Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:45 (1224520): wrapper (7.7.26015): starting
00:02:45 (1224520): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 00:02:45] Arguments: --nthreads 8
[2026-05-01 00:02:45] Threads: 8
[2026-05-01 00:02:45] Checking for CVMFS
[2026-05-01 00:02:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 00:02:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 00:02:46] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 00:02:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 00:02:48] 2.13.3.0 9361 774 79464 159076 3 19 25758347 39288832 9183 16776704 0 278772 98.882 1244315 39379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-01 00:02:48] CVMFS is ok
[2026-05-01 00:02:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 00:02:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 00:02:49] Further information can be found at the LHC@home message board.
[2026-05-01 00:02:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 00:02:49] Checking for apptainer binary...
[2026-05-01 00:02:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 00:02:49] Running /usr/bin/apptainer --version
[2026-05-01 00:02:49] apptainer version 1.4.5-3.el9
[2026-05-01 00:02:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 00:02:49] c-211-31.aglt2.org
[2026-05-01 00:02:49] apptainer works
[2026-05-01 00:02:49] Set ATHENA_PROC_NUMBER=8
[2026-05-01 00:02:49] Set ATHENA_CORE_NUMBER=8
[2026-05-01 00:02:50] Starting ATLAS job with PandaID=7123014848
[2026-05-01 00:02:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:27:29 (3117960): wrapper (7.7.26015): starting
21:27:29 (3117960): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 21:27:29] Arguments: --nthreads 8
[2026-05-01 21:27:29] Threads: 8
[2026-05-01 21:27:29] This job has been restarted, cleaning up previous attempt
[2026-05-01 21:27:29] Checking for CVMFS
[2026-05-01 21:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 21:27:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 21:27:29] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 21:27:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 21:27:30] 2.13.3.0 9361 2059 96728 159114 1 13 30874641 39288833 8736 16776704 0 919192 99.358 1833180 34306 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-05-01 21:27:30] CVMFS is ok
[2026-05-01 21:27:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 21:27:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 21:27:30] Further information can be found at the LHC@home message board.
[2026-05-01 21:27:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 21:27:30] Checking for apptainer binary...
[2026-05-01 21:27:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 21:27:30] Running /usr/bin/apptainer --version
[2026-05-01 21:27:30] apptainer version 1.4.5-3.el9
[2026-05-01 21:27:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 21:27:30] c-211-31.aglt2.org
[2026-05-01 21:27:30] apptainer works
[2026-05-01 21:27:30] Set ATHENA_PROC_NUMBER=8
[2026-05-01 21:27:30] Set ATHENA_CORE_NUMBER=8
[2026-05-01 21:27:30] Starting ATLAS job with PandaID=7123014848
[2026-05-01 21:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-02 21:54:16]  *** The last 200 lines of the pilot log: ***
[2026-05-02 21:54:16] 2026-05-03 01:53:44,325 | INFO     | this job has now completed (state=finished)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,325 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,325 | INFO     | log transfer has been attempted: DONE
[2026-05-02 21:54:16] 2026-05-03 01:53:44,326 | INFO     | job 7123014848 has finished - writing final server update
[2026-05-02 21:54:16] 2026-05-03 01:53:44,326 | INFO     | total number of processed events: 400 (read)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,335 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-7123014848/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,336 | INFO     | extracted standard info from prmon json
[2026-05-02 21:54:16] 2026-05-03 01:53:44,336 | INFO     | extracted standard memory fields from prmon json
[2026-05-02 21:54:16] 2026-05-03 01:53:44,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-02 21:54:16] 2026-05-03 01:53:44,337 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-02 21:54:16] 2026-05-03 01:53:44,374 | INFO     | fitting pss+swap vs Time
[2026-05-02 21:54:16] 2026-05-03 01:53:44,377 | INFO     | sum of square deviations: 927804699532.7648
