:30] 2026-05-01 22:50:03,627 | INFO     | reading metadata from: /tmp/boinchome/slots/3/PanDA_Pilot-7123132629/jobReport.json
[2026-05-02 00:04:30] 2026-05-01 22:50:03,672 | INFO     | monitor loop #3546: job 0:7123132629 is in state 'finished'
[2026-05-02 00:04:30] 2026-05-01 22:50:03,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-02 00:04:30] 2026-05-01 22:50:03,673 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/3/workernode_map.json
[2026-05-02 00:04:30] 2026-05-01 22:50:03,674 | INFO     | this job has now completed (state=finished)
[2026-05-02 00:04:30] 2026-05-01 22:50:03,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 00:04:30] 2026-05-01 22:50:03,674 | INFO     | log transfer has been attempted: DONE
[2026-05-02 00:04:30] 2026-05-01 22:50:03,674 | INFO     | job 7123132629 has finished - writing final server update
[2026-05-02 00:04:30] 2026-05-01 22:50:03,675 | INFO     | total number of processed events: 400 (read)
[2026-05-02 00:04:30] 2026-05-01 22:50:03,697 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7123132629/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 00:04:30] 2026-05-01 22:50:03,701 | INFO     | extracted standard info from prmon json
[2026-05-02 00:04:30] 2026-05-01 22:50:03,702 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 00:04:30] 2026-05-01 22:50:03,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 00:04:30] 2026-05-01 22:50:03,702 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 00:04:30] 2026-05-01 22:50:03,770 | INFO     | fitting pss+swap vs Time
[2026-05-02 00:04:30] 2026-05-01 22:50:03,772 | INFO     | sum of square deviations: 416093459416.61096
[2026-05-02 00:04:30] 2026-05-01 22:50:03,908 | INFO     | sum of deviations: 546120347397.02783
[2026-05-02 00:04:30] 2026-05-01 22:50:03,908 | INFO     | mean x (centered): 0.0
[2026-05-02 00:04:30] 2026-05-01 22:50:03,908 | INFO     | mean y: 2533627.7262012693
[2026-05-02 00:04:30] 2026-05-01 22:50:03,909 | INFO     | intersect: 2533627.7262012693
[2026-05-02 00:04:30] 2026-05-01 22:50:03,924 | INFO     | chi2: 3.4179205736490568
[2026-05-02 00:04:30] 2026-05-01 22:50:03,926 | INFO     | sum of square deviations: 410460561881.54065
[2026-05-02 00:04:30] 2026-05-01 22:50:04,302 | INFO     | sum of deviations: 613764235607.147
[2026-05-02 00:04:30] 2026-05-01 22:50:04,303 | INFO     | mean x (centered): 0.0
[2026-05-02 00:04:30] 2026-05-01 22:50:04,303 | INFO     | mean y: 2535451.9535519127
[2026-05-02 00:04:30] 2026-05-01 22:50:04,303 | INFO     | intersect: 2535451.9535519127
[2026-05-02 00:04:30] 2026-05-01 22:50:04,331 | INFO     | chi2: 2.721900337524917
[2026-05-02 00:04:30] 2026-05-01 22:50:04,332 | INFO     | current chi2=2.721900337524917 (change=20.36385050870422 %)
[2026-05-02 00:04:30] 2026-05-01 22:50:04,332 | INFO     | right removable region: 1097
[2026-05-02 00:04:30] 2026-05-01 22:50:04,408 | INFO     | sum of square deviations: 410460147630.97815
