Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:42 (29321): wrapper (7.7.26015): starting
11:02:42 (29321): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 11:02:42] Arguments: --nthreads 8
[2026-05-01 11:02:42] Threads: 8
[2026-05-01 11:02:42] Checking for CVMFS
[2026-05-01 11:02:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 11:02:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 11:02:45] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 11:02:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 11:02:47] 2.11.2.0 13298 22565 104740 159084 1 253 23082931 25165825 2621 130560 0 10127488 99.897 6800218 5922 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 11:02:47] CVMFS is ok
[2026-05-01 11:02:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 11:02:47] Checking for apptainer binary...
[2026-05-01 11:02:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 11:02:47] Running /usr/bin/apptainer --version
[2026-05-01 11:02:47] apptainer version 1.3.2-1.el7
[2026-05-01 11:02:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 11:02:56] cg-vwn457.simple-grid.lan
[2026-05-01 11:02:56] apptainer works
[2026-05-01 11:02:56] Set ATHENA_PROC_NUMBER=8
[2026-05-01 11:02:56] Set ATHENA_CORE_NUMBER=8
[2026-05-01 11:02:56] Starting ATLAS job with PandaID=7119462643
[2026-05-01 11:02:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 15:22:02]  *** The last 200 lines of the pilot log: ***
[2026-05-01 15:22:02] 2026-05-01 13:20:51,370 | INFO     | this job has now completed (state=finished)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,370 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,370 | INFO     | log transfer has been attempted: DONE
[2026-05-01 15:22:02] 2026-05-01 13:20:51,370 | INFO     | job 7119462643 has finished - writing final server update
[2026-05-01 15:22:02] 2026-05-01 13:20:51,371 | INFO     | total number of processed events: 400 (read)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,373 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-7119462643/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,373 | INFO     | extracted standard info from prmon json
[2026-05-01 15:22:02] 2026-05-01 13:20:51,374 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 15:22:02] 2026-05-01 13:20:51,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 15:22:02] 2026-05-01 13:20:51,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 15:22:02] 2026-05-01 13:20:51,379 | INFO     | fitting pss+swap vs Time
[2026-05-01 15:22:02] 2026-05-01 13:20:51,380 | INFO     | sum of square deviations: 4560065859.983699
[2026-05-01 15:22:02] 2026-05-01 13:20:51,382 | INFO     | sum of deviations: 78380041641.77953
[2026-05-01 15:22:02] 2026-05-01 13:20:51,382 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,382 | INFO     | mean y: 2455627.1102040815
[2026-05-01 15:22:02] 2026-05-01 13:20:51,383 | INFO     | intersect: 2455627.1102040815
[2026-05-01 15:22:02] 2026-05-01 13:20:51,383 | INFO     | chi2: 2.861312320647553
[2026-05-01 15:22:02] 2026-05-01 13:20:51,384 | INFO     | sum of square deviations: 4286535759.9833198
[2026-05-01 15:22:02] 2026-05-01 13:20:51,386 | INFO     | sum of deviations: 76593767427.3417
[2026-05-01 15:22:02] 2026-05-01 13:20:51,386 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,386 | INFO     | mean y: 2454631.0791666666
[2026-05-01 15:22:02] 2026-05-01 13:20:51,386 | INFO     | intersect: 2454631.0791666666
[2026-05-01 15:22:02] 2026-05-01 13:20:51,387 | INFO     | chi2: 2.862827135850119
[2026-05-01 15:22:02] 2026-05-01 13:20:51,387 | INFO     | current chi2=2.862827135850119 (change=-0.05294127424102066 %)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,387 | INFO     | right removable region: 239