[2026-05-02 21:54:16] 2026-05-03 01:53:44,435 | INFO     | sum of deviations: 958070732222.8694
[2026-05-02 21:54:16] 2026-05-03 01:53:44,436 | INFO     | mean x (centered): 0.0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,436 | INFO     | mean y: 2536587.8834142955
[2026-05-02 21:54:16] 2026-05-03 01:53:44,436 | INFO     | intersect: 2536587.8834142955
[2026-05-02 21:54:16] 2026-05-03 01:53:44,438 | INFO     | chi2: 2.136083271884001
[2026-05-02 21:54:16] 2026-05-03 01:53:44,441 | INFO     | sum of square deviations: 918180436421.424
[2026-05-02 21:54:16] 2026-05-03 01:53:44,498 | INFO     | sum of deviations: 949072315855.3903
[2026-05-02 21:54:16] 2026-05-03 01:53:44,499 | INFO     | mean x (centered): 0.0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,499 | INFO     | mean y: 2536445.302228412
[2026-05-02 21:54:16] 2026-05-03 01:53:44,499 | INFO     | intersect: 2536445.302228412
[2026-05-02 21:54:16] 2026-05-03 01:53:44,501 | INFO     | chi2: 2.136119348984828
[2026-05-02 21:54:16] 2026-05-03 01:53:44,502 | INFO     | current chi2=2.136119348984828 (change=-0.0016889370045664739 %)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,502 | INFO     | right removable region: 1435
[2026-05-02 21:54:16] 2026-05-03 01:53:44,504 | INFO     | sum of square deviations: 918179448221.4236
[2026-05-02 21:54:16] 2026-05-03 01:53:44,562 | INFO     | sum of deviations: 651997361919.9653
[2026-05-02 21:54:16] 2026-05-03 01:53:44,563 | INFO     | mean x (centered): 0.0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,563 | INFO     | mean y: 2541432.0355153205
[2026-05-02 21:54:16] 2026-05-03 01:53:44,563 | INFO     | intersect: 2541432.0355153205
[2026-05-02 21:54:16] 2026-05-03 01:53:44,565 | INFO     | chi2: 0.14967978502974638
[2026-05-02 21:54:16] 2026-05-03 01:53:44,566 | INFO     | current chi2=0.14967978502974638 (change=92.99279260317738 %)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,568 | INFO     | sum of square deviations: 908621076213.3019
[2026-05-02 21:54:16] 2026-05-03 01:53:44,605 | INFO     | sum of deviations: 607585790384.8816
[2026-05-02 21:54:16] 2026-05-03 01:53:44,605 | INFO     | mean x (centered): 0.0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,605 | INFO     | mean y: 2542140.4102026555
[2026-05-02 21:54:16] 2026-05-03 01:53:44,605 | INFO     | intersect: 2542140.4102026555
[2026-05-02 21:54:16] 2026-05-03 01:53:44,607 | INFO     | chi2: 0.1242524566773545
[2026-05-02 21:54:16] 2026-05-03 01:53:44,607 | INFO     | current chi2=0.1242524566773545 (change=16.987817257579984 %)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,607 | INFO     | left removable region: 10
[2026-05-02 21:54:16] 2026-05-03 01:53:44,608 | INFO     | sum of square deviations: 897239861394.8606
[2026-05-02 21:54:16] 2026-05-03 01:53:44,641 | INFO     | sum of deviations: 598306996718.2844
[2026-05-02 21:54:16] 2026-05-03 01:53:44,641 | INFO     | mean x (centered): 0.0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,642 | INFO     | mean y: 2541991.216140351
[2026-05-02 21:54:16] 2026-05-03 01:53:44,642 | INFO     | intersect: 2541991.216140351
[2026-05-02 21:54:16] 2026-05-03 01:53:44,643 | INFO     | chi2: 0.12420879683915788
[2026-05-02 21:54:16] 2026-05-03 01:53:44,643 | INFO     | current memory leak: 0.67 B/s (using 1425 data points, chi2=0.12)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,646 | INFO     | could have reported an average CPU frequency of 2899 MHz (52 samples)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,646 | INFO     | ..............................
[2026-05-02 21:54:16] 2026-05-03 01:53:44,646 | INFO     | . Timing measurements:
[2026-05-02 21:54:16] 2026-05-03 01:53:44,647 | INFO     | . get job = 0 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,647 | INFO     | . initial setup = 3 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,647 | INFO     | . payload setup = 27 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,647 | INFO     | . stage-in = 0 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,647 | INFO     | . payload execution = 87902 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,648 | INFO     | . stage-out = 2 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,648 | INFO     | . log creation = 0 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,648 | INFO     | ..............................