[2026-05-02 00:04:30] 2026-05-01 22:50:04,543 | INFO     | sum of deviations: 269828650327.29486
[2026-05-02 00:04:30] 2026-05-01 22:50:04,543 | INFO     | mean x (centered): 0.0
[2026-05-02 00:04:30] 2026-05-01 22:50:04,543 | INFO     | mean y: 2541099.747723133
[2026-05-02 00:04:30] 2026-05-01 22:50:04,544 | INFO     | intersect: 2541099.747723133
[2026-05-02 00:04:30] 2026-05-01 22:50:04,546 | INFO     | chi2: 0.9769992071215027
[2026-05-02 00:04:30] 2026-05-01 22:50:04,546 | INFO     | current chi2=0.9769992071215027 (change=71.41539172519641 %)
[2026-05-02 00:04:30] 2026-05-01 22:50:04,550 | INFO     | sum of square deviations: 404877907058.3311
[2026-05-02 00:04:30] 2026-05-01 22:50:04,638 | INFO     | sum of deviations: 199028058199.74673
[2026-05-02 00:04:30] 2026-05-01 22:50:04,639 | INFO     | mean x (centered): 0.0
[2026-05-02 00:04:30] 2026-05-01 22:50:04,639 | INFO     | mean y: 2543032.3357731015
[2026-05-02 00:04:30] 2026-05-01 22:50:04,639 | INFO     | intersect: 2543032.3357731015
[2026-05-02 00:04:30] 2026-05-01 22:50:04,641 | INFO     | chi2: 0.8333100304831633
[2026-05-02 00:04:30] 2026-05-01 22:50:04,641 | INFO     | current chi2=0.8333100304831633 (change=14.707194805376103 %)
[2026-05-02 00:04:30] 2026-05-01 22:50:04,641 | INFO     | left removable region: 10
[2026-05-02 00:04:30] 2026-05-01 22:50:04,644 | INFO     | sum of square deviations: 398246800063.2031
[2026-05-02 00:04:30] 2026-05-01 22:50:04,719 | INFO     | sum of deviations: 267079373024.14862
[2026-05-02 00:04:30] 2026-05-01 22:50:04,719 | INFO     | mean x (centered): 0.0
[2026-05-02 00:04:30] 2026-05-01 22:50:04,719 | INFO     | mean y: 2544901.323827047
[2026-05-02 00:04:30] 2026-05-01 22:50:04,719 | INFO     | intersect: 2544901.323827047
[2026-05-02 00:04:30] 2026-05-01 22:50:04,726 | INFO     | chi2: 0.13182946197872938
[2026-05-02 00:04:30] 2026-05-01 22:50:04,726 | INFO     | current memory leak: 0.67 B/s (using 1087 data points, chi2=0.13)
[2026-05-02 00:04:30] 2026-05-01 22:50:04,728 | INFO     | could have reported an average CPU frequency of 2899 MHz (41 samples)
[2026-05-02 00:04:30] 2026-05-01 22:50:04,728 | INFO     | ..............................
[2026-05-02 00:04:30] 2026-05-01 22:50:04,728 | INFO     | . Timing measurements:
[2026-05-02 00:04:30] 2026-05-01 22:50:04,728 | INFO     | . get job = 1 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,728 | INFO     | . initial setup = 23 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | . payload setup = 45 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | . stage-in = 0 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | . payload execution = 67307 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | . stage-out = 8 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | . log creation = 1 s
[2026-05-02 00:04:30] 2026-05-01 22:50:04,729 | INFO     | ..............................
