Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
2026-05-01 08:19:04 (2598064): vboxwrapper version 26210
2026-05-01 08:19:04 (2598064): BOINC client version: 8.2.9
2026-05-01 08:19:04 (2598064): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-05-01 08:19:04 (2598064): Successfully copied 'init_data.xml' to the shared directory.
2026-05-01 08:19:04 (2598064): Create VM. (boinc_74f16e870530f903, slot#185)
2026-05-01 08:19:04 (2598064): Setting Memory Size for VM. (4300MB)
2026-05-01 08:19:05 (2598064): Setting CPU Count for VM. (3)
2026-05-01 08:19:05 (2598064): Setting Chipset Options for VM.
2026-05-01 08:19:05 (2598064): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-05-01 08:19:05 (2598064): Setting Boot Options for VM.
2026-05-01 08:19:05 (2598064): Setting Network Configuration for NAT. (Driver: virtio)
2026-05-01 08:19:05 (2598064): Enabling VM Network Access.
2026-05-01 08:19:05 (2598064): Disabling USB Support for VM.
2026-05-01 08:19:05 (2598064): Disabling COM Port Support for VM.
2026-05-01 08:19:05 (2598064): Disabling LPT Port Support for VM.
2026-05-01 08:19:05 (2598064): Disabling Audio Support for VM.
2026-05-01 08:19:05 (2598064): Disabling Clipboard Support for VM.
2026-05-01 08:19:06 (2598064): Disabling Drag and Drop Support for VM.
2026-05-01 08:19:06 (2598064): Adding storage controller(s) to VM.
2026-05-01 08:19:06 (2598064): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-05-01 08:19:06 (2598064): Adding VirtualBox Guest Additions to VM.
2026-05-01 08:19:06 (2598064): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-05-01 08:19:06 (2598064): forwarding host port 45025 to guest port 80
2026-05-01 08:19:07 (2598064): Enabling remote desktop for VM.
2026-05-01 08:19:07 (2598064): Required extension pack not installed, remote desktop not enabled.
2026-05-01 08:19:07 (2598064): Enabling shared directory for VM.
2026-05-01 08:19:07 (2598064): Starting VM using VBoxManage interface. (boinc_74f16e870530f903, slot#185)
2026-05-01 08:19:08 (2598064): Successfully started VM. (PID = '2598718')
2026-05-01 08:19:08 (2598064): Reporting VM Process ID to BOINC.
2026-05-01 08:19:08 (2598064): Guest Log: BIOS: VirtualBox 7.1.6
2026-05-01 08:19:08 (2598064): Guest Log: CPUID EDX: 0x178bfbff
2026-05-01 08:19:08 (2598064): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-05-01 08:19:08 (2598064): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-05-01 08:19:08 (2598064): VM state change detected. (old = 'poweredoff', new = 'running')
2026-05-01 08:19:08 (2598064): Detected: Web Application Enabled (http://localhost:45025)
2026-05-01 08:19:08 (2598064): Preference change detected
2026-05-01 08:19:08 (2598064): Setting CPU throttle for VM. (50%)
2026-05-01 08:19:08 (2598064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-01 08:19:10 (2598064): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-05-01 08:19:10 (2598064): Guest Log: BIOS: Booting from Hard Disk...
2026-05-01 08:19:14 (2598064): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-05-01 08:19:14 (2598064): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-05-01 08:19:14 (2598064): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-05-01 08:19:22 (2598064): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-05-01 08:19:22 (2598064): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-05-01 08:19:30 (2598064): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000093 main     Log opened 2026-05-01T12:19:28.070712000Z
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000158 main     OS Product: Linux
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000170 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000179 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000188 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000189 main     Process ID: 1298
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000189 main     Package type: LINUX_64BITS_GENERIC
2026-05-01 08:19:30 (2598064): Guest Log: 00:00:00.000683 main     5.2.32 r132073 started. Verbose level = 0
2026-05-01 08:19:30 (2598064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-05-01 08:19:30 (2598064): Guest Log: [INFO] Mounting shared directory
2026-05-01 08:19:30 (2598064): Guest Log: [INFO] Checking for init_data.xml
2026-05-01 08:19:33 (2598064): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-05-01 08:19:33 (2598064): Guest Log: [INFO] Detected branch: prod
2026-05-01 08:19:33 (2598064): Guest Log: This is the prod version of the ATLAS job wrapper
2026-05-01 08:19:33 (2598064): Guest Log: Copying input files
2026-05-01 08:19:35 (2598064): Guest Log: Copied input files into RunAtlas.
