Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:47:44 (2469057): wrapper (7.7.26015): starting
21:47:44 (2469057): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 21:47:44] Arguments: --nthreads 8
[2026-04-30 21:47:44] Threads: 8
[2026-04-30 21:47:44] Checking for CVMFS
[2026-04-30 21:47:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 21:47:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 21:47:44] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 21:47:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 21:47:45] 2.13.3.0 13132 718 100828 159072 2 86 28925855 32935936 17718 16776704 0 3660133 99.586 4241810 16965 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 21:47:45] CVMFS is ok
[2026-04-30 21:47:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 21:47:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 21:47:45] Further information can be found at the LHC@home message board.
[2026-04-30 21:47:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 21:47:45] Checking for apptainer binary...
[2026-04-30 21:47:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 21:47:45] Running /usr/bin/apptainer --version
[2026-04-30 21:47:45] apptainer version 1.4.5-3.el9
[2026-04-30 21:47:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 21:47:45] c6-2-11-3.aglt2.org
[2026-04-30 21:47:45] apptainer works
[2026-04-30 21:47:45] Set ATHENA_PROC_NUMBER=8
[2026-04-30 21:47:45] Set ATHENA_CORE_NUMBER=8
[2026-04-30 21:48:05] Starting ATLAS job with PandaID=7123090159
[2026-04-30 21:48:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 01:43:15]  *** The last 200 lines of the pilot log: ***
[2026-05-01 01:43:15] 2026-05-01 05:35:57,244 | INFO     | this job has now completed (state=finished)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,244 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,245 | INFO     | log transfer has been attempted: DONE
[2026-05-01 01:43:15] 2026-05-01 05:35:57,245 | INFO     | job 7123090159 has finished - writing final server update
[2026-05-01 01:43:15] 2026-05-01 05:35:57,255 | INFO     | total number of processed events: 400 (read)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,341 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7123090159/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,342 | INFO     | extracted standard info from prmon json
[2026-05-01 01:43:15] 2026-05-01 05:35:57,343 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 01:43:15] 2026-05-01 05:35:57,344 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 01:43:15] 2026-05-01 05:35:57,344 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 01:43:15] 2026-05-01 05:35:57,370 | INFO     | fitting pss+swap vs Time
[2026-05-01 01:43:15] 2026-05-01 05:35:57,371 | INFO     | sum of square deviations: 3485485871.7142777
[2026-05-01 01:43:15] 2026-05-01 05:35:57,372 | INFO     | sum of deviations: 6048748.571411133
[2026-05-01 01:43:15] 2026-05-01 05:35:57,372 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,372 | INFO     | mean y: 2516506.4285714286
[2026-05-01 01:43:15] 2026-05-01 05:35:57,373 | INFO     | intersect: 2516506.4285714286
[2026-05-01 01:43:15] 2026-05-01 05:35:57,373 | INFO     | chi2: 2.775666523262535
[2026-05-01 01:43:15] 2026-05-01 05:35:57,399 | INFO     | sum of square deviations: 3257282674.8767157
[2026-05-01 01:43:15] 2026-05-01 05:35:57,400 | INFO     | sum of deviations: 28326698827.643837
[2026-05-01 01:43:15] 2026-05-01 05:35:57,400 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,400 | INFO     | mean y: 2535172.164383562
[2026-05-01 01:43:15] 2026-05-01 05:35:57,401 | INFO     | intersect: 2535172.164383562
[2026-05-01 01:43:15] 2026-05-01 05:35:57,401 | INFO     | chi2: 1.3694186878251986
[2026-05-01 01:43:15] 2026-05-01 05:35:57,401 | INFO     | current chi2=1.3694186878251986 (change=50.66342889723021 %)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,401 | INFO     | sum of square deviations: 3039226485.233665
[2026-05-01 01:43:15] 2026-05-01 05:35:57,407 | INFO     | sum of deviations: 27665034620.719627
[2026-05-01 01:43:15] 2026-05-01 05:35:57,407 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,407 | INFO     | mean y: 2534709.3691588785
[2026-05-01 01:43:15] 2026-05-01 05:35:57,407 | INFO     | intersect: 2534709.3691588785
[2026-05-01 01:43:15] 2026-05-01 05:35:57,408 | INFO     | chi2: 1.370094656001211
[2026-05-01 01:43:15] 2026-05-01 05:35:57,408 | INFO     | current chi2=1.370094656001211 (change=-0.04936168770166065 %)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,408 | INFO     | right removable region: 213
[2026-05-01 01:43:15] 2026-05-01 05:35:57,408 | INFO     | sum of square deviations: 3257257421.2968035
[2026-05-01 01:43:15] 2026-05-01 05:35:57,410 | INFO     | sum of deviations: -32659545791.726013
[2026-05-01 01:43:15] 2026-05-01 05:35:57,410 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,410 | INFO     | mean y: 2538109.808219178
[2026-05-01 01:43:15] 2026-05-01 05:35:57,414 | INFO     | intersect: 2538109.808219178
[2026-05-01 01:43:15] 2026-05-01 05:35:57,415 | INFO     | chi2: 1.4558133821846613