[2026-05-01 15:22:02] 2026-05-01 13:20:51,388 | INFO     | sum of square deviations: 4286534539.9833198
[2026-05-01 15:22:02] 2026-05-01 13:20:51,390 | INFO     | sum of deviations: 17503532930.09166
[2026-05-01 15:22:02] 2026-05-01 13:20:51,390 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,390 | INFO     | mean y: 2489395.2041666666
[2026-05-01 15:22:02] 2026-05-01 13:20:51,390 | INFO     | intersect: 2489395.2041666666
[2026-05-01 15:22:02] 2026-05-01 13:20:51,391 | INFO     | chi2: 0.09981939878425672
[2026-05-01 15:22:02] 2026-05-01 13:20:51,391 | INFO     | current chi2=0.09981939878425672 (change=96.51141198169984 %)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,392 | INFO     | sum of square deviations: 4024166219.9829893
[2026-05-01 15:22:02] 2026-05-01 13:20:51,394 | INFO     | sum of deviations: 6298910268.27234
[2026-05-01 15:22:02] 2026-05-01 13:20:51,394 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,394 | INFO     | mean y: 2495867.8638297874
[2026-05-01 15:22:02] 2026-05-01 13:20:51,394 | INFO     | intersect: 2495867.8638297874
[2026-05-01 15:22:02] 2026-05-01 13:20:51,395 | INFO     | chi2: 0.0047095076876921
[2026-05-01 15:22:02] 2026-05-01 13:20:51,395 | INFO     | current chi2=0.0047095076876921 (change=95.2819714954696 %)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,395 | INFO     | sum of square deviations: 3772728337.4826145
[2026-05-01 15:22:02] 2026-05-01 13:20:51,401 | INFO     | sum of deviations: 6559548433.647826
[2026-05-01 15:22:02] 2026-05-01 13:20:51,402 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,402 | INFO     | mean y: 2495705.9260869566
[2026-05-01 15:22:02] 2026-05-01 13:20:51,402 | INFO     | intersect: 2495705.9260869566
[2026-05-01 15:22:02] 2026-05-01 13:20:51,402 | INFO     | chi2: 0.004239954387285098
[2026-05-01 15:22:02] 2026-05-01 13:20:51,403 | INFO     | current chi2=0.004239954387285098 (change=9.970326657160793 %)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,403 | INFO     | left removable region: 15
[2026-05-01 15:22:02] 2026-05-01 13:20:51,403 | INFO     | sum of square deviations: 3485105071.982137
[2026-05-01 15:22:02] 2026-05-01 13:20:51,405 | INFO     | sum of deviations: 6237530514.419643
[2026-05-01 15:22:02] 2026-05-01 13:20:51,405 | INFO     | mean x (centered): 0.0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,405 | INFO     | mean y: 2495501.0401785714
[2026-05-01 15:22:02] 2026-05-01 13:20:51,406 | INFO     | intersect: 2495501.0401785714
[2026-05-01 15:22:02] 2026-05-01 13:20:51,406 | INFO     | chi2: 0.004221365881009165
[2026-05-01 15:22:02] 2026-05-01 13:20:51,406 | INFO     | current memory leak: 1.79 B/s (using 224 data points, chi2=0.00)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,407 | INFO     | could have reported an average CPU frequency of 2250 MHz (12 samples)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,407 | INFO     | ..............................
[2026-05-01 15:22:02] 2026-05-01 13:20:51,407 | INFO     | . Timing measurements:
[2026-05-01 15:22:02] 2026-05-01 13:20:51,407 | INFO     | . get job = 0 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,407 | INFO     | . initial setup = 107 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | . payload setup = 126 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | . stage-in = 1 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | . payload execution = 15057 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | . stage-out = 8 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | . log creation = 0 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,408 | INFO     | ..............................
