Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:06:15 (13727): wrapper (7.7.26015): starting
15:06:15 (13727): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 15:06:15] Arguments: --nthreads 8
[2026-05-01 15:06:15] Threads: 8
[2026-05-01 15:06:15] Checking for CVMFS
[2026-05-01 15:06:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 15:06:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 15:06:21] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 15:06:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 15:06:23] 2.11.2.0 3305 22802 98592 159095 2 53 25082936 25165825 96 130560 0 6995599 99.954 1835784 2519 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 15:06:23] CVMFS is ok
[2026-05-01 15:06:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 15:06:23] Checking for apptainer binary...
[2026-05-01 15:06:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 15:06:23] Running /usr/bin/apptainer --version
[2026-05-01 15:06:23] apptainer version 1.3.2-1.el7
[2026-05-01 15:06:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 15:06:50] cg-vwn370.simple-grid.lan
[2026-05-01 15:06:50] apptainer works
[2026-05-01 15:06:50] Set ATHENA_PROC_NUMBER=8
[2026-05-01 15:06:50] Set ATHENA_CORE_NUMBER=8
[2026-05-01 15:06:51] Starting ATLAS job with PandaID=7123132630
[2026-05-01 15:06:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 19:53:44]  *** The last 200 lines of the pilot log: ***
[2026-05-01 19:53:44] 2026-05-01 17:52:59,101 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,101 | INFO     | log transfer has been attempted: DONE
[2026-05-01 19:53:44] 2026-05-01 17:52:59,101 | INFO     | job 7123132630 has finished - writing final server update
[2026-05-01 19:53:44] 2026-05-01 17:52:59,102 | INFO     | total number of processed events: 400 (read)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,104 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7123132630/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,104 | INFO     | extracted standard info from prmon json
[2026-05-01 19:53:44] 2026-05-01 17:52:59,105 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 19:53:44] 2026-05-01 17:52:59,105 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 19:53:44] 2026-05-01 17:52:59,105 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 19:53:44] 2026-05-01 17:52:59,111 | INFO     | fitting pss+swap vs Time
[2026-05-01 19:53:44] 2026-05-01 17:52:59,111 | INFO     | sum of square deviations: 6035722470.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,114 | INFO     | sum of deviations: 95371910706.00003
[2026-05-01 19:53:44] 2026-05-01 17:52:59,114 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,114 | INFO     | mean y: 2474987.6059479555
[2026-05-01 19:53:44] 2026-05-01 17:52:59,115 | INFO     | intersect: 2474987.6059479555
[2026-05-01 19:53:44] 2026-05-01 17:52:59,115 | INFO     | chi2: 8.399872727695172
[2026-05-01 19:53:44] 2026-05-01 17:52:59,116 | INFO     | sum of square deviations: 5705372090.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,126 | INFO     | sum of deviations: 111667035875.49997
[2026-05-01 19:53:44] 2026-05-01 17:52:59,127 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,127 | INFO     | mean y: 2482384.2386363638
[2026-05-01 19:53:44] 2026-05-01 17:52:59,127 | INFO     | intersect: 2482384.2386363638
[2026-05-01 19:53:44] 2026-05-01 17:52:59,127 | INFO     | chi2: 7.697441108697574
[2026-05-01 19:53:44] 2026-05-01 17:52:59,128 | INFO     | current chi2=7.697441108697574 (change=8.362407881271993 %)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,128 | INFO     | right removable region: 263
[2026-05-01 19:53:44] 2026-05-01 17:52:59,128 | INFO     | sum of square deviations: 5705372090.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,131 | INFO     | sum of deviations: -1856393327.5000057
[2026-05-01 19:53:44] 2026-05-01 17:52:59,131 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,131 | INFO     | mean y: 2519851.503787879
[2026-05-01 19:53:44] 2026-05-01 17:52:59,131 | INFO     | intersect: 2519851.503787879
[2026-05-01 19:53:44] 2026-05-01 17:52:59,132 | INFO     | chi2: 3.2029550783617258
[2026-05-01 19:53:44] 2026-05-01 17:52:59,132 | INFO     | current chi2=3.2029550783617258 (change=61.86900466001967 %)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,132 | INFO     | sum of square deviations: 5387301010.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,135 | INFO     | sum of deviations: -62587614792.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,135 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,135 | INFO     | mean y: 2548877.277992278
[2026-05-01 19:53:44] 2026-05-01 17:52:59,135 | INFO     | intersect: 2548877.277992278
[2026-05-01 19:53:44] 2026-05-01 17:52:59,136 | INFO     | chi2: 1.0881397610138595
[2026-05-01 19:53:44] 2026-05-01 17:52:59,136 | INFO     | current chi2=1.0881397610138595 (change=66.02700523759982 %)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,136 | INFO     | sum of square deviations: 5081276667.5
[2026-05-01 19:53:44] 2026-05-01 17:52:59,139 | INFO     | sum of deviations: -69293537308.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,139 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,139 | INFO     | mean y: 2552175.6456692913