[2026-05-01 01:43:15] 2026-05-01 05:35:57,415 | INFO     | current chi2=1.4558133821846613 (change=47.55085418281841 %)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,415 | INFO     | sum of square deviations: 3039215208.3598175
[2026-05-01 01:43:15] 2026-05-01 05:35:57,416 | INFO     | sum of deviations: -28456107857.66822
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | mean y: 2535162.6588785048
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | intersect: 2535162.6588785048
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | chi2: 1.4493132255733343
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | current chi2=1.4493132255733343 (change=0.4464965558684817 %)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,417 | INFO     | left removable region: 10
[2026-05-01 01:43:15] 2026-05-01 05:35:57,418 | INFO     | sum of square deviations: 2594253657.852199
[2026-05-01 01:43:15] 2026-05-01 05:35:57,423 | INFO     | sum of deviations: -765163549.3103441
[2026-05-01 01:43:15] 2026-05-01 05:35:57,423 | INFO     | mean x (centered): 0.0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,423 | INFO     | mean y: 2555174.3103448274
[2026-05-01 01:43:15] 2026-05-01 05:35:57,423 | INFO     | intersect: 2555174.3103448274
[2026-05-01 01:43:15] 2026-05-01 05:35:57,424 | INFO     | chi2: 0.01155892625152202
[2026-05-01 01:43:15] 2026-05-01 05:35:57,424 | INFO     | current memory leak: -0.29 B/s (using 203 data points, chi2=0.01)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | could have reported an average CPU frequency of 2766 MHz (11 samples)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | ..............................
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . Timing measurements:
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . get job = 0 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . initial setup = 8 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . payload setup = 12 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . stage-in = 0 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . payload execution = 13614 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . stage-out = 5 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,425 | INFO     | . log creation = 0 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,426 | INFO     | ..............................
[2026-05-01 01:43:15] 2026-05-01 05:35:57,636 | INFO     | 
[2026-05-01 01:43:15] 2026-05-01 05:35:57,637 | INFO     | job summary report
[2026-05-01 01:43:15] 2026-05-01 05:35:57,637 | INFO     | --------------------------------------------------
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | PanDA job id: 7123090159
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | task id: 49860732
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | errors: (none)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | pilot state: finished 
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | transexitcode: 0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | exeerrorcode: 0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | exeerrordiag: 
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | exitcode: 0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | exitmsg: OK
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | cpuconsumptiontime: 45207 s
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | nevents: 400
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | neventsw: 0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,638 | INFO     | pid: 2478259
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | pgrp: 2478259
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | corecount: 8
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | event service: False
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | sizes: {0: 2276489, 1: 2278318, 12: 2278318, 13630: 2308668, 13637: 2317666, 13638: 2318044}
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | --------------------------------------------------
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | 
[2026-05-01 01:43:15] 2026-05-01 05:35:57,639 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-05-01 01:43:15] 2026-05-01 05:35:57,731 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,732 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | job 7123090159 has completed (purged errors)
[2026-05-01 01:43:15] 2026-05-01 05:35:57,740 | INFO     | overall cleanup function is called
[2026-05-01 01:43:15] 2026-05-01 05:35:58,774 | INFO     | --- collectZombieJob: --- 10, [2478259]
[2026-05-01 01:43:15] 2026-05-01 05:35:58,774 | INFO     | zombie collector waiting for pid 2478259
[2026-05-01 01:43:15] 2026-05-01 05:35:58,774 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 01:43:15] 2026-05-01 05:35:58,775 | INFO     | collected zombie processes
[2026-05-01 01:43:15] 2026-05-01 05:35:58,775 | INFO     | will attempt to kill all subprocesses of pid=2478259
[2026-05-01 01:43:15] 2026-05-01 05:36:04,876 | INFO     | process IDs to be killed: [2478259] (in reverse order)
[2026-05-01 01:43:15] 2026-05-01 05:36:05,252 | INFO     | PID=2473735 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-01 01:43:15] 2026-05-01 05:36:05,253 | INFO     | .. there are 30 such processes running
