Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:02:55 (3964461): wrapper (7.7.26015): starting
12:02:55 (3964461): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 12:02:55] Arguments: --nthreads 4
[2026-05-01 12:02:55] Threads: 4
[2026-05-01 12:02:55] Checking for CVMFS
[2026-05-01 12:02:55] No cvmfs_config command found, will try listing directly
[2026-05-01 12:02:55] CVMFS is ok
[2026-05-01 12:02:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 12:02:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 12:02:55] Further information can be found at the LHC@home message board.
[2026-05-01 12:02:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 12:02:55] Checking for apptainer binary...
[2026-05-01 12:02:55] which: no apptainer in ((null))
[2026-05-01 12:02:55] apptainer is not installed, using version from CVMFS
[2026-05-01 12:02:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 12:02:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/15/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-05-01 12:02:55] apptainer works
[2026-05-01 12:02:55] Set ATHENA_PROC_NUMBER=4
[2026-05-01 12:02:55] Set ATHENA_CORE_NUMBER=4
[2026-05-01 12:02:55] Starting ATLAS job with PandaID=7122983555
[2026-05-01 12:02:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 15:12:52]  *** The last 200 lines of the pilot log: ***
[2026-05-01 15:12:52] 2026-05-01 13:12:19,158 | INFO     | fitting pss+swap vs Time
[2026-05-01 15:12:52] 2026-05-01 13:12:19,159 | INFO     | sum of square deviations: 1995283922.5
[2026-05-01 15:12:52] 2026-05-01 13:12:19,160 | INFO     | sum of deviations: 16902646861.499996
[2026-05-01 15:12:52] 2026-05-01 13:12:19,160 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,160 | INFO     | mean y: 2302470.4784946237
[2026-05-01 15:12:52] 2026-05-01 13:12:19,160 | INFO     | intersect: 2302470.4784946237
[2026-05-01 15:12:52] 2026-05-01 13:12:19,161 | INFO     | chi2: 2.168496807738066
[2026-05-01 15:12:52] 2026-05-01 13:12:19,161 | INFO     | sum of square deviations: 1838657730.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,162 | INFO     | sum of deviations: 28037767879.000004
[2026-05-01 15:12:52] 2026-05-01 13:12:19,162 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,162 | INFO     | mean y: 2313062.8011049726
[2026-05-01 15:12:52] 2026-05-01 13:12:19,162 | INFO     | intersect: 2313062.8011049726
[2026-05-01 15:12:52] 2026-05-01 13:12:19,163 | INFO     | chi2: 1.3550466928310423
[2026-05-01 15:12:52] 2026-05-01 13:12:19,163 | INFO     | current chi2=1.3550466928310423 (change=37.51216566260589 %)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,163 | INFO     | sum of square deviations: 1690450300.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,164 | INFO     | sum of deviations: 27203649151.5
[2026-05-01 15:12:52] 2026-05-01 13:12:19,164 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,164 | INFO     | mean y: 2312204.3011363638
[2026-05-01 15:12:52] 2026-05-01 13:12:19,164 | INFO     | intersect: 2312204.3011363638
[2026-05-01 15:12:52] 2026-05-01 13:12:19,165 | INFO     | chi2: 1.3555555412787652
[2026-05-01 15:12:52] 2026-05-01 13:12:19,165 | INFO     | current chi2=1.3555555412787652 (change=-0.03755209694359718 %)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,165 | INFO     | right removable region: 175
[2026-05-01 15:12:52] 2026-05-01 13:12:19,165 | INFO     | sum of square deviations: 1838657730.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,166 | INFO     | sum of deviations: -8211231593.999999
[2026-05-01 15:12:52] 2026-05-01 13:12:19,166 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,166 | INFO     | mean y: 2326620.4861878455
[2026-05-01 15:12:52] 2026-05-01 13:12:19,166 | INFO     | intersect: 2326620.4861878455
[2026-05-01 15:12:52] 2026-05-01 13:12:19,167 | INFO     | chi2: 0.8359774551171546
[2026-05-01 15:12:52] 2026-05-01 13:12:19,167 | INFO     | current chi2=0.8359774551171546 (change=61.4489884359501 %)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,167 | INFO     | sum of square deviations: 1690450300.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,168 | INFO     | sum of deviations: -7833129865.000001
[2026-05-01 15:12:52] 2026-05-01 13:12:19,168 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,168 | INFO     | mean y: 2326231.659090909
[2026-05-01 15:12:52] 2026-05-01 13:12:19,169 | INFO     | intersect: 2326231.659090909
[2026-05-01 15:12:52] 2026-05-01 13:12:19,169 | INFO     | chi2: 0.8362634216593254
[2026-05-01 15:12:52] 2026-05-01 13:12:19,169 | INFO     | current chi2=0.8362634216593254 (change=-0.03420744667459471 %)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,169 | INFO     | left removable region: 10
[2026-05-01 15:12:52] 2026-05-01 13:12:19,169 | INFO     | sum of square deviations: 1392881930.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,170 | INFO     | sum of deviations: 3194175207.9999995
[2026-05-01 15:12:52] 2026-05-01 13:12:19,170 | INFO     | mean x (centered): 0.0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,170 | INFO     | mean y: 2337951.309090909
[2026-05-01 15:12:52] 2026-05-01 13:12:19,171 | INFO     | intersect: 2337951.309090909
[2026-05-01 15:12:52] 2026-05-01 13:12:19,171 | INFO     | chi2: 0.0013143314709898701
[2026-05-01 15:12:52] 2026-05-01 13:12:19,171 | INFO     | current memory leak: 2.29 B/s (using 165 data points, chi2=0.00)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,171 | INFO     | could have reported an average CPU frequency of 2514 MHz (10 samples)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,172 | INFO     | ..............................
