Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:08:28 (29825): wrapper (7.7.26015): starting
13:08:28 (29825): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 13:08:28] Arguments: --nthreads 8
[2026-05-01 13:08:28] Threads: 8
[2026-05-01 13:08:28] Checking for CVMFS
[2026-05-01 13:08:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 13:08:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 13:08:30] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 13:08:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 13:08:31] 2.11.2.0 21848 22690 100260 159092 1 93 18204073 25165825 1088 130560 0 6742058 99.839 7059016 5321 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 13:08:31] CVMFS is ok
[2026-05-01 13:08:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:08:31] Checking for apptainer binary...
[2026-05-01 13:08:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 13:08:31] Running /usr/bin/apptainer --version
[2026-05-01 13:08:31] apptainer version 1.3.2-1.el7
[2026-05-01 13:08:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:08:45] cg-vwn454.simple-grid.lan
[2026-05-01 13:08:45] apptainer works
[2026-05-01 13:08:45] Set ATHENA_PROC_NUMBER=8
[2026-05-01 13:08:45] Set ATHENA_CORE_NUMBER=8
[2026-05-01 13:08:45] Starting ATLAS job with PandaID=7123120100
[2026-05-01 13:08:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 20:27:25]  *** The last 200 lines of the pilot log: ***
[2026-05-01 20:27:25] 2026-05-01 18:26:26,301 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,301 | INFO     | log transfer has been attempted: DONE
[2026-05-01 20:27:25] 2026-05-01 18:26:26,301 | INFO     | job 7123120100 has finished - writing final server update
[2026-05-01 20:27:25] 2026-05-01 18:26:26,302 | INFO     | total number of processed events: 400 (read)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,304 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7123120100/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,304 | INFO     | extracted standard info from prmon json
[2026-05-01 20:27:25] 2026-05-01 18:26:26,305 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 20:27:25] 2026-05-01 18:26:26,305 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 20:27:25] 2026-05-01 18:26:26,305 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 20:27:25] 2026-05-01 18:26:26,313 | INFO     | fitting pss+swap vs Time
[2026-05-01 20:27:25] 2026-05-01 18:26:26,314 | INFO     | sum of square deviations: 22650685012.978554
[2026-05-01 20:27:25] 2026-05-01 18:26:26,319 | INFO     | sum of deviations: 118867411439.90671
[2026-05-01 20:27:25] 2026-05-01 18:26:26,319 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,319 | INFO     | mean y: 2481306.9688995215
[2026-05-01 20:27:25] 2026-05-01 18:26:26,320 | INFO     | intersect: 2481306.9688995215
[2026-05-01 20:27:25] 2026-05-01 18:26:26,320 | INFO     | chi2: 7.928966090298556
[2026-05-01 20:27:25] 2026-05-01 18:26:26,321 | INFO     | sum of square deviations: 21847619249.1767
[2026-05-01 20:27:25] 2026-05-01 18:26:26,326 | INFO     | sum of deviations: 145428163784.82822
[2026-05-01 20:27:25] 2026-05-01 18:26:26,326 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,326 | INFO     | mean y: 2486299.7869249396
[2026-05-01 20:27:25] 2026-05-01 18:26:26,326 | INFO     | intersect: 2486299.7869249396
[2026-05-01 20:27:25] 2026-05-01 18:26:26,327 | INFO     | chi2: 7.196357650210522
[2026-05-01 20:27:25] 2026-05-01 18:26:26,327 | INFO     | current chi2=7.196357650210522 (change=9.239646528245512 %)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,327 | INFO     | right removable region: 412
