Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:31:14 (988059): wrapper (7.7.26015): starting
21:31:14 (988059): wrapper: running run_atlas (--nthreads 9)
[2026-04-30 21:31:14] Arguments: --nthreads 9
[2026-04-30 21:31:14] Threads: 9
[2026-04-30 21:31:14] Checking for CVMFS
[2026-04-30 21:31:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 21:31:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 21:31:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 21:31:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 21:31:14] 2.13.3.0 9361 623 78484 159072 3 115 24372703 39288832 9202 16776704 0 180426 98.614 989182 39139 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-30 21:31:14] CVMFS is ok
[2026-04-30 21:31:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 21:31:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 21:31:14] Further information can be found at the LHC@home message board.
[2026-04-30 21:31:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 21:31:14] Checking for apptainer binary...
[2026-04-30 21:31:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 21:31:14] Running /usr/bin/apptainer --version
[2026-04-30 21:31:14] apptainer version 1.4.5-3.el9
[2026-04-30 21:31:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 21:31:14] c-211-31.aglt2.org
[2026-04-30 21:31:14] apptainer works
[2026-04-30 21:31:15] Set ATHENA_PROC_NUMBER=9
[2026-04-30 21:31:15] Set ATHENA_CORE_NUMBER=9
[2026-04-30 21:31:15] Starting ATLAS job with PandaID=7122982974
[2026-04-30 21:31:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 16:23:32]  *** The last 200 lines of the pilot log: ***
[2026-05-01 16:23:32] 2026-05-01 20:22:40,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 16:23:32] 2026-05-01 20:22:41,757 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 16:23:32] 2026-05-01 20:22:42,949 | INFO     | monitor loop #4032: job 0:7122982974 is in state 'finished'
[2026-05-01 16:23:32] 2026-05-01 20:22:42,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,030 | INFO     | job 7122982974 has state=finished
[2026-05-01 16:23:32] 2026-05-01 20:22:43,031 | INFO     | preparing for final server update for job 7122982974 in state='finished'
[2026-05-01 16:23:32] 2026-05-01 20:22:43,031 | INFO     | reading metadata from: /tmp/boinchome/slots/2/PanDA_Pilot-7122982974/jobReport.json
[2026-05-01 16:23:32] 2026-05-01 20:22:43,083 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/2/workernode_map.json
[2026-05-01 16:23:32] 2026-05-01 20:22:43,084 | INFO     | this job has now completed (state=finished)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,084 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,084 | INFO     | log transfer has been attempted: DONE
[2026-05-01 16:23:32] 2026-05-01 20:22:43,084 | INFO     | job 7122982974 has finished - writing final server update
[2026-05-01 16:23:32] 2026-05-01 20:22:43,085 | INFO     | total number of processed events: 400 (read)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,123 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-7122982974/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,137 | INFO     | extracted standard info from prmon json
[2026-05-01 16:23:32] 2026-05-01 20:22:43,137 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 16:23:32] 2026-05-01 20:22:43,137 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 16:23:32] 2026-05-01 20:22:43,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 16:23:32] 2026-05-01 20:22:43,158 | INFO     | fitting pss+swap vs Time
[2026-05-01 16:23:32] 2026-05-01 20:22:43,160 | INFO     | sum of square deviations: 425227659563.08527
[2026-05-01 16:23:32] 2026-05-01 20:22:43,194 | INFO     | sum of deviations: 355204328031.53265
[2026-05-01 16:23:32] 2026-05-01 20:22:43,194 | INFO     | mean x (centered): 0.0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,194 | INFO     | mean y: 2578337.0090009
[2026-05-01 16:23:32] 2026-05-01 20:22:43,195 | INFO     | intersect: 2578337.0090009