[2026-05-02 00:04:30] 2026-05-01 22:50:05,293 | INFO     | 
[2026-05-02 00:04:30] 2026-05-01 22:50:05,294 | INFO     | job summary report
[2026-05-02 00:04:30] 2026-05-01 22:50:05,294 | INFO     | --------------------------------------------------
[2026-05-02 00:04:30] 2026-05-01 22:50:05,294 | INFO     | PanDA job id: 7123132629
[2026-05-02 00:04:30] 2026-05-01 22:50:05,294 | INFO     | task id: 50017123
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | errors: (none)
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | pilot state: finished 
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | transexitcode: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | exeerrorcode: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | exeerrordiag: 
[2026-05-02 00:04:30] 2026-05-01 22:50:05,295 | INFO     | exitcode: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | exitmsg: OK
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | cpuconsumptiontime: 94694 s
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | nevents: 400
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | neventsw: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | pid: 2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | pgrp: 2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:05,296 | INFO     | corecount: 8
[2026-05-02 00:04:30] 2026-05-01 22:50:05,302 | INFO     | event service: False
[2026-05-02 00:04:30] 2026-05-01 22:50:05,302 | INFO     | sizes: {0: 2275850, 2: 2276451, 3: 2276563, 4: 2276818, 6: 2278392, 15: 2278420, 67358: 2332659, 67359: 2332658, 67370: 2341986, 67373: 2342042, 67376: 2342332}
[2026-05-02 00:04:30] 2026-05-01 22:50:05,302 | INFO     | --------------------------------------------------
[2026-05-02 00:04:30] 2026-05-01 22:50:05,302 | INFO     | 
[2026-05-02 00:04:30] 2026-05-01 22:50:05,303 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-05-02 00:04:30] 2026-05-01 22:50:05,626 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,626 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,626 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,626 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,627 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,628 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,629 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 00:04:30] 2026-05-01 22:50:05,629 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,629 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 00:04:30] 2026-05-01 22:50:05,629 | INFO     | job 7123132629 has completed (purged errors)
[2026-05-02 00:04:30] 2026-05-01 22:50:05,629 | INFO     | overall cleanup function is called
[2026-05-02 00:04:30] 2026-05-01 22:50:06,260 | INFO     | PID=2220939 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-02 00:04:30] 2026-05-01 22:50:06,282 | INFO     | .. there are 26 such processes running
[2026-05-02 00:04:30] 2026-05-01 22:50:06,650 | INFO     | --- collectZombieJob: --- 10, [2231232]
[2026-05-02 00:04:30] 2026-05-01 22:50:06,650 | INFO     | zombie collector waiting for pid 2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:06,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 00:04:30] 2026-05-01 22:50:06,650 | INFO     | collected zombie processes
[2026-05-02 00:04:30] 2026-05-01 22:50:06,650 | INFO     | will attempt to kill all subprocesses of pid=2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:08,166 | INFO     | process IDs to be killed: [2231232] (in reverse order)
[2026-05-02 00:04:30] 2026-05-01 22:50:08,795 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 00:04:30] 2026-05-01 22:50:08,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 00:04:30] 2026-05-01 22:50:08,934 | INFO     | did not find any defunct processes belonging to 2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:09,189 | INFO     | did not find any defunct processes belonging to 2231232
[2026-05-02 00:04:30] 2026-05-01 22:50:09,189 | INFO     | Ready for new job
[2026-05-02 00:04:30] 2026-05-01 22:50:09,304 | INFO     | ***************************************
[2026-05-02 00:04:30] 2026-05-01 22:50:09,305 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 00:04:30] 2026-05-01 22:50:09,305 | INFO     | ***************************************
[2026-05-02 00:04:30] 2026-05-01 22:50:09,305 | INFO     | 
[2026-05-02 00:04:30] 2026-05-01 22:50:09,307 | INFO     | architecture information:
[2026-05-02 00:04:30] 2026-05-01 22:50:09,382 | INFO     | executing command: cat /etc/os-release
[2026-05-02 00:04:30] 2026-05-01 22:50:09,418 | INFO     | cat /etc/os-release:
[2026-05-02 00:04:30] NAME="CentOS Linux"
[2026-05-02 00:04:30] VERSION="7 (Core)"
[2026-05-02 00:04:30] ID="centos"
[2026-05-02 00:04:30] ID_LIKE="rhel fedora"
[2026-05-02 00:04:30] VERSION_ID="7"
[2026-05-02 00:04:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 00:04:30] ANSI_COLOR="0;31"