[2026-05-01 20:27:25] 2026-05-01 18:26:26,328 | INFO     | sum of square deviations: 21847493579.200966
[2026-05-01 20:27:25] 2026-05-01 18:26:26,333 | INFO     | sum of deviations: -28706634837.41401
[2026-05-01 20:27:25] 2026-05-01 18:26:26,333 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,333 | INFO     | mean y: 2509317.092009685
[2026-05-01 20:27:25] 2026-05-01 18:26:26,334 | INFO     | intersect: 2509317.092009685
[2026-05-01 20:27:25] 2026-05-01 18:26:26,334 | INFO     | chi2: 3.180819408339275
[2026-05-01 20:27:25] 2026-05-01 18:26:26,335 | INFO     | current chi2=3.180819408339275 (change=59.88355389448381 %)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,335 | INFO     | sum of square deviations: 21063511807.647182
[2026-05-01 20:27:25] 2026-05-01 18:26:26,341 | INFO     | sum of deviations: -122859487781.64706
[2026-05-01 20:27:25] 2026-05-01 18:26:26,341 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,341 | INFO     | mean y: 2527595.637254902
[2026-05-01 20:27:25] 2026-05-01 18:26:26,341 | INFO     | intersect: 2527595.637254902
[2026-05-01 20:27:25] 2026-05-01 18:26:26,342 | INFO     | chi2: 1.1105043707082243
[2026-05-01 20:27:25] 2026-05-01 18:26:26,342 | INFO     | current chi2=1.1105043707082243 (change=65.08747501361528 %)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,343 | INFO     | sum of square deviations: 20298507135.806465
[2026-05-01 20:27:25] 2026-05-01 18:26:26,348 | INFO     | sum of deviations: -130179859939.54831
[2026-05-01 20:27:25] 2026-05-01 18:26:26,348 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,348 | INFO     | mean y: 2529036.4640198513
[2026-05-01 20:27:25] 2026-05-01 18:26:26,348 | INFO     | intersect: 2529036.4640198513
[2026-05-01 20:27:25] 2026-05-01 18:26:26,349 | INFO     | chi2: 1.0495852576293534
[2026-05-01 20:27:25] 2026-05-01 18:26:26,349 | INFO     | current chi2=1.0495852576293534 (change=5.485715741939828 %)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,349 | INFO     | left removable region: 15
[2026-05-01 20:27:25] 2026-05-01 18:26:26,350 | INFO     | sum of square deviations: 19405385638.564175
[2026-05-01 20:27:25] 2026-05-01 18:26:26,354 | INFO     | sum of deviations: -101353276852.69508
[2026-05-01 20:27:25] 2026-05-01 18:26:26,354 | INFO     | mean x (centered): 0.0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,355 | INFO     | mean y: 2534874.314861461
[2026-05-01 20:27:25] 2026-05-01 18:26:26,355 | INFO     | intersect: 2534874.314861461
[2026-05-01 20:27:25] 2026-05-01 18:26:26,356 | INFO     | chi2: 0.2621672707094607
[2026-05-01 20:27:25] 2026-05-01 18:26:26,356 | INFO     | current memory leak: -5.22 B/s (using 397 data points, chi2=0.26)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,357 | INFO     | could have reported an average CPU frequency of 2250 MHz (18 samples)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,357 | INFO     | ..............................
[2026-05-01 20:27:25] 2026-05-01 18:26:26,357 | INFO     | . Timing measurements:
[2026-05-01 20:27:25] 2026-05-01 18:26:26,357 | INFO     | . get job = 0 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . initial setup = 135 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . payload setup = 218 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . stage-in = 0 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . payload execution = 25611 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . stage-out = 1 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | . log creation = 0 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,358 | INFO     | ..............................