[2026-05-01 16:23:32] 2026-05-01 20:22:43,196 | INFO     | chi2: 2.1484051757304434
[2026-05-01 16:23:32] 2026-05-01 20:22:43,198 | INFO     | sum of square deviations: 419512713058.98126
[2026-05-01 16:23:32] 2026-05-01 20:22:43,234 | INFO     | sum of deviations: 349544193127.33484
[2026-05-01 16:23:32] 2026-05-01 20:22:43,234 | INFO     | mean x (centered): 0.0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,234 | INFO     | mean y: 2578185.959312839
[2026-05-01 16:23:32] 2026-05-01 20:22:43,235 | INFO     | intersect: 2578185.959312839
[2026-05-01 16:23:32] 2026-05-01 20:22:43,236 | INFO     | chi2: 2.1483028677022284
[2026-05-01 16:23:32] 2026-05-01 20:22:43,237 | INFO     | current chi2=2.1483028677022284 (change=0.004762045324164576 %)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,237 | INFO     | right removable region: 1105
[2026-05-01 16:23:32] 2026-05-01 20:22:43,239 | INFO     | sum of square deviations: 419511935918.9808
[2026-05-01 16:23:32] 2026-05-01 20:22:43,277 | INFO     | sum of deviations: 126959897178.18341
[2026-05-01 16:23:32] 2026-05-01 20:22:43,278 | INFO     | mean x (centered): 0.0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,278 | INFO     | mean y: 2584417.603074141
[2026-05-01 16:23:32] 2026-05-01 20:22:43,278 | INFO     | intersect: 2584417.603074141
[2026-05-01 16:23:32] 2026-05-01 20:22:43,280 | INFO     | chi2: 0.249394105500575
[2026-05-01 16:23:32] 2026-05-01 20:22:43,280 | INFO     | current chi2=0.249394105500575 (change=88.3916633455427 %)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,281 | INFO     | sum of square deviations: 413847655099.81696
[2026-05-01 16:23:32] 2026-05-01 20:22:43,316 | INFO     | sum of deviations: 118228190564.38608
[2026-05-01 16:23:32] 2026-05-01 20:22:43,317 | INFO     | mean x (centered): 0.0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,317 | INFO     | mean y: 2584652.0208901
[2026-05-01 16:23:32] 2026-05-01 20:22:43,317 | INFO     | intersect: 2584652.0208901
[2026-05-01 16:23:32] 2026-05-01 20:22:43,319 | INFO     | chi2: 0.24289363365214586
[2026-05-01 16:23:32] 2026-05-01 20:22:43,319 | INFO     | current chi2=0.24289363365214586 (change=2.6065058095024436 %)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,319 | INFO     | left removable region: 10
[2026-05-01 16:23:32] 2026-05-01 20:22:43,320 | INFO     | sum of square deviations: 407119027765.73975
[2026-05-01 16:23:32] 2026-05-01 20:22:43,352 | INFO     | sum of deviations: 112736423259.9168
[2026-05-01 16:23:32] 2026-05-01 20:22:43,352 | INFO     | mean x (centered): 0.0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,353 | INFO     | mean y: 2584502.6429223744
[2026-05-01 16:23:32] 2026-05-01 20:22:43,353 | INFO     | intersect: 2584502.6429223744
[2026-05-01 16:23:32] 2026-05-01 20:22:43,354 | INFO     | chi2: 0.24256980556500365
[2026-05-01 16:23:32] 2026-05-01 20:22:43,355 | INFO     | current memory leak: 0.28 B/s (using 1095 data points, chi2=0.24)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,356 | INFO     | could have reported an average CPU frequency of 2899 MHz (41 samples)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,356 | INFO     | ..............................
[2026-05-01 16:23:32] 2026-05-01 20:22:43,356 | INFO     | . Timing measurements:
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . get job = 0 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . initial setup = 21 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . payload setup = 53 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . stage-in = 0 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . payload execution = 67757 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . stage-out = 2 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,357 | INFO     | . log creation = 0 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,358 | INFO     | ..............................