[2026-05-01 15:12:52] 2026-05-01 13:12:19,172 | INFO     | . Timing measurements:
[2026-05-01 15:12:52] 2026-05-01 13:12:19,172 | INFO     | . get job = 0 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,173 | INFO     | . initial setup = 6 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | . payload setup = 10 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | . stage-in = 0 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | . payload execution = 11317 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | . stage-out = 1 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | . log creation = 0 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,174 | INFO     | ..............................
[2026-05-01 15:12:52] 2026-05-01 13:12:19,182 | INFO     | sufficient remaining disk space (30845960192 B)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,183 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,203 | INFO     | size of work directory /var/lib/boinc/var/slot12/slots/15/PanDA_Pilot-7122983555: 3015891 B (within 5033164800 B limit)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,203 | INFO     | pfn file=/var/lib/boinc/var/slot12/slots/15/PanDA_Pilot-7122983555/HITS.50016853._001195.pool.root.1 does not exist (skip from workdir size calculation)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,203 | INFO     | total size of present files: 0 B (workdir size: 3015891 B)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,203 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot12/slots/15/PanDA_Pilot-7122983555/HITS.50016853._001195.pool.root.1 since it does not exist
[2026-05-01 15:12:52] 2026-05-01 13:12:19,292 | INFO     | 
[2026-05-01 15:12:52] 2026-05-01 13:12:19,292 | INFO     | job summary report
[2026-05-01 15:12:52] 2026-05-01 13:12:19,292 | INFO     | --------------------------------------------------
[2026-05-01 15:12:52] 2026-05-01 13:12:19,292 | INFO     | PanDA job id: 7122983555
[2026-05-01 15:12:52] 2026-05-01 13:12:19,292 | INFO     | task id: 50016853
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | errors: (none)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | pilot state: finished 
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | transexitcode: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | exeerrorcode: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | exeerrordiag: 
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | exitcode: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,293 | INFO     | exitmsg: OK
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | cpuconsumptiontime: 42113 s
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | nevents: 400
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | neventsw: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | pid: 3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | pgrp: 3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | corecount: 4
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | event service: False
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | sizes: {0: 2274622, 1: 2277120, 12: 2277120, 11331: 2306274, 11333: 2315352, 11334: 2315518}
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | --------------------------------------------------
[2026-05-01 15:12:52] 2026-05-01 13:12:19,294 | INFO     | 
[2026-05-01 15:12:52] 2026-05-01 13:12:19,295 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/15
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,324 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,325 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | job 7122983555 has completed (purged errors)
[2026-05-01 15:12:52] 2026-05-01 13:12:19,326 | INFO     | overall cleanup function is called
[2026-05-01 15:12:52] 2026-05-01 13:12:19,591 | INFO     | number of running child processes to parent process 3982551: 1
[2026-05-01 15:12:52] 2026-05-01 13:12:19,591 | INFO     | maximum number of monitored processes: 6
[2026-05-01 15:12:52] 2026-05-01 13:12:19,591 | INFO     | aborting job monitoring since job object (job id=7122983555) has expired
[2026-05-01 15:12:52] 2026-05-01 13:12:20,122 | INFO     | PID=3970554 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-01 15:12:52] 2026-05-01 13:12:20,122 | INFO     | .. there are 15 such processes running
[2026-05-01 15:12:52] 2026-05-01 13:12:20,335 | INFO     | --- collectZombieJob: --- 10, [3982551]
[2026-05-01 15:12:52] 2026-05-01 13:12:20,335 | INFO     | zombie collector waiting for pid 3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:20,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 15:12:52] 2026-05-01 13:12:20,335 | INFO     | collected zombie processes
[2026-05-01 15:12:52] 2026-05-01 13:12:20,336 | INFO     | will attempt to kill all subprocesses of pid=3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:20,631 | INFO     | process IDs to be killed: [3982551] (in reverse order)
[2026-05-01 15:12:52] 2026-05-01 13:12:20,752 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 15:12:52] 2026-05-01 13:12:20,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 15:12:52] 2026-05-01 13:12:20,764 | INFO     | did not find any defunct processes belonging to 3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:20,775 | INFO     | did not find any defunct processes belonging to 3982551
