Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:57 (2486739): wrapper (7.7.26015): starting
00:03:57 (2486739): wrapper: running run_atlas (--nthreads 11)
[2026-05-01 00:03:57] Arguments: --nthreads 11
[2026-05-01 00:03:57] Threads: 11
[2026-05-01 00:03:57] Checking for CVMFS
[2026-05-01 00:03:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 00:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 00:03:59] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 00:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 00:04:00] 2.13.3.0 11112 847 140272 159076 1 799 30457481 32935937 16793 16776704 0 3350856 99.348 4765922 27750 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-05-01 00:04:00] CVMFS is ok
[2026-05-01 00:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 00:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 00:04:00] Further information can be found at the LHC@home message board.
[2026-05-01 00:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 00:04:00] Checking for apptainer binary...
[2026-05-01 00:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 00:04:00] Running /usr/bin/apptainer --version
[2026-05-01 00:04:00] apptainer version 1.4.5-3.el9
[2026-05-01 00:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 00:04:01] c6-2-29-1.aglt2.org
[2026-05-01 00:04:01] apptainer works
[2026-05-01 00:04:01] Set ATHENA_PROC_NUMBER=11
[2026-05-01 00:04:01] Set ATHENA_CORE_NUMBER=11
[2026-05-01 00:04:01] Starting ATLAS job with PandaID=7123134025
[2026-05-01 00:04:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 12:03:49]  *** The last 200 lines of the pilot log: ***
[2026-05-01 12:03:49] 2026-05-01 16:02:53,048 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,531 | INFO     | job 7123134025 has state=finished
[2026-05-01 12:03:49] 2026-05-01 16:02:54,531 | INFO     | preparing for final server update for job 7123134025 in state='finished'
[2026-05-01 12:03:49] 2026-05-01 16:02:54,532 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7123134025/jobReport.json
[2026-05-01 12:03:49] 2026-05-01 16:02:54,563 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-05-01 12:03:49] 2026-05-01 16:02:54,564 | INFO     | this job has now completed (state=finished)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,564 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,564 | INFO     | log transfer has been attempted: DONE
[2026-05-01 12:03:49] 2026-05-01 16:02:54,564 | INFO     | job 7123134025 has finished - writing final server update
[2026-05-01 12:03:49] 2026-05-01 16:02:54,565 | INFO     | total number of processed events: 400 (read)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,604 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7123134025/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,605 | INFO     | extracted standard info from prmon json
[2026-05-01 12:03:49] 2026-05-01 16:02:54,605 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 12:03:49] 2026-05-01 16:02:54,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 12:03:49] 2026-05-01 16:02:54,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 12:03:49] 2026-05-01 16:02:54,620 | INFO     | fitting pss+swap vs Time
[2026-05-01 12:03:49] 2026-05-01 16:02:54,622 | INFO     | sum of square deviations: 108646973457.81573
[2026-05-01 12:03:49] 2026-05-01 16:02:54,638 | INFO     | sum of deviations: 829088848130.6101
[2026-05-01 12:03:49] 2026-05-01 16:02:54,639 | INFO     | mean x (centered): 0.0
[2026-05-01 12:03:49] 2026-05-01 16:02:54,639 | INFO     | mean y: 2579671.5460992907
[2026-05-01 12:03:49] 2026-05-01 16:02:54,639 | INFO     | intersect: 2579671.5460992907
[2026-05-01 12:03:49] 2026-05-01 16:02:54,654 | INFO     | chi2: 5.573945540004583
[2026-05-01 12:03:49] 2026-05-01 16:02:54,656 | INFO     | sum of square deviations: 106351728894.10721