[2026-05-01 16:23:32] 2026-05-01 20:22:43,683 | INFO     | 
[2026-05-01 16:23:32] 2026-05-01 20:22:43,683 | INFO     | job summary report
[2026-05-01 16:23:32] 2026-05-01 20:22:43,686 | INFO     | --------------------------------------------------
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | PanDA job id: 7122982974
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | task id: 50017163
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | errors: (none)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | pilot state: finished 
[2026-05-01 16:23:32] 2026-05-01 20:22:43,687 | INFO     | transexitcode: 0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | exeerrorcode: 0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | exeerrordiag: 
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | exitcode: 0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | exitmsg: OK
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | cpuconsumptiontime: 106998 s
[2026-05-01 16:23:32] 2026-05-01 20:22:43,688 | INFO     | nevents: 400
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | neventsw: 0
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | pid: 998414
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | pgrp: 998414
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | corecount: 9
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | event service: False
[2026-05-01 16:23:32] 2026-05-01 20:22:43,689 | INFO     | sizes: {0: 2276407, 1: 2276548, 2: 2276548, 3: 2278292, 13: 2278320, 67815: 2333818, 67818: 2343090, 67821: 2343146, 67823: 2343436}
[2026-05-01 16:23:32] 2026-05-01 20:22:43,690 | INFO     | --------------------------------------------------
[2026-05-01 16:23:32] 2026-05-01 20:22:43,690 | INFO     | 
[2026-05-01 16:23:32] 2026-05-01 20:22:43,690 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-05-01 16:23:32] 2026-05-01 20:22:43,758 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,758 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,759 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,759 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,762 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,762 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 16:23:32] 2026-05-01 20:22:43,762 | INFO     | job 7122982974 has completed (purged errors)
[2026-05-01 16:23:32] 2026-05-01 20:22:43,763 | INFO     | overall cleanup function is called
[2026-05-01 16:23:32] 2026-05-01 20:22:44,774 | INFO     | --- collectZombieJob: --- 10, [998414]
[2026-05-01 16:23:32] 2026-05-01 20:22:44,774 | INFO     | zombie collector waiting for pid 998414
[2026-05-01 16:23:32] 2026-05-01 20:22:44,775 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 16:23:32] 2026-05-01 20:22:44,775 | INFO     | collected zombie processes
[2026-05-01 16:23:32] 2026-05-01 20:22:44,775 | INFO     | will attempt to kill all subprocesses of pid=998414
[2026-05-01 16:23:32] 2026-05-01 20:22:45,233 | INFO     | process IDs to be killed: [998414] (in reverse order)
[2026-05-01 16:23:32] 2026-05-01 20:22:45,364 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 16:23:32] 2026-05-01 20:22:45,365 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 16:23:32] 2026-05-01 20:22:45,428 | INFO     | did not find any defunct processes belonging to 998414
[2026-05-01 16:23:32] 2026-05-01 20:22:45,460 | INFO     | did not find any defunct processes belonging to 998414
[2026-05-01 16:23:32] 2026-05-01 20:22:45,460 | INFO     | Ready for new job
[2026-05-01 16:23:32] 2026-05-01 20:22:45,464 | INFO     | ***************************************
[2026-05-01 16:23:32] 2026-05-01 20:22:45,465 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 16:23:32] 2026-05-01 20:22:45,465 | INFO     | ***************************************
[2026-05-01 16:23:32] 2026-05-01 20:22:45,465 | INFO     | 
[2026-05-01 16:23:32] 2026-05-01 20:22:45,467 | INFO     | architecture information:
[2026-05-01 16:23:32] 2026-05-01 20:22:45,471 | INFO     | executing command: cat /etc/os-release
[2026-05-01 16:23:32] 2026-05-01 20:22:45,499 | INFO     | cat /etc/os-release:
[2026-05-01 16:23:32] NAME="CentOS Linux"
[2026-05-01 16:23:32] VERSION="7 (Core)"
[2026-05-01 16:23:32] ID="centos"
[2026-05-01 16:23:32] ID_LIKE="rhel fedora"
[2026-05-01 16:23:32] VERSION_ID="7"
[2026-05-01 16:23:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 16:23:32] ANSI_COLOR="0;31"
[2026-05-01 16:23:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 16:23:32] HOME_URL="https://www.centos.org/"
[2026-05-01 16:23:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 16:23:32] 