[2026-05-01 15:12:52] 2026-05-01 13:12:20,775 | INFO     | Ready for new job
[2026-05-01 15:12:52] 2026-05-01 13:12:20,777 | INFO     | ***************************************
[2026-05-01 15:12:52] 2026-05-01 13:12:20,777 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 15:12:52] 2026-05-01 13:12:20,778 | INFO     | ***************************************
[2026-05-01 15:12:52] 2026-05-01 13:12:20,778 | INFO     | 
[2026-05-01 15:12:52] 2026-05-01 13:12:20,781 | INFO     | architecture information:
[2026-05-01 15:12:52] 2026-05-01 13:12:20,782 | INFO     | executing command: cat /etc/os-release
[2026-05-01 15:12:52] 2026-05-01 13:12:20,800 | INFO     | cat /etc/os-release:
[2026-05-01 15:12:52] NAME="CentOS Linux"
[2026-05-01 15:12:52] VERSION="7 (Core)"
[2026-05-01 15:12:52] ID="centos"
[2026-05-01 15:12:52] ID_LIKE="rhel fedora"
[2026-05-01 15:12:52] VERSION_ID="7"
[2026-05-01 15:12:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 15:12:52] ANSI_COLOR="0;31"
[2026-05-01 15:12:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 15:12:52] HOME_URL="https://www.centos.org/"
[2026-05-01 15:12:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 15:12:52] 
[2026-05-01 15:12:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 15:12:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 15:12:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 15:12:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 15:12:52] 
[2026-05-01 15:12:52] 2026-05-01 13:12:20,800 | INFO     | ***************************************
[2026-05-01 15:12:52] 2026-05-01 13:12:21,302 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/15
[2026-05-01 15:12:52] 2026-05-01 13:12:21,321 | INFO     | sufficient remaining disk space (30850154496 B)
[2026-05-01 15:12:52] 2026-05-01 13:12:21,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 15:12:52] 2026-05-01 13:12:21,322 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 15:12:52] 2026-05-01 13:12:21,322 | INFO     | update_server=False
[2026-05-01 15:12:52] 2026-05-01 13:12:21,322 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 15:12:52] 2026-05-01 13:12:21,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 15:12:52] 2026-05-01 13:12:21,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:12:52] 2026-05-01 13:12:21,323 | INFO     | aborting loop
[2026-05-01 15:12:52] 2026-05-01 13:12:21,707 | INFO     | all payload control threads have been joined
[2026-05-01 15:12:52] 2026-05-01 13:12:22,162 | INFO     | all data control threads have been joined
[2026-05-01 15:12:52] 2026-05-01 13:12:22,327 | INFO     | [job] retrieve thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:22,328 | INFO     | [job] job monitor thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:22,344 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:22,603 | INFO     | all job control threads have been joined
[2026-05-01 15:12:52] 2026-05-01 13:12:22,642 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:22,690 | INFO     | [data] copytool_in thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:22,712 | INFO     | [payload] control thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,167 | INFO     | [data] control thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,253 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,316 | INFO     | [payload] failed_post thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,328 | INFO     | [data] copytool_out thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,608 | INFO     | [job] control thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,640 | INFO     | [job] validate thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,737 | INFO     | [payload] validate_post thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:23,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 15:12:52] 2026-05-01 13:12:24,302 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:12:52] 2026-05-01 13:12:25,307 | INFO     | [job] queue monitor thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:27,830 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 15:12:52] 2026-05-01 13:12:32,054 | INFO     | [monitor] cgroup control has ended
[2026-05-01 15:12:52] 2026-05-01 13:12:33,397 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23454065792832)>', '<ExcThread(monitor, started 23453827868416)>']
[2026-05-01 15:12:52] 2026-05-01 13:12:38,422 | INFO     | all workflow threads have been joined
[2026-05-01 15:12:52] 2026-05-01 13:12:38,422 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 15:12:52] 2026-05-01 13:12:38,423 | INFO     | traces error code: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:38,423 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 15:12:52] 2026-05-01 13:12:52,588 | INFO     | PID=3970554 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 15:12:52] 2026-05-01 13:12:52,588 | INFO     | .. there are 15 such processes running
[2026-05-01 15:12:52] 2026-05-01 13:12:52,594 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 15:12:52] 2026-05-01 13:12:52,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 15:12:52] 2026-05-01 13:12:52,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 15:12:52] 2026-05-01 13:12:52,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 15:12:52] 2026-05-01 13:12:52,594 | INFO     | [monitor] control thread has ended