[2026-05-01 01:43:15] 2026-05-01 05:36:05,364 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 01:43:15] 2026-05-01 05:36:05,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 01:43:15] 2026-05-01 05:36:05,460 | INFO     | did not find any defunct processes belonging to 2478259
[2026-05-01 01:43:15] 2026-05-01 05:36:05,558 | INFO     | did not find any defunct processes belonging to 2478259
[2026-05-01 01:43:15] 2026-05-01 05:36:05,558 | INFO     | Ready for new job
[2026-05-01 01:43:15] 2026-05-01 05:36:05,560 | INFO     | ***************************************
[2026-05-01 01:43:15] 2026-05-01 05:36:05,560 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 01:43:15] 2026-05-01 05:36:05,560 | INFO     | ***************************************
[2026-05-01 01:43:15] 2026-05-01 05:36:05,560 | INFO     | 
[2026-05-01 01:43:15] 2026-05-01 05:36:05,566 | INFO     | architecture information:
[2026-05-01 01:43:15] 2026-05-01 05:36:05,566 | INFO     | executing command: cat /etc/os-release
[2026-05-01 01:43:15] 2026-05-01 05:36:05,681 | INFO     | cat /etc/os-release:
[2026-05-01 01:43:15] NAME="CentOS Linux"
[2026-05-01 01:43:15] VERSION="7 (Core)"
[2026-05-01 01:43:15] ID="centos"
[2026-05-01 01:43:15] ID_LIKE="rhel fedora"
[2026-05-01 01:43:15] VERSION_ID="7"
[2026-05-01 01:43:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 01:43:15] ANSI_COLOR="0;31"
[2026-05-01 01:43:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 01:43:15] HOME_URL="https://www.centos.org/"
[2026-05-01 01:43:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 01:43:15] 
[2026-05-01 01:43:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 01:43:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 01:43:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 01:43:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 01:43:15] 
[2026-05-01 01:43:15] 2026-05-01 05:36:05,681 | INFO     | ***************************************
[2026-05-01 01:43:15] 2026-05-01 05:36:06,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-05-01 01:43:15] 2026-05-01 05:36:06,241 | INFO     | sufficient remaining disk space (68873617408 B)
[2026-05-01 01:43:15] 2026-05-01 05:36:06,242 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 01:43:15] 2026-05-01 05:36:06,242 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 01:43:15] 2026-05-01 05:36:06,242 | INFO     | update_server=False
[2026-05-01 01:43:15] 2026-05-01 05:36:06,242 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 01:43:15] 2026-05-01 05:36:06,242 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | INFO     | aborting loop
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 01:43:15] 2026-05-01 05:36:06,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 01:43:15] 2026-05-01 05:36:06,779 | INFO     | all job control threads have been joined
[2026-05-01 01:43:15] 2026-05-01 05:36:06,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 01:43:15] 2026-05-01 05:36:07,248 | INFO     | [job] retrieve thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,252 | INFO     | [job] job monitor thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,270 | INFO     | all data control threads have been joined
[2026-05-01 01:43:15] 2026-05-01 05:36:07,308 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,309 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,309 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,535 | INFO     | all payload control threads have been joined
[2026-05-01 01:43:15] 2026-05-01 05:36:07,772 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,784 | INFO     | [job] control thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,827 | INFO     | [payload] validate_post thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:07,828 | INFO     | [job] queue monitor thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,186 | INFO     | [payload] failed_post thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,253 | INFO     | [data] copytool_out thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,276 | INFO     | [data] control thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,285 | INFO     | [job] validate thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 01:43:15] 2026-05-01 05:36:08,332 | INFO     | [data] copytool_in thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:08,541 | INFO     | [payload] control thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:12,321 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 01:43:15] 2026-05-01 05:36:51,788 | INFO     | [monitor] cgroup control has ended
[2026-05-01 01:43:15] 2026-05-01 05:36:52,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261454567232)>', '<ExcThread(monitor, started 140261107672832)>']
[2026-05-01 01:43:15] 2026-05-01 05:36:53,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 01:43:15] 2026-05-01 05:36:53,543 | INFO     | [monitor] control thread has ended
[2026-05-01 01:43:15] 2026-05-01 05:36:57,785 | INFO     | all workflow threads have been joined
[2026-05-01 01:43:15] 2026-05-01 05:36:57,785 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 01:43:15] 2026-05-01 05:36:57,786 | INFO     | traces error code: 0
[2026-05-01 01:43:15] 2026-05-01 05:36:57,786 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 01:43:15] 2026-05-01 05:36:59,801 [wrapper] ==== pilot stdout END ====