[2026-05-01 16:23:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 16:23:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 16:23:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 16:23:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 16:23:32] 
[2026-05-01 16:23:32] 2026-05-01 20:22:45,499 | INFO     | ***************************************
[2026-05-01 16:23:32] 2026-05-01 20:22:46,003 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-05-01 16:23:32] 2026-05-01 20:22:46,023 | INFO     | sufficient remaining disk space (51551141888 B)
[2026-05-01 16:23:32] 2026-05-01 20:22:46,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 16:23:32] 2026-05-01 20:22:46,024 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 16:23:32] 2026-05-01 20:22:46,024 | INFO     | update_server=False
[2026-05-01 16:23:32] 2026-05-01 20:22:46,024 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 16:23:32] 2026-05-01 20:22:46,366 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 16:23:32] 2026-05-01 20:22:46,468 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 16:23:32] 2026-05-01 20:22:46,468 | INFO     | aborting loop
[2026-05-01 16:23:32] 2026-05-01 20:22:46,513 | INFO     | all payload control threads have been joined
[2026-05-01 16:23:32] 2026-05-01 20:22:47,030 | INFO     | [job] retrieve thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,108 | INFO     | all data control threads have been joined
[2026-05-01 16:23:32] 2026-05-01 20:22:47,194 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,373 | INFO     | all job control threads have been joined
[2026-05-01 16:23:32] 2026-05-01 20:22:47,474 | INFO     | [job] job monitor thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,486 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,519 | INFO     | [payload] control thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,733 | INFO     | [data] copytool_in thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,897 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:47,928 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 16:23:32] 2026-05-01 20:22:48,028 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,114 | INFO     | [data] control thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,182 | INFO     | [payload] validate_post thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,372 | INFO     | [data] copytool_out thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,379 | INFO     | [job] control thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,436 | INFO     | [job] validate thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:48,527 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 16:23:32] 2026-05-01 20:22:48,571 | INFO     | [payload] failed_post thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:49,533 | INFO     | [job] queue monitor thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:22:51,942 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 16:23:32] 2026-05-01 20:23:16,676 | INFO     | PID=991743 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 16:23:32] 2026-05-01 20:23:16,676 | INFO     | .. there are 9 such processes running
[2026-05-01 16:23:32] 2026-05-01 20:23:16,678 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 16:23:32] 2026-05-01 20:23:16,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 16:23:32] 2026-05-01 20:23:16,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 16:23:32] 2026-05-01 20:23:25,131 | INFO     | [monitor] cgroup control has ended
[2026-05-01 16:23:32] 2026-05-01 20:23:26,983 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139850950940480)>', '<ExcThread(monitor, started 139850594359040)>']
[2026-05-01 16:23:32] 2026-05-01 20:23:27,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 16:23:32] 2026-05-01 20:23:27,741 | INFO     | [monitor] control thread has ended
[2026-05-01 16:23:32] 2026-05-01 20:23:32,009 | INFO     | all workflow threads have been joined
[2026-05-01 16:23:32] 2026-05-01 20:23:32,009 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 16:23:32] 2026-05-01 20:23:32,010 | INFO     | traces error code: 0
[2026-05-01 16:23:32] 2026-05-01 20:23:32,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 16:23:32] 2026-05-01 20:23:32,392 [wrapper] ==== pilot stdout END ====
[2026-05-01 16:23:32] 2026-05-01 20:23:32,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 16:23:32] 2026-05-01 20:23:32,399 [wrapper] pilotpid: 991743
[2026-05-01 16:23:32] 2026-05-01 20:23:32,402 [wrapper] Pilot exit status: 0
[2026-05-01 16:23:32] 2026-05-01 20:23:32,427 [wrapper] pandaids: 7122982974
[2026-05-01 16:23:32] 2026-05-01 20:23:32,514 [wrapper] cleanup supervisor_pilot 2657178 991744
[2026-05-01 16:23:32] 2026-05-01 20:23:32,526 [wrapper] Test setup, not cleaning