[2026-05-01 20:27:25] 2026-05-01 18:26:26,465 | INFO     | 
[2026-05-01 20:27:25] 2026-05-01 18:26:26,465 | INFO     | job summary report
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | --------------------------------------------------
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | PanDA job id: 7123120100
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | task id: 50017298
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | errors: (none)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | pilot state: finished 
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | transexitcode: 0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | exeerrorcode: 0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | exeerrordiag: 
[2026-05-01 20:27:25] 2026-05-01 18:26:26,466 | INFO     | exitcode: 0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | exitmsg: OK
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | cpuconsumptiontime: 99193 s
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | nevents: 400
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | neventsw: 0
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | pid: 5916
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | pgrp: 5916
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | corecount: 8
[2026-05-01 20:27:25] 2026-05-01 18:26:26,467 | INFO     | event service: False
[2026-05-01 20:27:25] 2026-05-01 18:26:26,468 | INFO     | sizes: {0: 2275233, 1: 2275690, 2: 2277118, 12: 2277146, 25834: 2313336, 25836: 2322334, 25838: 2322518, 25839: 2322712}
[2026-05-01 20:27:25] 2026-05-01 18:26:26,468 | INFO     | --------------------------------------------------
[2026-05-01 20:27:25] 2026-05-01 18:26:26,468 | INFO     | 
[2026-05-01 20:27:25] 2026-05-01 18:26:26,468 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-05-01 20:27:25] 2026-05-01 18:26:26,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,497 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 20:27:25] 2026-05-01 18:26:26,497 | INFO     | job 7123120100 has completed (purged errors)
[2026-05-01 20:27:25] 2026-05-01 18:26:26,497 | INFO     | overall cleanup function is called
[2026-05-01 20:27:25] 2026-05-01 18:26:27,505 | INFO     | --- collectZombieJob: --- 10, [5916]
[2026-05-01 20:27:25] 2026-05-01 18:26:27,505 | INFO     | zombie collector waiting for pid 5916
[2026-05-01 20:27:25] 2026-05-01 18:26:27,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 20:27:25] 2026-05-01 18:26:27,505 | INFO     | collected zombie processes
[2026-05-01 20:27:25] 2026-05-01 18:26:27,506 | INFO     | will attempt to kill all subprocesses of pid=5916
[2026-05-01 20:27:25] 2026-05-01 18:26:27,554 | INFO     | process IDs to be killed: [5916] (in reverse order)
[2026-05-01 20:27:25] 2026-05-01 18:26:27,611 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 20:27:25] 2026-05-01 18:26:27,612 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 20:27:25] 2026-05-01 18:26:27,613 | INFO     | did not find any defunct processes belonging to 5916
[2026-05-01 20:27:25] 2026-05-01 18:26:27,615 | INFO     | did not find any defunct processes belonging to 5916
[2026-05-01 20:27:25] 2026-05-01 18:26:27,615 | INFO     | Ready for new job
[2026-05-01 20:27:25] 2026-05-01 18:26:27,617 | INFO     | ***************************************
[2026-05-01 20:27:25] 2026-05-01 18:26:27,617 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 20:27:25] 2026-05-01 18:26:27,617 | INFO     | ***************************************
[2026-05-01 20:27:25] 2026-05-01 18:26:27,617 | INFO     | 
[2026-05-01 20:27:25] 2026-05-01 18:26:27,618 | INFO     | pilot is running in a VM
[2026-05-01 20:27:25] 2026-05-01 18:26:27,618 | INFO     | architecture information:
[2026-05-01 20:27:25] 2026-05-01 18:26:27,618 | INFO     | executing command: cat /etc/os-release
[2026-05-01 20:27:25] 2026-05-01 18:26:27,647 | INFO     | cat /etc/os-release:
[2026-05-01 20:27:25] NAME="CentOS Linux"
[2026-05-01 20:27:25] VERSION="7 (Core)"
[2026-05-01 20:27:25] ID="centos"
[2026-05-01 20:27:25] ID_LIKE="rhel fedora"
[2026-05-01 20:27:25] VERSION_ID="7"
[2026-05-01 20:27:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 20:27:25] ANSI_COLOR="0;31"
[2026-05-01 20:27:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 20:27:25] HOME_URL="https://www.centos.org/"
[2026-05-01 20:27:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 20:27:25] 
[2026-05-01 20:27:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 20:27:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 20:27:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 20:27:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 20:27:25] 