[2026-05-01 15:22:02] 2026-05-01 13:20:51,526 | INFO     | 
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | job summary report
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | --------------------------------------------------
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | PanDA job id: 7119462643
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | task id: 49263191
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | errors: (none)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | pilot state: finished 
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | transexitcode: 0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | exeerrorcode: 0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,527 | INFO     | exeerrordiag: 
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | exitcode: 0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | exitmsg: OK
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | cpuconsumptiontime: 55422 s
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | nevents: 400
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | neventsw: 0
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | pid: 12234
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | pgrp: 12234
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | corecount: 8
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | event service: False
[2026-05-01 15:22:02] 2026-05-01 13:20:51,528 | INFO     | sizes: {0: 2275925, 1: 2276611, 2: 2278440, 13: 2278440, 15187: 2309518, 15196: 2319114}
[2026-05-01 15:22:02] 2026-05-01 13:20:51,529 | INFO     | --------------------------------------------------
[2026-05-01 15:22:02] 2026-05-01 13:20:51,529 | INFO     | 
[2026-05-01 15:22:02] 2026-05-01 13:20:51,529 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-05-01 15:22:02] 2026-05-01 13:20:51,552 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,554 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,555 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,555 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 15:22:02] 2026-05-01 13:20:51,555 | INFO     | job 7119462643 has completed (purged errors)
[2026-05-01 15:22:02] 2026-05-01 13:20:51,555 | INFO     | overall cleanup function is called
[2026-05-01 15:22:02] 2026-05-01 13:20:52,563 | INFO     | --- collectZombieJob: --- 10, [12234]
[2026-05-01 15:22:02] 2026-05-01 13:20:52,563 | INFO     | zombie collector waiting for pid 12234
[2026-05-01 15:22:02] 2026-05-01 13:20:52,563 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 15:22:02] 2026-05-01 13:20:52,563 | INFO     | collected zombie processes
[2026-05-01 15:22:02] 2026-05-01 13:20:52,563 | INFO     | will attempt to kill all subprocesses of pid=12234
[2026-05-01 15:22:02] 2026-05-01 13:20:52,660 | INFO     | process IDs to be killed: [12234] (in reverse order)
[2026-05-01 15:22:02] 2026-05-01 13:20:52,739 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 15:22:02] 2026-05-01 13:20:52,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 15:22:02] 2026-05-01 13:20:52,743 | INFO     | did not find any defunct processes belonging to 12234
[2026-05-01 15:22:02] 2026-05-01 13:20:52,746 | INFO     | did not find any defunct processes belonging to 12234
[2026-05-01 15:22:02] 2026-05-01 13:20:52,746 | INFO     | Ready for new job
[2026-05-01 15:22:02] 2026-05-01 13:20:52,748 | INFO     | ***************************************
[2026-05-01 15:22:02] 2026-05-01 13:20:52,748 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 15:22:02] 2026-05-01 13:20:52,748 | INFO     | ***************************************
[2026-05-01 15:22:02] 2026-05-01 13:20:52,749 | INFO     | 
[2026-05-01 15:22:02] 2026-05-01 13:20:52,749 | INFO     | pilot is running in a VM
[2026-05-01 15:22:02] 2026-05-01 13:20:52,749 | INFO     | architecture information:
[2026-05-01 15:22:02] 2026-05-01 13:20:52,750 | INFO     | executing command: cat /etc/os-release
[2026-05-01 15:22:02] 2026-05-01 13:20:53,063 | INFO     | cat /etc/os-release:
[2026-05-01 15:22:02] NAME="CentOS Linux"
[2026-05-01 15:22:02] VERSION="7 (Core)"
[2026-05-01 15:22:02] ID="centos"
[2026-05-01 15:22:02] ID_LIKE="rhel fedora"
[2026-05-01 15:22:02] VERSION_ID="7"
[2026-05-01 15:22:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 15:22:02] ANSI_COLOR="0;31"
[2026-05-01 15:22:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 15:22:02] HOME_URL="https://www.centos.org/"
[2026-05-01 15:22:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 15:22:02] 