2026-05-01 08:19:35 (2598064): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-05-01 08:19:35 (2598064): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-05-01 08:19:35 (2598064): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-05-01 08:19:35 (2598064): Guest Log: Further information can be found at the LHC@home message board.
2026-05-01 08:19:43 (2598064): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-05-01 08:19:44 (2598064): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-05-01 08:19:44 (2598064): Guest Log: 2.6.3.0 1573 0 32208 159094 4 1 3117648 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-05-01 08:19:44 (2598064): Guest Log: copied the webapp to /var/www
2026-05-01 08:19:44 (2598064): Guest Log: ATHENA_PROC_NUMBER=3
2026-05-01 08:19:44 (2598064): Guest Log: ATHENA_CORE_NUMBER=3
2026-05-01 08:19:45 (2598064): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-05-01 08:19:45 (2598064): Guest Log:  *** Starting ATLAS job. (PandaID=7123120149 taskID=50017259) ***
2026-05-01 09:58:08 (2598064): Status Report: Elapsed Time: '6000.000000'
2026-05-01 09:58:08 (2598064): Status Report: CPU Time: '8200.100000'
2026-05-01 11:35:30 (2598064): VM state change detected. (old = 'running', new = 'paused')
2026-05-01 15:28:33 (2598064): Preference change detected
2026-05-01 15:28:33 (2598064): Setting CPU throttle for VM. (50%)
2026-05-01 15:28:33 (2598064): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-05-01 15:28:34 (2598064): VM state change detected. (old = 'paused', new = 'running')
2026-05-01 15:28:38 (2598064): Guest Log: 03:16:05.794274 timesync vgsvcTimeSyncWorker: Radical host time change: 13 994 249 000 000ns (HostNow=1 777 663 717 861 000 000 ns HostLast=1 777 649 723 612 000 000 ns)
2026-05-01 15:28:48 (2598064): Guest Log: 03:16:15.818347 timesync vgsvcTimeSyncWorker: Radical guest time change: 13 994 397 693 000ns (GuestNow=1 777 663 728 073 646 000 ns GuestLast=1 777 649 733 675 953 000 ns fSetTimeLastLoop=true )
2026-05-01 15:30:14 (2598064): Status Report: Elapsed Time: '12000.000000'
2026-05-01 15:30:14 (2598064): Status Report: CPU Time: '16804.850000'
2026-05-01 17:09:14 (2598064): Status Report: Elapsed Time: '18000.000000'
2026-05-01 17:09:14 (2598064): Status Report: CPU Time: '25417.420000'
2026-05-01 18:48:15 (2598064): Status Report: Elapsed Time: '24000.000000'
2026-05-01 18:48:15 (2598064): Status Report: CPU Time: '34031.580000'
2026-05-01 19:38:08 (2598064): Guest Log:  *** Job finished ***
2026-05-01 19:38:08 (2598064): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:37:35,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:37:35,828 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:01,259 | INFO     | [monitor] cgroup control has ended
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:01,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139806042912576)>', '<ExcThread(monitor, started 139804800968448)>']
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:01,961 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:01,962 | INFO     | [monitor] control thread has ended
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:06,943 | INFO     | all workflow threads have been joined
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:06,944 | INFO     | end of generic workflow (traces error code: 0)
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:06,944 | INFO     | traces error code: 0
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:06,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,024 [wrapper] ==== pilot stdout END ====
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,029 [wrapper] ==== wrapper stdout RESUME ====
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,033 [wrapper] pilotpid: 5963
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,036 [wrapper] Pilot exit status: 0
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,104 [wrapper] pandaids: 7123120149
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,136 [wrapper] cleanup supervisor_pilot 32700 5964
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,140 [wrapper] Test setup, not cleaning
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,145 [wrapper] apfmon messages muted
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,149 [wrapper] ==== wrapper stdout END ====
2026-05-01 19:38:08 (2598064): Guest Log: 2026-05-01 23:38:07,152 [wrapper] ==== wrapper stderr END ====
2026-05-01 19:38:08 (2598064): Guest Log:  *** Error codes and diagnostics ***