[2026-05-01 12:03:49] 2026-05-01 16:02:54,672 | INFO     | sum of deviations: 871929277293.5554
[2026-05-01 12:03:49] 2026-05-01 16:02:54,672 | INFO     | mean x (centered): 0.0
[2026-05-01 12:03:49] 2026-05-01 16:02:54,673 | INFO     | mean y: 2582498.3742857142
[2026-05-01 12:03:49] 2026-05-01 16:02:54,673 | INFO     | intersect: 2582498.3742857142
[2026-05-01 12:03:49] 2026-05-01 16:02:54,674 | INFO     | chi2: 4.765084430949556
[2026-05-01 12:03:49] 2026-05-01 16:02:54,674 | INFO     | current chi2=4.765084430949556 (change=14.511464154964857 %)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,674 | INFO     | right removable region: 699
[2026-05-01 12:03:49] 2026-05-01 16:02:54,675 | INFO     | sum of square deviations: 106351359844.10713
[2026-05-01 12:03:49] 2026-05-01 16:02:54,689 | INFO     | sum of deviations: 600051783575.0643
[2026-05-01 12:03:49] 2026-05-01 16:02:54,689 | INFO     | mean x (centered): 0.0
[2026-05-01 12:03:49] 2026-05-01 16:02:54,689 | INFO     | mean y: 2594876.4585714284
[2026-05-01 12:03:49] 2026-05-01 16:02:54,689 | INFO     | intersect: 2594876.4585714284
[2026-05-01 12:03:49] 2026-05-01 16:02:54,691 | INFO     | chi2: 2.03090388639972
[2026-05-01 12:03:49] 2026-05-01 16:02:54,691 | INFO     | current chi2=2.03090388639972 (change=63.56433926697371 %)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,692 | INFO     | sum of square deviations: 104088304980.34515
[2026-05-01 12:03:49] 2026-05-01 16:02:54,734 | INFO     | sum of deviations: 517121065260.6837
[2026-05-01 12:03:49] 2026-05-01 16:02:54,735 | INFO     | mean x (centered): 0.0
[2026-05-01 12:03:49] 2026-05-01 16:02:54,735 | INFO     | mean y: 2600460.818705036
[2026-05-01 12:03:49] 2026-05-01 16:02:54,735 | INFO     | intersect: 2600460.818705036
[2026-05-01 12:03:49] 2026-05-01 16:02:54,736 | INFO     | chi2: 1.6473730546244476
[2026-05-01 12:03:49] 2026-05-01 16:02:54,737 | INFO     | current chi2=1.6473730546244476 (change=18.884735724996613 %)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,737 | INFO     | left removable region: 10
[2026-05-01 12:03:49] 2026-05-01 16:02:54,761 | INFO     | sum of square deviations: 101415732105.75943
[2026-05-01 12:03:49] 2026-05-01 16:02:54,802 | INFO     | sum of deviations: 560252420066.5128
[2026-05-01 12:03:49] 2026-05-01 16:02:54,802 | INFO     | mean x (centered): 0.0
[2026-05-01 12:03:49] 2026-05-01 16:02:54,802 | INFO     | mean y: 2603388.994194485
[2026-05-01 12:03:49] 2026-05-01 16:02:54,802 | INFO     | intersect: 2603388.994194485
[2026-05-01 12:03:49] 2026-05-01 16:02:54,803 | INFO     | chi2: 0.8257209159957991
[2026-05-01 12:03:49] 2026-05-01 16:02:54,804 | INFO     | current memory leak: 5.52 B/s (using 689 data points, chi2=0.83)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,805 | INFO     | could have reported an average CPU frequency of 2947 MHz (27 samples)
[2026-05-01 12:03:49] 2026-05-01 16:02:54,805 | INFO     | ..............................
[2026-05-01 12:03:49] 2026-05-01 16:02:54,805 | INFO     | . Timing measurements:
[2026-05-01 12:03:49] 2026-05-01 16:02:54,816 | INFO     | . get job = 0 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,816 | INFO     | . initial setup = 28 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,816 | INFO     | . payload setup = 46 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,816 | INFO     | . stage-in = 0 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,816 | INFO     | . payload execution = 42983 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,817 | INFO     | . stage-out = 2 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,817 | INFO     | . log creation = 0 s
[2026-05-01 12:03:49] 2026-05-01 16:02:54,817 | INFO     | ..............................