[2026-05-02 21:54:16] 2026-05-03 01:53:44,799 | INFO     | 
[2026-05-02 21:54:16] 2026-05-03 01:53:44,799 | INFO     | job summary report
[2026-05-02 21:54:16] 2026-05-03 01:53:44,799 | INFO     | --------------------------------------------------
[2026-05-02 21:54:16] 2026-05-03 01:53:44,799 | INFO     | PanDA job id: 7123014848
[2026-05-02 21:54:16] 2026-05-03 01:53:44,800 | INFO     | task id: 50017195
[2026-05-02 21:54:16] 2026-05-03 01:53:44,800 | INFO     | errors: (none)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-02 21:54:16] 2026-05-03 01:53:44,800 | INFO     | pilot state: finished 
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | transexitcode: 0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | exeerrorcode: 0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | exeerrordiag: 
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | exitcode: 0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | exitmsg: OK
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | cpuconsumptiontime: 139478 s
[2026-05-02 21:54:16] 2026-05-03 01:53:44,801 | INFO     | nevents: 400
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | neventsw: 0
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | pid: 3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | pgrp: 3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | corecount: 8
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | event service: False
[2026-05-02 21:54:16] 2026-05-03 01:53:44,802 | INFO     | sizes: {0: 2274630, 1: 2275315, 2: 2277144, 3: 2277144, 87933: 2342034, 87936: 2351032, 87937: 2351216, 87939: 2351410}
[2026-05-02 21:54:16] 2026-05-03 01:53:44,803 | INFO     | --------------------------------------------------
[2026-05-02 21:54:16] 2026-05-03 01:53:44,803 | INFO     | 
[2026-05-02 21:54:16] 2026-05-03 01:53:44,803 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-05-02 21:54:16] 2026-05-03 01:53:44,832 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,833 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,834 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,834 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,835 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,835 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,835 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,835 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,838 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,839 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-02 21:54:16] 2026-05-03 01:53:44,840 | INFO     | job 7123014848 has completed (purged errors)
[2026-05-02 21:54:16] 2026-05-03 01:53:44,840 | INFO     | overall cleanup function is called
[2026-05-02 21:54:16] 2026-05-03 01:53:45,050 | WARNING  | process 3132325 can no longer be monitored (due to stat problems) - aborting
[2026-05-02 21:54:16] 2026-05-03 01:53:45,203 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 21:54:16] 2026-05-03 01:53:45,203 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-05-02 21:54:16] 2026-05-03 01:53:45,204 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-02 21:54:16] 2026-05-03 01:53:45,204 | WARNING  | maxPSS not found in memory monitor output
[2026-05-02 21:54:16] 2026-05-03 01:53:45,419 | INFO     | number of running child processes to parent process 3132325: 1
[2026-05-02 21:54:16] 2026-05-03 01:53:45,419 | INFO     | maximum number of monitored processes: 6
[2026-05-02 21:54:16] 2026-05-03 01:53:45,419 | INFO     | aborting job monitoring since job object (job id=7123014848) has expired
[2026-05-02 21:54:16] 2026-05-03 01:53:45,851 | INFO     | --- collectZombieJob: --- 10, [3132325]
[2026-05-02 21:54:16] 2026-05-03 01:53:45,851 | INFO     | zombie collector waiting for pid 3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:45,852 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-02 21:54:16] 2026-05-03 01:53:45,852 | INFO     | collected zombie processes
[2026-05-02 21:54:16] 2026-05-03 01:53:45,852 | INFO     | will attempt to kill all subprocesses of pid=3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:46,059 | INFO     | process IDs to be killed: [3132325] (in reverse order)
[2026-05-02 21:54:16] 2026-05-03 01:53:46,135 | WARNING  | found no corresponding commands to process id(s)
[2026-05-02 21:54:16] 2026-05-03 01:53:46,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-02 21:54:16] 2026-05-03 01:53:46,147 | INFO     | did not find any defunct processes belonging to 3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:46,158 | INFO     | did not find any defunct processes belonging to 3132325
[2026-05-02 21:54:16] 2026-05-03 01:53:46,158 | INFO     | Ready for new job
[2026-05-02 21:54:16] 2026-05-03 01:53:46,164 | INFO     | ***************************************
[2026-05-02 21:54:16] 2026-05-03 01:53:46,164 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-02 21:54:16] 2026-05-03 01:53:46,164 | INFO     | ***************************************
[2026-05-02 21:54:16] 2026-05-03 01:53:46,164 | INFO     | 
[2026-05-02 21:54:16] 2026-05-03 01:53:46,166 | INFO     | architecture information:
[2026-05-02 21:54:16] 2026-05-03 01:53:46,167 | INFO     | executing command: cat /etc/os-release