[2026-05-01 15:22:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 15:22:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 15:22:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 15:22:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 15:22:02] 
[2026-05-01 15:22:02] 2026-05-01 13:20:53,064 | INFO     | ***************************************
[2026-05-01 15:22:02] 2026-05-01 13:20:53,567 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-05-01 15:22:02] 2026-05-01 13:20:54,208 | INFO     | sufficient remaining disk space (482745516032 B)
[2026-05-01 15:22:02] 2026-05-01 13:20:54,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 15:22:02] 2026-05-01 13:20:54,209 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 15:22:02] 2026-05-01 13:20:54,209 | INFO     | update_server=False
[2026-05-01 15:22:02] 2026-05-01 13:20:54,209 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 15:22:02] 2026-05-01 13:20:54,210 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 15:22:02] 2026-05-01 13:20:54,389 | INFO     | all job control threads have been joined
[2026-05-01 15:22:02] 2026-05-01 13:20:54,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:22:02] 2026-05-01 13:20:54,393 | INFO     | aborting loop
[2026-05-01 15:22:02] 2026-05-01 13:20:54,529 | INFO     | all payload control threads have been joined
[2026-05-01 15:22:02] 2026-05-01 13:20:54,872 | INFO     | all data control threads have been joined
[2026-05-01 15:22:02] 2026-05-01 13:20:55,215 | INFO     | [job] retrieve thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,395 | INFO     | [job] control thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,478 | INFO     | [job] job monitor thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,502 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,539 | INFO     | [payload] control thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,878 | INFO     | [data] control thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,889 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:55,899 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,198 | INFO     | [payload] validate_post thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,217 | INFO     | [data] copytool_out thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,269 | INFO     | [payload] failed_post thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,490 | INFO     | [data] copytool_in thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,490 | INFO     | [job] validate thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,518 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:20:56,541 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:22:02] 2026-05-01 13:20:57,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 15:22:02] 2026-05-01 13:20:57,547 | INFO     | [job] queue monitor thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:21:01,215 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 15:22:02] 2026-05-01 13:21:24,421 | INFO     | PID=1008 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-01 15:22:02] 2026-05-01 13:21:24,421 | INFO     | .. there are 9 such processes running
[2026-05-01 15:22:02] 2026-05-01 13:21:24,426 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 15:22:02] 2026-05-01 13:21:24,426 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 15:22:02] 2026-05-01 13:21:24,426 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 15:22:02] 2026-05-01 13:21:48,987 | INFO     | [monitor] cgroup control has ended
[2026-05-01 15:22:02] 2026-05-01 13:21:51,579 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516395583296)>', '<ExcThread(monitor, started 140515894884096)>']
[2026-05-01 15:22:02] 2026-05-01 13:21:51,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 15:22:02] 2026-05-01 13:21:51,907 | INFO     | [monitor] control thread has ended
[2026-05-01 15:22:02] 2026-05-01 13:21:56,604 | INFO     | all workflow threads have been joined
[2026-05-01 15:22:02] 2026-05-01 13:21:56,604 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 15:22:02] 2026-05-01 13:21:56,605 | INFO     | traces error code: 0
[2026-05-01 15:22:02] 2026-05-01 13:21:56,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 15:22:02] 2026-05-01 13:21:56,750 [wrapper] ==== pilot stdout END ====
[2026-05-01 15:22:02] 2026-05-01 13:21:56,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 15:22:02] 2026-05-01 13:21:57,153 [wrapper] pilotpid: 1008
[2026-05-01 15:22:02] 2026-05-01 13:21:57,231 [wrapper] Pilot exit status: 0
[2026-05-01 15:22:02] 2026-05-01 13:21:57,861 [wrapper] pandaids: 7119462643
[2026-05-01 15:22:02] 2026-05-01 13:21:58,548 [wrapper] cleanup supervisor_pilot 31795 1009
[2026-05-01 15:22:02] 2026-05-01 13:21:58,567 [wrapper] Test setup, not cleaning