[2026-05-02 00:04:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 00:04:30] HOME_URL="https://www.centos.org/"
[2026-05-02 00:04:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 00:04:30] 
[2026-05-02 00:04:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 00:04:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 00:04:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 00:04:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 00:04:30] 
[2026-05-02 00:04:30] 2026-05-01 22:50:09,418 | INFO     | ***************************************
[2026-05-02 00:04:30] 2026-05-01 22:50:09,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-05-02 00:04:30] 2026-05-01 22:50:10,048 | INFO     | sufficient remaining disk space (52873396224 B)
[2026-05-02 00:04:30] 2026-05-01 22:50:10,048 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 00:04:30] 2026-05-01 22:50:10,049 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 00:04:30] 2026-05-01 22:50:10,049 | INFO     | update_server=False
[2026-05-02 00:04:30] 2026-05-01 22:50:10,049 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 00:04:30] 2026-05-01 22:50:10,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 00:04:30] 2026-05-01 22:50:10,050 | INFO     | aborting loop
[2026-05-02 00:04:30] 2026-05-01 22:50:10,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 00:04:30] 2026-05-01 22:50:10,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 00:04:30] 2026-05-01 22:50:10,533 | INFO     | all data control threads have been joined
[2026-05-02 00:04:30] 2026-05-01 22:50:10,958 | INFO     | all payload control threads have been joined
[2026-05-02 00:04:30] 2026-05-01 22:50:11,067 | INFO     | [job] queue monitor thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,074 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,077 | INFO     | [job] retrieve thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,100 | INFO     | [job] job monitor thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,154 | INFO     | all job control threads have been joined
[2026-05-02 00:04:30] 2026-05-01 22:50:11,545 | INFO     | [data] control thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,874 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,915 | INFO     | [job] validate thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:11,972 | INFO     | [payload] control thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,080 | INFO     | [data] copytool_out thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,119 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,128 | INFO     | [data] copytool_in thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,132 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,160 | INFO     | [job] control thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 00:04:30] 2026-05-01 22:50:12,285 | INFO     | [payload] failed_post thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:12,488 | INFO     | [payload] validate_post thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:14,976 | INFO     | [monitor] cgroup control has ended
[2026-05-02 00:04:30] 2026-05-01 22:50:16,340 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 00:04:30] 2026-05-01 22:50:17,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140719411885888)>', '<ExcThread(monitor, started 140718941128448)>']
[2026-05-02 00:04:30] 2026-05-01 22:50:22,394 | INFO     | all workflow threads have been joined
[2026-05-02 00:04:30] 2026-05-01 22:50:22,462 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 00:04:30] 2026-05-01 22:50:22,462 | INFO     | traces error code: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:22,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 00:04:30] 2026-05-01 22:50:41,894 | INFO     | PID=2220939 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 00:04:30] 2026-05-01 22:50:41,895 | INFO     | .. there are 26 such processes running
[2026-05-02 00:04:30] 2026-05-01 22:50:41,896 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 00:04:30] 2026-05-01 22:50:41,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 00:04:30] 2026-05-01 22:50:41,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 00:04:30] 2026-05-01 22:50:41,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 00:04:30] 2026-05-01 22:50:41,897 | CRITICAL | thread 'MainThread' is not alive
[2026-05-02 00:04:30] 2026-05-01 22:50:41,897 | INFO     | [monitor] control thread has ended
[2026-05-02 00:04:30] 2026-05-01 22:50:42,141 [wrapper] ==== pilot stdout END ====
[2026-05-02 00:04:30] 2026-05-01 22:50:42,189 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 00:04:30] 2026-05-01 22:50:42,243 [wrapper] pilotpid: 2220939
[2026-05-02 00:04:30] 2026-05-01 22:50:42,269 [wrapper] Pilot exit status: 0
[2026-05-02 00:04:30] 2026-05-01 22:50:42,405 [wrapper] pandaids: 7123132629