[2026-05-01 19:53:44] 2026-05-01 17:52:59,139 | INFO     | intersect: 2552175.6456692913
[2026-05-01 19:53:44] 2026-05-01 17:52:59,140 | INFO     | chi2: 1.0096545681855826
[2026-05-01 19:53:44] 2026-05-01 17:52:59,140 | INFO     | current chi2=1.0096545681855826 (change=7.212786044611522 %)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,140 | INFO     | left removable region: 15
[2026-05-01 19:53:44] 2026-05-01 17:52:59,140 | INFO     | sum of square deviations: 4729621702.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,143 | INFO     | sum of deviations: -50691904569.00001
[2026-05-01 19:53:44] 2026-05-01 17:52:59,143 | INFO     | mean x (centered): 0.0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,143 | INFO     | mean y: 2561679.314516129
[2026-05-01 19:53:44] 2026-05-01 17:52:59,143 | INFO     | intersect: 2561679.314516129
[2026-05-01 19:53:44] 2026-05-01 17:52:59,144 | INFO     | chi2: 0.2157780266653934
[2026-05-01 19:53:44] 2026-05-01 17:52:59,144 | INFO     | current memory leak: -10.72 B/s (using 248 data points, chi2=0.22)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,144 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | ..............................
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . Timing measurements:
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . get job = 0 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . initial setup = 119 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . payload setup = 227 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . stage-in = 0 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . payload execution = 16542 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,145 | INFO     | . stage-out = 3 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,146 | INFO     | . log creation = 1 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,146 | INFO     | ..............................
[2026-05-01 19:53:44] 2026-05-01 17:52:59,280 | INFO     | 
[2026-05-01 19:53:44] 2026-05-01 17:52:59,280 | INFO     | job summary report
[2026-05-01 19:53:44] 2026-05-01 17:52:59,280 | INFO     | --------------------------------------------------
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | PanDA job id: 7123132630
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | task id: 50017123
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | errors: (none)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | pilot state: finished 
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | transexitcode: 0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | exeerrorcode: 0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | exeerrordiag: 
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | exitcode: 0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | exitmsg: OK
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | cpuconsumptiontime: 69342 s
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | nevents: 400
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | neventsw: 0
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | pid: 22173
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | pgrp: 22173
[2026-05-01 19:53:44] 2026-05-01 17:52:59,281 | INFO     | corecount: 8
[2026-05-01 19:53:44] 2026-05-01 17:52:59,282 | INFO     | event service: False
[2026-05-01 19:53:44] 2026-05-01 17:52:59,282 | INFO     | sizes: {0: 2274625, 1: 2275310, 2: 2275711, 3: 2277139, 13: 2277167, 16774: 2309162, 16778: 2318160, 16779: 2318216, 16782: 2318410}
[2026-05-01 19:53:44] 2026-05-01 17:52:59,282 | INFO     | --------------------------------------------------
[2026-05-01 19:53:44] 2026-05-01 17:52:59,282 | INFO     | 
[2026-05-01 19:53:44] 2026-05-01 17:52:59,282 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-01 19:53:44] 2026-05-01 17:52:59,687 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,687 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,687 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,687 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,688 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | job 7123132630 has completed (purged errors)
[2026-05-01 19:53:44] 2026-05-01 17:52:59,689 | INFO     | overall cleanup function is called
[2026-05-01 19:53:44] 2026-05-01 17:53:00,698 | INFO     | --- collectZombieJob: --- 10, [22173]
[2026-05-01 19:53:44] 2026-05-01 17:53:00,699 | INFO     | zombie collector waiting for pid 22173
[2026-05-01 19:53:44] 2026-05-01 17:53:00,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 19:53:44] 2026-05-01 17:53:00,699 | INFO     | collected zombie processes
[2026-05-01 19:53:44] 2026-05-01 17:53:00,699 | INFO     | will attempt to kill all subprocesses of pid=22173
[2026-05-01 19:53:44] 2026-05-01 17:53:00,758 | INFO     | process IDs to be killed: [22173] (in reverse order)
[2026-05-01 19:53:44] 2026-05-01 17:53:01,711 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 19:53:44] 2026-05-01 17:53:01,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 19:53:44] 2026-05-01 17:53:01,713 | INFO     | did not find any defunct processes belonging to 22173
[2026-05-01 19:53:44] 2026-05-01 17:53:01,715 | INFO     | did not find any defunct processes belonging to 22173
[2026-05-01 19:53:44] 2026-05-01 17:53:01,715 | INFO     | Ready for new job