[2026-05-01 15:22:02] 2026-05-01 13:21:58,642 [wrapper] apfmon messages muted
[2026-05-01 15:22:02] 2026-05-01 13:21:58,727 [wrapper] ==== wrapper stdout END ====
[2026-05-01 15:22:02] 2026-05-01 13:21:58,759 [wrapper] ==== wrapper stderr END ====
[2026-05-01 15:22:02]  *** Error codes and diagnostics ***
[2026-05-01 15:22:02]     "exeErrorCode": 0,
[2026-05-01 15:22:02]     "pilotErrorCode": 0,
[2026-05-01 15:22:02]  *** Listing of results directory ***
[2026-05-01 15:22:02] total 418148
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc    683926 Apr 30 22:35 pilot3.tar.gz
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc      5631 Apr 30 22:38 queuedata.json
[2026-05-01 15:22:02] -rwx------. 1 boinc boinc     36322 Apr 30 22:38 runpilot2-wrapper.sh
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc       100 May  1 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 15:22:02] -rwxr-xr-x. 1 boinc boinc      7986 May  1 11:02 run_atlas
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc       105 May  1 11:02 job.xml
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc 225719394 May  1 11:02 EVNT.49263189._001482.pool.root.1
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc      6307 May  1 11:02 init_data.xml
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc     15667 May  1 11:02 start_atlas.sh
[2026-05-01 15:22:02] drwxrwx--x. 2 boinc boinc        68 May  1 11:02 shared
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc    697426 May  1 11:02 input.tar.gz
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc         0 May  1 11:02 boinc_lockfile
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc      2576 May  1 11:02 pandaJob.out
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc       413 May  1 11:07 workernode_map.json
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc   1002922 May  1 11:07 agis_schedconf.cvmfs.json
[2026-05-01 15:22:02] drwx------. 5 boinc boinc      4096 May  1 11:07 pilot3
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc 194724406 May  1 15:19 HITS.49263191._082483.pool.root.1
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc       488 May  1 15:20 boinc_task_state.xml
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc      1017 May  1 15:20 memory_monitor_summary.json
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc   1508687 May  1 15:20 agis_ddmendpoints.agis.ALL.json
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc    410421 May  1 15:20 log.49263191._082483.job.log.tgz.1
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc      6341 May  1 15:20 heartbeat_new.json
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc      6232 May  1 15:20 heartbeat.json
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc        95 May  1 15:21 pilot_heartbeat.json
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc      8192 May  1 15:21 boinc_mmap_file
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc        28 May  1 15:21 wrapper_checkpoint.txt
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc      4883 May  1 15:21 pilotlog.txt
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc   1399616 May  1 15:21 log.49263191._082483.job.log.1
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc       357 May  1 15:22 output.list
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc       410 May  1 15:22 runtime_log
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc   1822720 May  1 15:22 result.tar.gz
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc      8455 May  1 15:22 runtime_log.err
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc       656 May  1 15:22 bde067b5ffd6.diag
[2026-05-01 15:22:02] -rw-r--r--. 1 boinc boinc     20663 May  1 15:22 stderr.txt
[2026-05-01 15:22:02] HITS file was successfully produced:
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc 194724406 May  1 15:19 shared/HITS.pool.root.1
[2026-05-01 15:22:02]  *** Contents of shared directory: ***
[2026-05-01 15:22:02] total 413076
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc 225719394 May  1 11:02 ATLAS.root_0
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc     15667 May  1 11:02 start_atlas.sh
[2026-05-01 15:22:02] -rw-r--r--. 2 boinc boinc    697426 May  1 11:02 input.tar.gz
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc 194724406 May  1 15:19 HITS.pool.root.1
[2026-05-01 15:22:02] -rw-------. 1 boinc boinc   1822720 May  1 15:22 result.tar.gz
15:22:04 (29321): run_atlas exited; CPU time 55624.503515
15:22:04 (29321): called boinc_finish(0)

</stderr_txt>
]]>

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