[2026-05-01 12:03:49] 2026-05-01 16:02:55,336 | INFO     | 
[2026-05-01 12:03:49] 2026-05-01 16:02:55,336 | INFO     | job summary report
[2026-05-01 12:03:49] 2026-05-01 16:02:55,336 | INFO     | --------------------------------------------------
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | PanDA job id: 7123134025
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | task id: 50017337
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | errors: (none)
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | pilot state: finished 
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | transexitcode: 0
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | exeerrorcode: 0
[2026-05-01 12:03:49] 2026-05-01 16:02:55,337 | INFO     | exeerrordiag: 
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | exitcode: 0
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | exitmsg: OK
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | cpuconsumptiontime: 83357 s
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | nevents: 400
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | neventsw: 0
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | pid: 2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | pgrp: 2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | corecount: 11
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | event service: False
[2026-05-01 12:03:49] 2026-05-01 16:02:55,338 | INFO     | sizes: {0: 2276453, 1: 2276537, 2: 2278338, 13: 2278366, 43034: 2322753, 43037: 2332209, 43041: 2332347}
[2026-05-01 12:03:49] 2026-05-01 16:02:55,339 | INFO     | --------------------------------------------------
[2026-05-01 12:03:49] 2026-05-01 16:02:55,339 | INFO     | 
[2026-05-01 12:03:49] 2026-05-01 16:02:55,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-01 12:03:49] 2026-05-01 16:02:55,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | job 7123134025 has completed (purged errors)
[2026-05-01 12:03:49] 2026-05-01 16:02:55,440 | INFO     | overall cleanup function is called
[2026-05-01 12:03:49] 2026-05-01 16:02:55,758 | INFO     | PID=2496683 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 12:03:49] 2026-05-01 16:02:55,758 | INFO     | .. there are 16 such processes running
[2026-05-01 12:03:49] 2026-05-01 16:02:56,471 | INFO     | --- collectZombieJob: --- 10, [2514304]
[2026-05-01 12:03:49] 2026-05-01 16:02:56,471 | INFO     | zombie collector waiting for pid 2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:56,471 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 12:03:49] 2026-05-01 16:02:56,472 | INFO     | collected zombie processes
[2026-05-01 12:03:49] 2026-05-01 16:02:56,472 | INFO     | will attempt to kill all subprocesses of pid=2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:56,802 | INFO     | process IDs to be killed: [2514304] (in reverse order)
[2026-05-01 12:03:49] 2026-05-01 16:02:56,944 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 12:03:49] 2026-05-01 16:02:56,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 12:03:49] 2026-05-01 16:02:56,956 | INFO     | did not find any defunct processes belonging to 2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:56,967 | INFO     | did not find any defunct processes belonging to 2514304
[2026-05-01 12:03:49] 2026-05-01 16:02:56,968 | INFO     | Ready for new job
[2026-05-01 12:03:49] 2026-05-01 16:02:56,971 | INFO     | ***************************************
[2026-05-01 12:03:49] 2026-05-01 16:02:56,971 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 12:03:49] 2026-05-01 16:02:56,971 | INFO     | ***************************************
[2026-05-01 12:03:49] 2026-05-01 16:02:56,971 | INFO     | 
[2026-05-01 12:03:49] 2026-05-01 16:02:56,981 | INFO     | architecture information:
[2026-05-01 12:03:49] 2026-05-01 16:02:56,989 | INFO     | executing command: cat /etc/os-release
[2026-05-01 12:03:49] 2026-05-01 16:02:57,009 | INFO     | cat /etc/os-release:
[2026-05-01 12:03:49] NAME="CentOS Linux"
[2026-05-01 12:03:49] VERSION="7 (Core)"
[2026-05-01 12:03:49] ID="centos"
[2026-05-01 12:03:49] ID_LIKE="rhel fedora"
[2026-05-01 12:03:49] VERSION_ID="7"
[2026-05-01 12:03:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 12:03:49] ANSI_COLOR="0;31"
[2026-05-01 12:03:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 12:03:49] HOME_URL="https://www.centos.org/"
[2026-05-01 12:03:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 12:03:49] 
[2026-05-01 12:03:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 12:03:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 12:03:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 12:03:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 12:03:49] 