[2026-05-01 19:53:44] 2026-05-01 17:53:01,717 | INFO     | ***************************************
[2026-05-01 19:53:44] 2026-05-01 17:53:01,717 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 19:53:44] 2026-05-01 17:53:01,717 | INFO     | ***************************************
[2026-05-01 19:53:44] 2026-05-01 17:53:01,718 | INFO     | 
[2026-05-01 19:53:44] 2026-05-01 17:53:01,718 | INFO     | pilot is running in a VM
[2026-05-01 19:53:44] 2026-05-01 17:53:01,718 | INFO     | architecture information:
[2026-05-01 19:53:44] 2026-05-01 17:53:01,726 | INFO     | executing command: cat /etc/os-release
[2026-05-01 19:53:44] 2026-05-01 17:53:02,032 | INFO     | cat /etc/os-release:
[2026-05-01 19:53:44] NAME="CentOS Linux"
[2026-05-01 19:53:44] VERSION="7 (Core)"
[2026-05-01 19:53:44] ID="centos"
[2026-05-01 19:53:44] ID_LIKE="rhel fedora"
[2026-05-01 19:53:44] VERSION_ID="7"
[2026-05-01 19:53:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 19:53:44] ANSI_COLOR="0;31"
[2026-05-01 19:53:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 19:53:44] HOME_URL="https://www.centos.org/"
[2026-05-01 19:53:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 19:53:44] 
[2026-05-01 19:53:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 19:53:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 19:53:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 19:53:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 19:53:44] 
[2026-05-01 19:53:44] 2026-05-01 17:53:02,032 | INFO     | ***************************************
[2026-05-01 19:53:44] 2026-05-01 17:53:02,536 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-01 19:53:44] 2026-05-01 17:53:02,714 | INFO     | sufficient remaining disk space (496456695808 B)
[2026-05-01 19:53:44] 2026-05-01 17:53:02,714 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 19:53:44] 2026-05-01 17:53:02,714 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 19:53:44] 2026-05-01 17:53:02,715 | INFO     | update_server=False
[2026-05-01 19:53:44] 2026-05-01 17:53:02,715 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 19:53:44] 2026-05-01 17:53:02,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 19:53:44] 2026-05-01 17:53:02,716 | INFO     | aborting loop
[2026-05-01 19:53:44] 2026-05-01 17:53:02,717 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 19:53:44] 2026-05-01 17:53:03,280 | INFO     | all data control threads have been joined
[2026-05-01 19:53:44] 2026-05-01 17:53:03,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 19:53:44] 2026-05-01 17:53:03,720 | INFO     | [job] retrieve thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:03,721 | INFO     | [job] job monitor thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:03,755 | INFO     | all payload control threads have been joined
[2026-05-01 19:53:44] 2026-05-01 17:53:04,286 | INFO     | [data] control thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:04,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 19:53:44] 2026-05-01 17:53:04,309 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:04,336 | INFO     | all job control threads have been joined
[2026-05-01 19:53:44] 2026-05-01 17:53:04,494 | INFO     | [data] copytool_in thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:04,761 | INFO     | [payload] control thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:04,802 | INFO     | [payload] failed_post thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,036 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,041 | INFO     | [job] validate thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,124 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,221 | INFO     | [payload] validate_post thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,303 | INFO     | [job] queue monitor thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,342 | INFO     | [job] control thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:05,344 | INFO     | [data] copytool_out thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:06,726 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:13,364 | INFO     | job.realtimelogging is not enabled
[2026-05-01 19:53:44] 2026-05-01 17:53:14,371 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 19:53:44] 2026-05-01 17:53:32,366 | INFO     | [monitor] cgroup control has ended
[2026-05-01 19:53:44] 2026-05-01 17:53:32,660 | INFO     | PID=17719 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 19:53:44] 2026-05-01 17:53:32,660 | INFO     | .. there are 2 such processes running
[2026-05-01 19:53:44] 2026-05-01 17:53:32,660 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 19:53:44] 2026-05-01 17:53:32,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 19:53:44] 2026-05-01 17:53:32,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 19:53:44] 2026-05-01 17:53:32,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489789912896)>', '<ExcThread(monitor, started 140489353312000)>']
[2026-05-01 19:53:44] 2026-05-01 17:53:33,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 19:53:44] 2026-05-01 17:53:33,667 | INFO     | [monitor] control thread has ended
[2026-05-01 19:53:44] 2026-05-01 17:53:37,980 | INFO     | all workflow threads have been joined
[2026-05-01 19:53:44] 2026-05-01 17:53:37,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 19:53:44] 2026-05-01 17:53:37,981 | INFO     | traces error code: 0
