Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:44:00 (20459): wrapper (7.7.26015): starting
13:44:00 (20459): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 13:44:00] Arguments: --nthreads 8
[2026-05-01 13:44:00] Threads: 8
[2026-05-01 13:44:00] Checking for CVMFS
[2026-05-01 13:44:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 13:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 13:44:04] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 13:44:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 13:44:06] 2.11.2.0 15381 22719 101924 159093 3 53 14894987 25165824 96 130560 0 7689282 99.931 5107290 8652 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 13:44:06] CVMFS is ok
[2026-05-01 13:44:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:44:06] Checking for apptainer binary...
[2026-05-01 13:44:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 13:44:06] Running /usr/bin/apptainer --version
[2026-05-01 13:44:06] apptainer version 1.3.2-1.el7
[2026-05-01 13:44:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:44:17] cg-vwn426.simple-grid.lan
[2026-05-01 13:44:17] apptainer works
[2026-05-01 13:44:17] Set ATHENA_PROC_NUMBER=8
[2026-05-01 13:44:17] Set ATHENA_CORE_NUMBER=8
[2026-05-01 13:44:17] Starting ATLAS job with PandaID=7122982519
[2026-05-01 13:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 18:05:16]  *** The last 200 lines of the pilot log: ***
[2026-05-01 18:05:16] 2026-05-01 16:04:15,158 | INFO     | fitting pss+swap vs Time
[2026-05-01 18:05:16] 2026-05-01 16:04:15,159 | INFO     | sum of square deviations: 4504437945.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,161 | INFO     | sum of deviations: 167225651106.5
[2026-05-01 18:05:16] 2026-05-01 16:04:15,161 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,161 | INFO     | mean y: 2425781.348360656
[2026-05-01 18:05:16] 2026-05-01 16:04:15,161 | INFO     | intersect: 2425781.348360656
[2026-05-01 18:05:16] 2026-05-01 16:04:15,162 | INFO     | chi2: 9.972636377097523
[2026-05-01 18:05:16] 2026-05-01 16:04:15,162 | INFO     | sum of square deviations: 4233158440.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,165 | INFO     | sum of deviations: 179764407804.99997
[2026-05-01 18:05:16] 2026-05-01 16:04:15,165 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,165 | INFO     | mean y: 2432676.887029289
[2026-05-01 18:05:16] 2026-05-01 16:04:15,165 | INFO     | intersect: 2432676.887029289
[2026-05-01 18:05:16] 2026-05-01 16:04:15,166 | INFO     | chi2: 9.288010340486133
[2026-05-01 18:05:16] 2026-05-01 16:04:15,166 | INFO     | current chi2=9.288010340486133 (change=6.865045618063993 %)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,166 | INFO     | right removable region: 238
[2026-05-01 18:05:16] 2026-05-01 16:04:15,166 | INFO     | sum of square deviations: 4233158440.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,168 | INFO     | sum of deviations: 78531568848.00002
[2026-05-01 18:05:16] 2026-05-01 16:04:15,169 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,169 | INFO     | mean y: 2475636.5857740585
[2026-05-01 18:05:16] 2026-05-01 16:04:15,169 | INFO     | intersect: 2475636.5857740585
[2026-05-01 18:05:16] 2026-05-01 16:04:15,169 | INFO     | chi2: 4.365404033582478
[2026-05-01 18:05:16] 2026-05-01 16:04:15,170 | INFO     | current chi2=4.365404033582478 (change=56.22617863007853 %)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,170 | INFO     | sum of square deviations: 3972995422.5
[2026-05-01 18:05:16] 2026-05-01 16:04:15,172 | INFO     | sum of deviations: 9175609935.000011
[2026-05-01 18:05:16] 2026-05-01 16:04:15,172 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,172 | INFO     | mean y: 2516251.4615384615
[2026-05-01 18:05:16] 2026-05-01 16:04:15,173 | INFO     | intersect: 2516251.4615384615
[2026-05-01 18:05:16] 2026-05-01 16:04:15,173 | INFO     | chi2: 1.2430484002207391
[2026-05-01 18:05:16] 2026-05-01 16:04:15,173 | INFO     | current chi2=1.2430484002207391 (change=71.52500912497143 %)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,174 | INFO     | sum of square deviations: 3723716330.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,176 | INFO     | sum of deviations: -10235683063.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,176 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,176 | INFO     | mean y: 2528012.8515283843
[2026-05-01 18:05:16] 2026-05-01 16:04:15,176 | INFO     | intersect: 2528012.8515283843
[2026-05-01 18:05:16] 2026-05-01 16:04:15,177 | INFO     | chi2: 0.8251978503253117
[2026-05-01 18:05:16] 2026-05-01 16:04:15,177 | INFO     | current chi2=0.8251978503253117 (change=33.61498633691383 %)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,177 | INFO     | sum of square deviations: 3485088600.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,179 | INFO     | sum of deviations: -4928536480.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,179 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,179 | INFO     | mean y: 2524593.223214286
[2026-05-01 18:05:16] 2026-05-01 16:04:15,180 | INFO     | intersect: 2524593.223214286
[2026-05-01 18:05:16] 2026-05-01 16:04:15,180 | INFO     | chi2: 0.793353021297446
[2026-05-01 18:05:16] 2026-05-01 16:04:15,180 | INFO     | current chi2=0.793353021297446 (change=3.8590538033165886 %)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,180 | INFO     | left removable region: 20
[2026-05-01 18:05:16] 2026-05-01 16:04:15,181 | INFO     | sum of square deviations: 3212467674.5
[2026-05-01 18:05:16] 2026-05-01 16:04:15,183 | INFO     | sum of deviations: 9906093780.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,183 | INFO     | mean x (centered): 0.0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,183 | INFO     | mean y: 2534323.4862385322
[2026-05-01 18:05:16] 2026-05-01 16:04:15,183 | INFO     | intersect: 2534323.4862385322
[2026-05-01 18:05:16] 2026-05-01 16:04:15,183 | INFO     | chi2: 0.0029095340124952944
[2026-05-01 18:05:16] 2026-05-01 16:04:15,184 | INFO     | current memory leak: 3.08 B/s (using 218 data points, chi2=0.00)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,184 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | ..............................