[2026-05-01 20:27:25] 2026-05-01 18:26:27,647 | INFO     | ***************************************
[2026-05-01 20:27:25] 2026-05-01 18:26:28,151 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-05-01 20:27:25] 2026-05-01 18:26:28,170 | INFO     | sufficient remaining disk space (494194917376 B)
[2026-05-01 20:27:25] 2026-05-01 18:26:28,170 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 20:27:25] 2026-05-01 18:26:28,170 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 20:27:25] 2026-05-01 18:26:28,170 | INFO     | update_server=False
[2026-05-01 20:27:25] 2026-05-01 18:26:28,170 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 20:27:25] 2026-05-01 18:26:28,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 20:27:25] 2026-05-01 18:26:28,171 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 20:27:25] 2026-05-01 18:26:28,171 | INFO     | aborting loop
[2026-05-01 20:27:25] 2026-05-01 18:26:28,358 | INFO     | all job control threads have been joined
[2026-05-01 20:27:25] 2026-05-01 18:26:29,000 | INFO     | all payload control threads have been joined
[2026-05-01 20:27:25] 2026-05-01 18:26:29,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 20:27:25] 2026-05-01 18:26:29,067 | INFO     | all data control threads have been joined
[2026-05-01 20:27:25] 2026-05-01 18:26:29,176 | INFO     | [job] retrieve thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,177 | INFO     | [job] queue monitor thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,177 | INFO     | [job] job monitor thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,245 | INFO     | [payload] validate_post thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,364 | INFO     | [job] control thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,435 | INFO     | [payload] failed_post thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,773 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:29,863 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:30,005 | INFO     | [payload] control thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:30,073 | INFO     | [data] control thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:30,104 | INFO     | [job] validate thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:30,347 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:30,564 | INFO     | [data] copytool_in thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:31,013 | INFO     | [data] copytool_out thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:31,465 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 20:27:25] 2026-05-01 18:26:35,471 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:38,373 | INFO     | job.realtimelogging is not enabled
[2026-05-01 20:27:25] 2026-05-01 18:26:39,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 20:27:25] 2026-05-01 18:26:58,562 | INFO     | PID=1407 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-01 20:27:25] 2026-05-01 18:26:58,563 | INFO     | .. there are 2 such processes running
[2026-05-01 20:27:25] 2026-05-01 18:26:58,563 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 20:27:25] 2026-05-01 18:26:58,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 20:27:25] 2026-05-01 18:26:58,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 20:27:25] 2026-05-01 18:27:18,973 | INFO     | [monitor] cgroup control has ended
[2026-05-01 20:27:25] 2026-05-01 18:27:20,531 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291323172672)>', '<ExcThread(monitor, started 140290660751104)>']
[2026-05-01 20:27:25] 2026-05-01 18:27:20,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 20:27:25] 2026-05-01 18:27:20,665 | INFO     | [monitor] control thread has ended
[2026-05-01 20:27:25] 2026-05-01 18:27:25,557 | INFO     | all workflow threads have been joined
[2026-05-01 20:27:25] 2026-05-01 18:27:25,557 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 20:27:25] 2026-05-01 18:27:25,558 | INFO     | traces error code: 0
[2026-05-01 20:27:25] 2026-05-01 18:27:25,558 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 20:27:25] 2026-05-01 18:27:25,709 [wrapper] ==== pilot stdout END ====
[2026-05-01 20:27:25] 2026-05-01 18:27:25,713 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 20:27:25] 2026-05-01 18:27:25,717 [wrapper] pilotpid: 1407
[2026-05-01 20:27:25] 2026-05-01 18:27:25,722 [wrapper] Pilot exit status: 0
[2026-05-01 20:27:25] 2026-05-01 18:27:25,744 [wrapper] pandaids: 7123120100
[2026-05-01 20:27:25] 2026-05-01 18:27:25,781 [wrapper] cleanup supervisor_pilot 16014 1408
[2026-05-01 20:27:25] 2026-05-01 18:27:25,787 [wrapper] Test setup, not cleaning