[2026-05-01 19:53:44] 2026-05-01 17:53:37,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 19:53:44] 2026-05-01 17:53:38,435 [wrapper] ==== pilot stdout END ====
[2026-05-01 19:53:44] 2026-05-01 17:53:38,516 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 19:53:44] 2026-05-01 17:53:38,573 [wrapper] pilotpid: 17719
[2026-05-01 19:53:44] 2026-05-01 17:53:38,709 [wrapper] Pilot exit status: 0
[2026-05-01 19:53:44] 2026-05-01 17:53:39,230 [wrapper] pandaids: 7123132630
[2026-05-01 19:53:44] 2026-05-01 17:53:40,312 [wrapper] cleanup supervisor_pilot  8515 17720
[2026-05-01 19:53:44] 2026-05-01 17:53:40,441 [wrapper] Test setup, not cleaning
[2026-05-01 19:53:44] 2026-05-01 17:53:40,574 [wrapper] apfmon messages muted
[2026-05-01 19:53:44] 2026-05-01 17:53:40,635 [wrapper] ==== wrapper stdout END ====
[2026-05-01 19:53:44] 2026-05-01 17:53:40,681 [wrapper] ==== wrapper stderr END ====
[2026-05-01 19:53:44]  *** Error codes and diagnostics ***
[2026-05-01 19:53:44]     "exeErrorCode": 0,
[2026-05-01 19:53:44]     "pilotErrorCode": 0,
[2026-05-01 19:53:44]  *** Listing of results directory ***
[2026-05-01 19:53:44] total 498464
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc    683926 May  1 02:21 pilot3.tar.gz
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc      5631 May  1 02:43 queuedata.json
[2026-05-01 19:53:44] -rwx------. 1 boinc boinc     36322 May  1 02:43 runpilot2-wrapper.sh
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc       100 May  1 15:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 19:53:44] -rwxr-xr-x. 1 boinc boinc      7986 May  1 15:06 run_atlas
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc       105 May  1 15:06 job.xml
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc 324465688 May  1 15:06 EVNT.50017118._000032.pool.root.1
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc    697397 May  1 15:06 input.tar.gz
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc      6307 May  1 15:06 init_data.xml
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc     15667 May  1 15:06 start_atlas.sh
[2026-05-01 19:53:44] drwxrwx--x. 2 boinc boinc        68 May  1 15:06 shared
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc         0 May  1 15:06 boinc_lockfile
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc      2523 May  1 15:06 pandaJob.out
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc       415 May  1 15:12 workernode_map.json
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc   1003083 May  1 15:13 agis_schedconf.cvmfs.json
[2026-05-01 19:53:44] drwx------. 5 boinc boinc      4096 May  1 15:13 pilot3
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc 177915565 May  1 19:51 HITS.50017123._000781.pool.root.1
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc       489 May  1 19:51 boinc_task_state.xml
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc        95 May  1 19:52 pilot_heartbeat.json
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc      1035 May  1 19:52 memory_monitor_summary.json
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc   1508687 May  1 19:52 agis_ddmendpoints.agis.ALL.json
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc    409540 May  1 19:52 log.50017123._000781.job.log.tgz.1
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc      6341 May  1 19:52 heartbeat_new.json
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc      6232 May  1 19:52 heartbeat.json
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc        28 May  1 19:53 wrapper_checkpoint.txt
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc      8192 May  1 19:53 boinc_mmap_file
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc      4955 May  1 19:53 pilotlog.txt
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc   1553505 May  1 19:53 log.50017123._000781.job.log.1
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc       357 May  1 19:53 output.list
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc       410 May  1 19:53 runtime_log
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc   1976320 May  1 19:53 result.tar.gz
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc      8439 May  1 19:53 runtime_log.err
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc       656 May  1 19:53 f722db755320.diag
[2026-05-01 19:53:44] -rw-r--r--. 1 boinc boinc     20642 May  1 19:53 stderr.txt
[2026-05-01 19:53:44] HITS file was successfully produced:
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc 177915565 May  1 19:51 shared/HITS.pool.root.1
[2026-05-01 19:53:44]  *** Contents of shared directory: ***
[2026-05-01 19:53:44] total 493244
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc 324465688 May  1 15:06 ATLAS.root_0
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc    697397 May  1 15:06 input.tar.gz
[2026-05-01 19:53:44] -rw-r--r--. 2 boinc boinc     15667 May  1 15:06 start_atlas.sh
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc 177915565 May  1 19:51 HITS.pool.root.1
[2026-05-01 19:53:44] -rw-------. 1 boinc boinc   1976320 May  1 19:53 result.tar.gz
19:53:45 (13727): run_atlas exited; CPU time 69503.719990
19:53:45 (13727): called boinc_finish(0)

</stderr_txt>
]]>

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