[2026-05-01 01:43:15] 2026-05-01 05:36:59,853 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 01:43:15] 2026-05-01 05:36:59,926 [wrapper] pilotpid: 2473735
[2026-05-01 01:43:15] 2026-05-01 05:36:59,943 [wrapper] Pilot exit status: 0
[2026-05-01 01:43:15] 2026-05-01 05:37:00,085 [wrapper] pandaids: 7123090159
[2026-05-01 01:43:15] 2026-05-01 05:37:00,343 [wrapper] cleanup supervisor_pilot 3248190 2473736
[2026-05-01 01:43:15] 2026-05-01 05:37:00,362 [wrapper] Test setup, not cleaning
[2026-05-01 01:43:15] 2026-05-01 05:37:00,380 [wrapper] apfmon messages muted
[2026-05-01 01:43:15] 2026-05-01 05:37:00,383 [wrapper] ==== wrapper stdout END ====
[2026-05-01 01:43:15] 2026-05-01 05:37:00,389 [wrapper] ==== wrapper stderr END ====
[2026-05-01 01:43:15]  *** Error codes and diagnostics ***
[2026-05-01 01:43:15]     "exeErrorCode": 0,
[2026-05-01 01:43:15]     "pilotErrorCode": 0,
[2026-05-01 01:43:15]  *** Listing of results directory ***
[2026-05-01 01:43:15] total 492296
[2026-05-01 01:43:15] -rwx------. 1 boincer umatlas     36322 Apr 30 19:29 runpilot2-wrapper.sh
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 19:29 queuedata.json
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 19:29 pilot3.tar.gz
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas       100 Apr 30 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 01:43:15] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 21:47 run_atlas
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas       105 Apr 30 21:47 job.xml
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas 288127214 Apr 30 21:47 EVNT.48752839._000004.pool.root.1
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 21:47 start_atlas.sh
[2026-05-01 01:43:15] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 21:47 shared
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas    697392 Apr 30 21:47 input.tar.gz
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas         0 Apr 30 21:47 boinc_lockfile
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      2552 Apr 30 21:47 pandaJob.out
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas        57 Apr 30 21:48 setup.sh.local
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas   1001806 Apr 30 21:48 agis_schedconf.cvmfs.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas       443 Apr 30 21:48 workernode_map.json
[2026-05-01 01:43:15] drwx------. 5 boincer umatlas      4096 Apr 30 21:48 pilot3
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas 208740463 May  1 01:34 HITS.49860732._000142.pool.root.1
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas       487 May  1 01:34 boinc_task_state.xml
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas        95 May  1 01:35 pilot_heartbeat.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas      1044 May  1 01:35 memory_monitor_summary.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas   1510091 May  1 01:35 agis_ddmendpoints.agis.ALL.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas    396613 May  1 01:35 log.49860732._000142.job.log.tgz.1
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas      6406 May  1 01:35 heartbeat_new.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas      6297 May  1 01:35 heartbeat.json
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas      4551 May  1 01:36 pilotlog.txt
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas   1164055 May  1 01:37 log.49860732._000142.job.log.1
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas       357 May  1 01:37 output.list
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas       410 May  1 01:37 runtime_log
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas   1576960 May  1 01:37 result.tar.gz
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      8970 May  1 01:37 runtime_log.err
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas       657 May  1 01:37 e5bbb29a4bcf.diag
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      6769 May  1 01:37 init_data.xml
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas        27 May  1 01:43 wrapper_checkpoint.txt
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      8192 May  1 01:43 boinc_mmap_file
[2026-05-01 01:43:15] -rw-r--r--. 1 boincer umatlas      2138 May  1 01:43 stderr.txt
[2026-05-01 01:43:15] HITS file was successfully produced:
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas 208740463 May  1 01:34 shared/HITS.pool.root.1
[2026-05-01 01:43:15]  *** Contents of shared directory: ***
[2026-05-01 01:43:15] total 487476
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas 288127214 Apr 30 21:47 ATLAS.root_0
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 21:47 start_atlas.sh
[2026-05-01 01:43:15] -rw-r--r--. 2 boincer umatlas    697392 Apr 30 21:47 input.tar.gz
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas 208740463 May  1 01:34 HITS.pool.root.1
[2026-05-01 01:43:15] -rw-------. 1 boincer umatlas   1576960 May  1 01:37 result.tar.gz
01:43:17 (2469057): run_atlas exited; CPU time 45726.709395
01:43:17 (2469057): called boinc_finish(0)

</stderr_txt>
]]>

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