[2026-05-02 00:04:30] 2026-05-01 22:50:42,624 [wrapper] cleanup supervisor_pilot 1265124 2220940
[2026-05-02 00:04:30] 2026-05-01 22:50:42,673 [wrapper] Test setup, not cleaning
[2026-05-02 00:04:30] 2026-05-01 22:50:42,717 [wrapper] apfmon messages muted
[2026-05-02 00:04:30] 2026-05-01 22:50:42,780 [wrapper] ==== wrapper stdout END ====
[2026-05-02 00:04:30] 2026-05-01 22:50:42,848 [wrapper] ==== wrapper stderr END ====
[2026-05-02 00:04:30]  *** Error codes and diagnostics ***
[2026-05-02 00:04:30]     "exeErrorCode": 0,
[2026-05-02 00:04:30]     "pilotErrorCode": 0,
[2026-05-02 00:04:30]  *** Listing of results directory ***
[2026-05-02 00:04:30] total 503368
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 20:21 pilot3.tar.gz
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 20:46 queuedata.json
[2026-05-02 00:04:30] -rwx------. 1 boincer umatlas     36322 Apr 30 20:46 runpilot2-wrapper.sh
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas       100 May  1 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 00:04:30] -rwxr-xr-x. 1 boincer umatlas      7986 May  1 00:05 run_atlas
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas       105 May  1 00:05 job.xml
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas 324465688 May  1 00:05 EVNT.50017118._000032.pool.root.1
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:05 start_atlas.sh
[2026-05-02 00:04:30] drwxrwx--x. 2 boincer umatlas      4096 May  1 00:05 shared
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas    697396 May  1 00:05 input.tar.gz
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas         0 May  1 00:05 boinc_lockfile
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas      2523 May  1 00:05 pandaJob.out
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas        57 May  1 00:05 setup.sh.local
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas   1001814 May  1 00:06 agis_schedconf.cvmfs.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas       441 May  1 00:06 workernode_map.json
[2026-05-02 00:04:30] drwx------. 5 boincer umatlas      4096 May  1 00:06 pilot3
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas 175494137 May  1 18:47 HITS.50017123._000780.pool.root.1
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas       488 May  1 18:48 boinc_task_state.xml
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas      1038 May  1 18:49 memory_monitor_summary.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas   1508687 May  1 18:49 agis_ddmendpoints.agis.ALL.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas    789384 May  1 18:49 log.50017123._000780.job.log.tgz.1
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas      6393 May  1 18:50 heartbeat_new.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas      6284 May  1 18:50 heartbeat.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas        95 May  1 18:50 pilot_heartbeat.json
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas       893 May  1 18:50 pilotlog.txt
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas   4889503 May  1 18:50 log.50017123._000780.job.log.1
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas       357 May  1 18:50 output.list
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas       410 May  1 18:50 runtime_log
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas   5693440 May  1 18:50 result.tar.gz
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas      8960 May  1 18:50 runtime_log.err
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas       657 May  1 18:50 f7d628d11aac.diag
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas        28 May  2 00:04 wrapper_checkpoint.txt
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas      6439 May  2 00:04 init_data.xml
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas      8192 May  2 00:04 boinc_mmap_file
[2026-05-02 00:04:30] -rw-r--r--. 1 boincer umatlas     21385 May  2 00:04 stderr.txt
[2026-05-02 00:04:30] HITS file was successfully produced:
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas 175494137 May  1 18:47 shared/HITS.pool.root.1
[2026-05-02 00:04:30]  *** Contents of shared directory: ***
[2026-05-02 00:04:30] total 494512
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas 324465688 May  1 00:05 ATLAS.root_0
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:05 start_atlas.sh
[2026-05-02 00:04:30] -rw-r--r--. 2 boincer umatlas    697396 May  1 00:05 input.tar.gz
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas 175494137 May  1 18:47 HITS.pool.root.1
[2026-05-02 00:04:30] -rw-------. 1 boincer umatlas   5693440 May  1 18:50 result.tar.gz
00:04:32 (2213879): run_atlas exited; CPU time 97670.435765
00:04:32 (2213879): called boinc_finish(0)

</stderr_txt>
]]>

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