[2026-05-01 20:27:25] 2026-05-01 18:27:25,791 [wrapper] apfmon messages muted
[2026-05-01 20:27:25] 2026-05-01 18:27:25,794 [wrapper] ==== wrapper stdout END ====
[2026-05-01 20:27:25] 2026-05-01 18:27:25,798 [wrapper] ==== wrapper stderr END ====
[2026-05-01 20:27:25]  *** Error codes and diagnostics ***
[2026-05-01 20:27:25]     "exeErrorCode": 0,
[2026-05-01 20:27:25]     "pilotErrorCode": 0,
[2026-05-01 20:27:25]  *** Listing of results directory ***
[2026-05-01 20:27:25] total 476668
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc    683926 May  1 02:21 pilot3.tar.gz
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc      5631 May  1 02:23 queuedata.json
[2026-05-01 20:27:25] -rwx------. 1 boinc boinc     36322 May  1 02:24 runpilot2-wrapper.sh
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc       100 May  1 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 20:27:25] -rwxr-xr-x. 1 boinc boinc      7986 May  1 13:08 run_atlas
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc       105 May  1 13:08 job.xml
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc 301643251 May  1 13:08 EVNT.50017294._000015.pool.root.1
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc      6306 May  1 13:08 init_data.xml
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc     15667 May  1 13:08 start_atlas.sh
[2026-05-01 20:27:25] drwxrwx--x. 2 boinc boinc        68 May  1 13:08 shared
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc    697394 May  1 13:08 input.tar.gz
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc         0 May  1 13:08 boinc_lockfile
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc      2530 May  1 13:08 pandaJob.out
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc       413 May  1 13:15 workernode_map.json
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc   1003015 May  1 13:15 agis_schedconf.cvmfs.json
[2026-05-01 20:27:25] drwx------. 5 boinc boinc      4096 May  1 13:15 pilot3
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc 176603423 May  1 20:25 HITS.50017298._000363.pool.root.1
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc       489 May  1 20:26 boinc_task_state.xml
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc      1009 May  1 20:26 memory_monitor_summary.json
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc        95 May  1 20:26 pilot_heartbeat.json
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc   1508687 May  1 20:26 agis_ddmendpoints.agis.ALL.json
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc    502269 May  1 20:26 log.50017298._000363.job.log.tgz.1
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc      6325 May  1 20:26 heartbeat_new.json
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc      6216 May  1 20:26 heartbeat.json
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc      8192 May  1 20:27 boinc_mmap_file
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc        28 May  1 20:27 wrapper_checkpoint.txt
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc      4954 May  1 20:27 pilotlog.txt
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc   2365123 May  1 20:27 log.50017298._000363.job.log.1
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc       357 May  1 20:27 output.list
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc       410 May  1 20:27 runtime_log
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc   2887680 May  1 20:27 result.tar.gz
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc      8439 May  1 20:27 runtime_log.err
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc       657 May  1 20:27 f2d72423f389.diag
[2026-05-01 20:27:25] -rw-r--r--. 1 boinc boinc     20666 May  1 20:27 stderr.txt
[2026-05-01 20:27:25] HITS file was successfully produced:
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc 176603423 May  1 20:25 shared/HITS.pool.root.1
[2026-05-01 20:27:25]  *** Contents of shared directory: ***
[2026-05-01 20:27:25] total 470564
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc 301643251 May  1 13:08 ATLAS.root_0
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc     15667 May  1 13:08 start_atlas.sh
[2026-05-01 20:27:25] -rw-r--r--. 2 boinc boinc    697394 May  1 13:08 input.tar.gz
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc 176603423 May  1 20:25 HITS.pool.root.1
[2026-05-01 20:27:25] -rw-------. 1 boinc boinc   2887680 May  1 20:27 result.tar.gz
20:27:27 (29825): run_atlas exited; CPU time 99447.239311
20:27:27 (29825): called boinc_finish(0)

</stderr_txt>
]]>

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