[2026-05-01 15:12:52] 2026-05-01 13:12:52,762 [wrapper] ==== pilot stdout END ====
[2026-05-01 15:12:52] 2026-05-01 13:12:52,766 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 15:12:52] 2026-05-01 13:12:52,768 [wrapper] pilotpid: 3970554
[2026-05-01 15:12:52] 2026-05-01 13:12:52,770 [wrapper] Pilot exit status: 0
[2026-05-01 15:12:52] 2026-05-01 13:12:52,806 [wrapper] pandaids: 7122983555
[2026-05-01 15:12:52] 2026-05-01 13:12:52,874 [wrapper] cleanup supervisor_pilot    5578 3970555
[2026-05-01 15:12:52] 2026-05-01 13:12:52,877 [wrapper] Test setup, not cleaning
[2026-05-01 15:12:52] 2026-05-01 13:12:52,898 [wrapper] apfmon messages muted
[2026-05-01 15:12:52] 2026-05-01 13:12:52,901 [wrapper] ==== wrapper stdout END ====
[2026-05-01 15:12:52] 2026-05-01 13:12:52,904 [wrapper] ==== wrapper stderr END ====
[2026-05-01 15:12:52]  *** Error codes and diagnostics ***
[2026-05-01 15:12:52]     "exeErrorCode": 0,
[2026-05-01 15:12:52]     "pilotErrorCode": 0,
[2026-05-01 15:12:52]  *** Listing of results directory ***
[2026-05-01 15:12:53] total 486992
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc    683926 Apr 30 23:54 pilot3.tar.gz
[2026-05-01 15:12:53] -rwx------. 1 boinc boinc     36322 Apr 30 23:55 runpilot2-wrapper.sh
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc      5631 Apr 30 23:55 queuedata.json
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc       100 May  1 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 15:12:53] -rwxr-xr-x. 1 boinc boinc      7986 May  1 12:02 run_atlas
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc       105 May  1 12:02 job.xml
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc 322208437 May  1 12:02 EVNT.50016848._000048.pool.root.1
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc      6481 May  1 12:02 init_data.xml
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc     15667 May  1 12:02 start_atlas.sh
[2026-05-01 15:12:53] drwxrwx--x. 2 boinc boinc      4096 May  1 12:02 shared
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc    697393 May  1 12:02 input.tar.gz
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc         0 May  1 12:02 boinc_lockfile
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc      2522 May  1 12:02 pandaJob.out
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc   1000776 May  1 12:03 agis_schedconf.cvmfs.json
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc       448 May  1 12:03 workernode_map.json
[2026-05-01 15:12:53] drwx------. 5 boinc boinc      4096 May  1 12:03 pilot3
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc 169561275 May  1 15:11 HITS.50016853._001195.pool.root.1
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc       488 May  1 15:12 boinc_task_state.xml
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc      1046 May  1 15:12 memory_monitor_summary.json
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc   1508687 May  1 15:12 agis_ddmendpoints.agis.ALL.json
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc    316413 May  1 15:12 log.50016853._001195.job.log.tgz.1
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc      6428 May  1 15:12 heartbeat_new.json
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc      6319 May  1 15:12 heartbeat.json
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc        28 May  1 15:12 wrapper_checkpoint.txt
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc      8192 May  1 15:12 boinc_mmap_file
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc        95 May  1 15:12 pilot_heartbeat.json
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc       823 May  1 15:12 pilotlog.txt
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc   1069525 May  1 15:12 log.50016853._001195.job.log.1
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc       357 May  1 15:12 output.list
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc       410 May  1 15:12 runtime_log
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc   1402880 May  1 15:12 result.tar.gz
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc      8845 May  1 15:12 runtime_log.err
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc       665 May  1 15:12 cfd394abcc82.diag
[2026-05-01 15:12:53] -rw-r--r--. 1 boinc boinc     21184 May  1 15:12 stderr.txt
[2026-05-01 15:12:53] HITS file was successfully produced:
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc 169561275 May  1 15:11 shared/HITS.pool.root.1
[2026-05-01 15:12:53]  *** Contents of shared directory: ***
[2026-05-01 15:12:53] total 482328
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc 322208437 May  1 12:02 ATLAS.root_0
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc     15667 May  1 12:02 start_atlas.sh
[2026-05-01 15:12:53] -rw-r--r--. 2 boinc boinc    697393 May  1 12:02 input.tar.gz
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc 169561275 May  1 15:11 HITS.pool.root.1
[2026-05-01 15:12:53] -rw-------. 1 boinc boinc   1402880 May  1 15:12 result.tar.gz
15:12:54 (3964461): run_atlas exited; CPU time 42495.635671
15:12:54 (3964461): called boinc_finish(0)

</stderr_txt>
]]>

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