[2026-05-01 12:03:49] 2026-05-01 16:02:57,010 | INFO     | ***************************************
[2026-05-01 12:03:49] 2026-05-01 16:02:57,514 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-01 12:03:49] 2026-05-01 16:02:57,591 | INFO     | sufficient remaining disk space (75054972928 B)
[2026-05-01 12:03:49] 2026-05-01 16:02:57,592 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 12:03:49] 2026-05-01 16:02:57,592 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 12:03:49] 2026-05-01 16:02:57,592 | INFO     | update_server=False
[2026-05-01 12:03:49] 2026-05-01 16:02:57,592 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 12:03:49] 2026-05-01 16:02:57,593 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 12:03:49] 2026-05-01 16:02:57,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 12:03:49] 2026-05-01 16:02:57,599 | INFO     | aborting loop
[2026-05-01 12:03:49] 2026-05-01 16:02:57,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 12:03:49] 2026-05-01 16:02:58,139 | INFO     | all data control threads have been joined
[2026-05-01 12:03:49] 2026-05-01 16:02:58,554 | INFO     | all payload control threads have been joined
[2026-05-01 12:03:49] 2026-05-01 16:02:58,598 | INFO     | [job] retrieve thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,605 | INFO     | [job] job monitor thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,727 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,803 | INFO     | [data] copytool_in thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,808 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,929 | INFO     | [payload] failed_post thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:58,972 | INFO     | all job control threads have been joined
[2026-05-01 12:03:49] 2026-05-01 16:02:59,152 | INFO     | [data] control thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:59,321 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:59,452 | INFO     | [payload] validate_post thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:59,560 | INFO     | [payload] control thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:59,600 | INFO     | [data] copytool_out thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:02:59,979 | INFO     | [job] control thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:03:00,071 | INFO     | [job] validate thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:03:00,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 12:03:49] 2026-05-01 16:03:01,368 | INFO     | [job] queue monitor thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:03:01,696 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:03:07,841 | INFO     | job.realtimelogging is not enabled
[2026-05-01 12:03:49] 2026-05-01 16:03:08,847 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 12:03:49] 2026-05-01 16:03:28,187 | INFO     | PID=2496683 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 12:03:49] 2026-05-01 16:03:28,187 | INFO     | .. there are 16 such processes running
[2026-05-01 12:03:49] 2026-05-01 16:03:28,187 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 12:03:49] 2026-05-01 16:03:28,187 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 12:03:49] 2026-05-01 16:03:28,188 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 12:03:49] 2026-05-01 16:03:42,798 | INFO     | [monitor] cgroup control has ended
[2026-05-01 12:03:49] 2026-05-01 16:03:43,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720185972544)>', '<ExcThread(monitor, started 139719841146624)>']
[2026-05-01 12:03:49] 2026-05-01 16:03:44,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 12:03:49] 2026-05-01 16:03:44,281 | INFO     | [monitor] control thread has ended
[2026-05-01 12:03:49] 2026-05-01 16:03:48,790 | INFO     | all workflow threads have been joined
[2026-05-01 12:03:49] 2026-05-01 16:03:48,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 12:03:49] 2026-05-01 16:03:48,791 | INFO     | traces error code: 0
[2026-05-01 12:03:49] 2026-05-01 16:03:48,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 12:03:49] 2026-05-01 16:03:48,999 [wrapper] ==== pilot stdout END ====
[2026-05-01 12:03:49] 2026-05-01 16:03:49,025 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 12:03:49] 2026-05-01 16:03:49,057 [wrapper] pilotpid: 2496683
[2026-05-01 12:03:49] 2026-05-01 16:03:49,060 [wrapper] Pilot exit status: 0
[2026-05-01 12:03:49] 2026-05-01 16:03:49,080 [wrapper] pandaids: 7123134025
[2026-05-01 12:03:49] 2026-05-01 16:03:49,146 [wrapper] cleanup supervisor_pilot  236698 2496684
[2026-05-01 12:03:49] 2026-05-01 16:03:49,149 [wrapper] Test setup, not cleaning