2026-05-01 19:38:08 (2598064): Guest Log:     "exeErrorCode": 0,
2026-05-01 19:38:08 (2598064): Guest Log:     "pilotErrorCode": 0,
2026-05-01 19:38:08 (2598064): Guest Log:  *** Listing of results directory ***
2026-05-01 19:38:08 (2598064): Guest Log: total 180696
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas    683926 May  1 00:21 pilot3.tar.gz
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas      5631 May  1 00:23 queuedata.json
2026-05-01 19:38:08 (2598064): Guest Log: -rwx------. 1 atlas atlas     36322 May  1 00:24 runpilot2-wrapper.sh
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas    697398 May  1 12:19 input.tar.gz
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas     15667 May  1 12:19 start_atlas.sh
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas      8859 May  1 12:19 init_data.xml
2026-05-01 19:38:08 (2598064): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May  1 12:19 EVNT.50017255._000017.pool.root.1 -> /data/./ATLAS.root_0
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas      2528 May  1 12:19 pandaJob.out
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas   1003083 May  1 12:20 agis_schedconf.cvmfs.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas       408 May  1 12:20 workernode_map.json
2026-05-01 19:38:08 (2598064): Guest Log: drwx------. 5 atlas atlas      4096 May  1 12:20 pilot3
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas 175435416 May  1 23:36 HITS.50017259._000414.pool.root.1
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas      1027 May  1 23:36 memory_monitor_summary.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas   1508687 May  1 23:36 agis_ddmendpoints.agis.ALL.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas    426347 May  1 23:36 log.50017259._000414.job.log.tgz.1
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas      6330 May  1 23:37 heartbeat_new.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas      6221 May  1 23:37 heartbeat.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas        98 May  1 23:37 pilot_heartbeat.json
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas      4876 May  1 23:38 pilotlog.txt
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas   2337848 May  1 23:38 log.50017259._000414.job.log.1
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas       357 May  1 23:38 output.list
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas       410 May  1 23:38 runtime_log
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas   2785280 May  1 23:38 result.tar.gz
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 atlas atlas      8380 May  1 23:38 runtime_log.err
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas       663 May  1 23:38 f2d70ef6400f.diag
2026-05-01 19:38:08 (2598064): Guest Log: Looking for outputfile HITS.50017259._000414.pool.root.1
2026-05-01 19:38:08 (2598064): Guest Log: HITS file was successfully produced
2026-05-01 19:38:08 (2598064): Guest Log: -rw-------. 1 atlas atlas 175435416 May  1 23:36 /home/atlas/RunAtlas/HITS.50017259._000414.pool.root.1
2026-05-01 19:38:08 (2598064): Guest Log: Successfully finished the ATLAS job!
2026-05-01 19:38:08 (2598064): Guest Log: Copying the results back to the shared directory!
2026-05-01 19:38:08 (2598064): Guest Log:  *** Contents of shared directory: ***
2026-05-01 19:38:08 (2598064): Guest Log: total 299448
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 root root 303115884 May  1 12:19 ATLAS.root_0
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 root root      8859 May  1 12:19 init_data.xml
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 root root    697398 May  1 12:19 input.tar.gz
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 root root   2785280 May  1 23:38 result.tar.gz
2026-05-01 19:38:08 (2598064): Guest Log: -rw-r--r--. 1 root root     15667 May  1 12:19 start_atlas.sh
2026-05-01 19:38:08 (2598064): Guest Log:  *** Success! Shutting down the machine. ***
2026-05-01 19:38:08 (2598064): VM Completion File Detected.
2026-05-01 19:38:08 (2598064): Powering off VM.
2026-05-01 19:38:08 (2598064): Successfully stopped VM.
2026-05-01 19:38:08 (2598064): Deregistering VM. (boinc_74f16e870530f903, slot#185)
2026-05-01 19:38:08 (2598064): Removing network bandwidth throttle group from VM.
2026-05-01 19:38:08 (2598064): Removing VM from VirtualBox.
2026-05-01 19:38:13 (2598064): called boinc_finish(0)

</stderr_txt>
]]>

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