[2026-05-02 21:54:16] 2026-05-03 01:53:46,183 | INFO     | cat /etc/os-release:
[2026-05-02 21:54:16] NAME="CentOS Linux"
[2026-05-02 21:54:16] VERSION="7 (Core)"
[2026-05-02 21:54:16] ID="centos"
[2026-05-02 21:54:16] ID_LIKE="rhel fedora"
[2026-05-02 21:54:16] VERSION_ID="7"
[2026-05-02 21:54:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-02 21:54:16] ANSI_COLOR="0;31"
[2026-05-02 21:54:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-02 21:54:16] HOME_URL="https://www.centos.org/"
[2026-05-02 21:54:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-02 21:54:16] 
[2026-05-02 21:54:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-02 21:54:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-02 21:54:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-02 21:54:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-02 21:54:16] 
[2026-05-02 21:54:16] 2026-05-03 01:53:46,183 | INFO     | ***************************************
[2026-05-02 21:54:16] 2026-05-03 01:53:46,685 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-05-02 21:54:16] 2026-05-03 01:53:46,700 | INFO     | sufficient remaining disk space (53636759552 B)
[2026-05-02 21:54:16] 2026-05-03 01:53:46,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-02 21:54:16] 2026-05-03 01:53:46,701 | INFO     | current server update state: UPDATING_FINAL
[2026-05-02 21:54:16] 2026-05-03 01:53:46,701 | INFO     | update_server=False
[2026-05-02 21:54:16] 2026-05-03 01:53:46,701 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-02 21:54:16] 2026-05-03 01:53:46,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-02 21:54:16] 2026-05-03 01:53:46,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-02 21:54:16] 2026-05-03 01:53:46,702 | INFO     | aborting loop
[2026-05-02 21:54:16] 2026-05-03 01:53:46,799 | INFO     | all payload control threads have been joined
[2026-05-02 21:54:16] 2026-05-03 01:53:47,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-02 21:54:16] 2026-05-03 01:53:47,410 | INFO     | all job control threads have been joined
[2026-05-02 21:54:16] 2026-05-03 01:53:47,685 | INFO     | all data control threads have been joined
[2026-05-02 21:54:16] 2026-05-03 01:53:47,693 | INFO     | [monitor] cgroup control has ended
[2026-05-02 21:54:16] 2026-05-03 01:53:47,706 | INFO     | [job] retrieve thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,707 | INFO     | [job] queue monitor thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,708 | INFO     | [job] job monitor thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,804 | INFO     | [payload] control thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,836 | INFO     | [data] copytool_in thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,887 | INFO     | [job] create_data_payload thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:47,992 | INFO     | [job] validate thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,044 | INFO     | [payload] validate_pre thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,234 | INFO     | [payload] failed_post thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,235 | INFO     | [payload] validate_post thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,340 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,415 | INFO     | [job] control thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,690 | INFO     | [data] control thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:48,911 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-02 21:54:16] 2026-05-03 01:53:49,034 | INFO     | [data] copytool_out thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:49,037 | INFO     | [payload] execute_payloads thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:52,918 | INFO     | [data] queue_monitor thread has finished
[2026-05-02 21:54:16] 2026-05-03 01:53:54,675 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140478134617920)>', '<ExcThread(monitor, started 140477701547776)>']
[2026-05-02 21:54:16] 2026-05-03 01:53:59,701 | INFO     | all workflow threads have been joined
[2026-05-02 21:54:16] 2026-05-03 01:53:59,701 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-02 21:54:16] 2026-05-03 01:53:59,701 | INFO     | traces error code: 0
[2026-05-02 21:54:16] 2026-05-03 01:53:59,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-02 21:54:16] 2026-05-03 01:54:16,553 | INFO     | PID=3125287 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-02 21:54:16] 2026-05-03 01:54:16,555 | INFO     | .. there are 6 such processes running
[2026-05-02 21:54:16] 2026-05-03 01:54:16,557 | INFO     | found 0 job(s) in 20 queues
[2026-05-02 21:54:16] 2026-05-03 01:54:16,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-02 21:54:16] 2026-05-03 01:54:16,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-02 21:54:16] 2026-05-03 01:54:16,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-02 21:54:16] 2026-05-03 01:54:16,558 | INFO     | [monitor] control thread has ended
[2026-05-02 21:54:16] 2026-05-03 01:54:16,770 [wrapper] ==== pilot stdout END ====
[2026-05-02 21:54:16] 2026-05-03 01:54:16,774 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-02 21:54:16] 2026-05-03 01:54:16,777 [wrapper] pilotpid: 3125287