[2026-05-01 16:23:32] 2026-05-01 20:23:32,529 [wrapper] apfmon messages muted
[2026-05-01 16:23:32] 2026-05-01 20:23:32,532 [wrapper] ==== wrapper stdout END ====
[2026-05-01 16:23:32] 2026-05-01 20:23:32,534 [wrapper] ==== wrapper stderr END ====
[2026-05-01 16:23:32]  *** Error codes and diagnostics ***
[2026-05-01 16:23:32]     "exeErrorCode": 0,
[2026-05-01 16:23:32]     "pilotErrorCode": 0,
[2026-05-01 16:23:32]  *** Listing of results directory ***
[2026-05-01 16:23:32] total 501816
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 17:54 pilot3.tar.gz
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 17:55 queuedata.json
[2026-05-01 16:23:32] -rwx------. 1 boincer umatlas     36322 Apr 30 17:57 runpilot2-wrapper.sh
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas       100 Apr 30 21:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 16:23:32] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 21:31 run_atlas
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas       105 Apr 30 21:31 job.xml
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas 321026776 Apr 30 21:31 EVNT.50017157._000027.pool.root.1
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 21:31 start_atlas.sh
[2026-05-01 16:23:32] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 21:31 shared
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas    697405 Apr 30 21:31 input.tar.gz
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas         0 Apr 30 21:31 boinc_lockfile
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas      2529 Apr 30 21:31 pandaJob.out
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas        57 Apr 30 21:31 setup.sh.local
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas   1001806 Apr 30 21:31 agis_schedconf.cvmfs.json
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas       435 Apr 30 21:32 workernode_map.json
[2026-05-01 16:23:32] drwx------. 5 boincer umatlas      4096 Apr 30 21:32 pilot3
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas      6439 May  1 16:20 init_data.xml
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas 176397102 May  1 16:22 HITS.50017163._000670.pool.root.1
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas       489 May  1 16:22 boinc_task_state.xml
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas      1044 May  1 16:22 memory_monitor_summary.json
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas   1508687 May  1 16:22 agis_ddmendpoints.agis.ALL.json
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas    847329 May  1 16:22 log.50017163._000670.job.log.tgz.1
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas      6400 May  1 16:22 heartbeat_new.json
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas      6291 May  1 16:22 heartbeat.json
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas        95 May  1 16:23 pilot_heartbeat.json
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas        29 May  1 16:23 wrapper_checkpoint.txt
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas      8192 May  1 16:23 boinc_mmap_file
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas      4821 May  1 16:23 pilotlog.txt
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas   5302133 May  1 16:23 log.50017163._000670.job.log.1
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas       357 May  1 16:23 output.list
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas       410 May  1 16:23 runtime_log
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas   6164480 May  1 16:23 result.tar.gz
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas      8965 May  1 16:23 runtime_log.err
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas       659 May  1 16:23 d04c494e58a1.diag
[2026-05-01 16:23:32] -rw-r--r--. 1 boincer umatlas     21289 May  1 16:23 stderr.txt
[2026-05-01 16:23:32] HITS file was successfully produced:
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas 176397102 May  1 16:22 shared/HITS.pool.root.1
[2026-05-01 16:23:32]  *** Contents of shared directory: ***
[2026-05-01 16:23:32] total 492496
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas 321026776 Apr 30 21:31 ATLAS.root_0
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 21:31 start_atlas.sh
[2026-05-01 16:23:32] -rw-r--r--. 2 boincer umatlas    697405 Apr 30 21:31 input.tar.gz
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas 176397102 May  1 16:22 HITS.pool.root.1
[2026-05-01 16:23:32] -rw-------. 1 boincer umatlas   6164480 May  1 16:23 result.tar.gz
16:23:34 (988059): run_atlas exited; CPU time 109350.964320
16:23:34 (988059): called boinc_finish(0)

</stderr_txt>
]]>

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