[2026-05-01 12:03:49] 2026-05-01 16:03:49,152 [wrapper] apfmon messages muted
[2026-05-01 12:03:49] 2026-05-01 16:03:49,155 [wrapper] ==== wrapper stdout END ====
[2026-05-01 12:03:49] 2026-05-01 16:03:49,159 [wrapper] ==== wrapper stderr END ====
[2026-05-01 12:03:49]  *** Error codes and diagnostics ***
[2026-05-01 12:03:49]     "exeErrorCode": 0,
[2026-05-01 12:03:49]     "pilotErrorCode": 0,
[2026-05-01 12:03:49]  *** Listing of results directory ***
[2026-05-01 12:03:49] total 457144
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 20:21 pilot3.tar.gz
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 20:43 queuedata.json
[2026-05-01 12:03:49] -rwx------. 1 boincer umatlas     36322 Apr 30 20:43 runpilot2-wrapper.sh
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas       100 May  1 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 12:03:49] -rwxr-xr-x. 1 boincer umatlas      7986 May  1 00:03 run_atlas
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas       105 May  1 00:03 job.xml
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas 285208665 May  1 00:03 EVNT.50017333._000010.pool.root.1
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:03 start_atlas.sh
[2026-05-01 12:03:49] drwxrwx--x. 2 boincer umatlas      4096 May  1 00:03 shared
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas    697398 May  1 00:03 input.tar.gz
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas         0 May  1 00:03 boinc_lockfile
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas      2526 May  1 00:04 pandaJob.out
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas        57 May  1 00:04 setup.sh.local
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas   1001814 May  1 00:04 agis_schedconf.cvmfs.json
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas       442 May  1 00:05 workernode_map.json
[2026-05-01 12:03:49] drwx------. 5 boincer umatlas      4096 May  1 00:05 pilot3
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas      6756 May  1 11:58 init_data.xml
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas 170508043 May  1 12:02 HITS.50017337._000229.pool.root.1
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas       489 May  1 12:02 boinc_task_state.xml
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas        95 May  1 12:02 pilot_heartbeat.json
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas      1054 May  1 12:02 memory_monitor_summary.json
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas   1508687 May  1 12:02 agis_ddmendpoints.agis.ALL.json
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas    677490 May  1 12:02 log.50017337._000229.job.log.tgz.1
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas      6428 May  1 12:02 heartbeat_new.json
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas      6319 May  1 12:02 heartbeat.json
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas      8192 May  1 12:03 boinc_mmap_file
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas        28 May  1 12:03 wrapper_checkpoint.txt
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas      4895 May  1 12:03 pilotlog.txt
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas   3447787 May  1 12:03 log.50017337._000229.job.log.1
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas       357 May  1 12:03 output.list
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas       410 May  1 12:03 runtime_log
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas   4147200 May  1 12:03 result.tar.gz
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas      8972 May  1 12:03 runtime_log.err
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas       663 May  1 12:03 f73c7a44f89f.diag
[2026-05-01 12:03:49] -rw-r--r--. 1 boincer umatlas     21306 May  1 12:03 stderr.txt
[2026-05-01 12:03:49] HITS file was successfully produced:
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas 170508043 May  1 12:02 shared/HITS.pool.root.1
[2026-05-01 12:03:49]  *** Contents of shared directory: ***
[2026-05-01 12:03:49] total 449800
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas 285208665 May  1 00:03 ATLAS.root_0
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:03 start_atlas.sh
[2026-05-01 12:03:49] -rw-r--r--. 2 boincer umatlas    697398 May  1 00:03 input.tar.gz
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas 170508043 May  1 12:02 HITS.pool.root.1
[2026-05-01 12:03:49] -rw-------. 1 boincer umatlas   4147200 May  1 12:03 result.tar.gz
12:03:51 (2486739): run_atlas exited; CPU time 84655.850266
12:03:51 (2486739): called boinc_finish(0)

</stderr_txt>
]]>

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