[2026-05-02 21:54:16] 2026-05-03 01:54:16,781 [wrapper] Pilot exit status: 0
[2026-05-02 21:54:16] 2026-05-03 01:54:16,793 [wrapper] pandaids: 7123014848 7123014848
[2026-05-02 21:54:16] 2026-05-03 01:54:16,850 [wrapper] cleanup supervisor_pilot 1024166 3125288
[2026-05-02 21:54:16] 2026-05-03 01:54:16,853 [wrapper] Test setup, not cleaning
[2026-05-02 21:54:16] 2026-05-03 01:54:16,858 [wrapper] apfmon messages muted
[2026-05-02 21:54:16] 2026-05-03 01:54:16,861 [wrapper] ==== wrapper stdout END ====
[2026-05-02 21:54:16] 2026-05-03 01:54:16,865 [wrapper] ==== wrapper stderr END ====
[2026-05-02 21:54:16]  *** Error codes and diagnostics ***
[2026-05-02 21:54:16]     "exeErrorCode": 0,
[2026-05-02 21:54:16]     "pilotErrorCode": 0,
[2026-05-02 21:54:16]  *** Listing of results directory ***
[2026-05-02 21:54:16] total 784616
[2026-05-02 21:54:16] drwx------. 5 boincer umatlas      4096 Apr 22 05:13 pilot3
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 19:29 queuedata.json
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 19:29 pilot3.tar.gz
[2026-05-02 21:54:16] -rwx------. 1 boincer umatlas     36322 Apr 30 19:29 runpilot2-wrapper.sh
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas       100 May  1 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-02 21:54:16] -rwxr-xr-x. 1 boincer umatlas      7986 May  1 00:02 run_atlas
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas       105 May  1 00:02 job.xml
[2026-05-02 21:54:16] -rw-r--r--. 3 boincer umatlas 303352886 May  1 00:02 EVNT.50017191._000022.pool.root.1
[2026-05-02 21:54:16] -rw-r--r--. 3 boincer umatlas 303352886 May  1 00:02 ATLAS.root_0
[2026-05-02 21:54:16] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:02 start_atlas.sh
[2026-05-02 21:54:16] drwxrwx--x. 2 boincer umatlas      4096 May  1 00:02 shared
[2026-05-02 21:54:16] -rw-r--r--. 2 boincer umatlas    697397 May  1 00:02 input.tar.gz
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas         0 May  1 00:02 boinc_lockfile
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas      2529 May  1 21:27 pandaJob.out
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas        57 May  1 21:27 setup.sh.local
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas   1002984 May  1 21:27 agis_schedconf.cvmfs.json
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas       442 May  1 21:28 workernode_map.json
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas      6443 May  2 21:49 init_data.xml
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas 176377916 May  2 21:53 HITS.50017195._000503.pool.root.1
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas       492 May  2 21:53 boinc_task_state.xml
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas      1045 May  2 21:53 memory_monitor_summary.json
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas   1508687 May  2 21:53 agis_ddmendpoints.agis.ALL.json
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas    993917 May  2 21:53 log.50017195._000503.job.log.tgz.1
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas      6407 May  2 21:53 heartbeat_new.json
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas      6298 May  2 21:53 heartbeat.json
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas      8192 May  2 21:54 boinc_mmap_file
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas        30 May  2 21:54 wrapper_checkpoint.txt
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas        96 May  2 21:54 pilot_heartbeat.json
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas       822 May  2 21:54 pilotlog.txt
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas   7121697 May  2 21:54 log.50017195._000503.job.log.1
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas       357 May  2 21:54 output.list
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas       410 May  2 21:54 runtime_log
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas   8130560 May  2 21:54 result.tar.gz
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas      9050 May  2 21:54 runtime_log.err
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas       784 May  2 21:54 e5c5a40d1985.diag
[2026-05-02 21:54:16] -rw-r--r--. 1 boincer umatlas     23431 May  2 21:54 stderr.txt
[2026-05-02 21:54:16] HITS file was successfully produced:
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas 176377916 May  2 21:53 shared/HITS.pool.root.1
[2026-05-02 21:54:16]  *** Contents of shared directory: ***
[2026-05-02 21:54:16] total 477136
[2026-05-02 21:54:16] -rw-r--r--. 3 boincer umatlas 303352886 May  1 00:02 ATLAS.root_0
[2026-05-02 21:54:16] -rw-r--r--. 2 boincer umatlas     15667 May  1 00:02 start_atlas.sh
[2026-05-02 21:54:16] -rw-r--r--. 2 boincer umatlas    697397 May  1 00:02 input.tar.gz
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas 176377916 May  2 21:53 HITS.pool.root.1
[2026-05-02 21:54:16] -rw-------. 1 boincer umatlas   8130560 May  2 21:54 result.tar.gz
21:54:18 (3117960): run_atlas exited; CPU time 142604.743353
21:54:18 (3117960): called boinc_finish(0)

</stderr_txt>
]]>

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