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . Timing measurements:
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . get job = 0 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . initial setup = 130 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . payload setup = 196 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . stage-in = 0 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . payload execution = 14994 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . stage-out = 4 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | . log creation = 1 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,185 | INFO     | ..............................
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | 
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | job summary report
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | --------------------------------------------------
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | PanDA job id: 7122982519
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | task id: 50016853
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | errors: (none)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,310 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | pilot state: finished 
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | transexitcode: 0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | exeerrorcode: 0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | exeerrordiag: 
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | exitcode: 0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | exitmsg: OK
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | cpuconsumptiontime: 56110 s
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | nevents: 400
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | neventsw: 0
[2026-05-01 18:05:16] 2026-05-01 16:04:15,311 | INFO     | pid: 28885
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | pgrp: 28885
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | corecount: 8
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | event service: False
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | sizes: {0: 2274618, 1: 2275303, 2: 2277132, 13: 2277132, 15194: 2308213, 15199: 2317211, 15200: 2317395, 15201: 2317589}
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | --------------------------------------------------
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | 
[2026-05-01 18:05:16] 2026-05-01 16:04:15,312 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-05-01 18:05:16] 2026-05-01 16:04:15,917 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 18:05:16] 2026-05-01 16:04:15,920 | INFO     | job 7122982519 has completed (purged errors)
[2026-05-01 18:05:16] 2026-05-01 16:04:15,921 | INFO     | overall cleanup function is called
[2026-05-01 18:05:16] 2026-05-01 16:04:16,537 | INFO     | PID=24437 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 18:05:16] 2026-05-01 16:04:16,538 | INFO     | .. there are 2 such processes running
[2026-05-01 18:05:16] 2026-05-01 16:04:16,929 | INFO     | --- collectZombieJob: --- 10, [28885]
[2026-05-01 18:05:16] 2026-05-01 16:04:16,930 | INFO     | zombie collector waiting for pid 28885
[2026-05-01 18:05:16] 2026-05-01 16:04:16,930 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 18:05:16] 2026-05-01 16:04:16,930 | INFO     | collected zombie processes
[2026-05-01 18:05:16] 2026-05-01 16:04:16,930 | INFO     | will attempt to kill all subprocesses of pid=28885
[2026-05-01 18:05:16] 2026-05-01 16:04:17,009 | INFO     | process IDs to be killed: [28885] (in reverse order)
[2026-05-01 18:05:16] 2026-05-01 16:04:18,017 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 18:05:16] 2026-05-01 16:04:18,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 18:05:16] 2026-05-01 16:04:18,020 | INFO     | did not find any defunct processes belonging to 28885
[2026-05-01 18:05:16] 2026-05-01 16:04:18,021 | INFO     | did not find any defunct processes belonging to 28885
[2026-05-01 18:05:16] 2026-05-01 16:04:18,022 | INFO     | Ready for new job
[2026-05-01 18:05:16] 2026-05-01 16:04:18,023 | INFO     | ***************************************
[2026-05-01 18:05:16] 2026-05-01 16:04:18,024 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 18:05:16] 2026-05-01 16:04:18,024 | INFO     | ***************************************
[2026-05-01 18:05:16] 2026-05-01 16:04:18,024 | INFO     | 
[2026-05-01 18:05:16] 2026-05-01 16:04:18,024 | INFO     | pilot is running in a VM
[2026-05-01 18:05:16] 2026-05-01 16:04:18,025 | INFO     | architecture information:
[2026-05-01 18:05:16] 2026-05-01 16:04:18,032 | INFO     | executing command: cat /etc/os-release
[2026-05-01 18:05:16] 2026-05-01 16:04:18,361 | INFO     | cat /etc/os-release:
[2026-05-01 18:05:16] NAME="CentOS Linux"
[2026-05-01 18:05:16] VERSION="7 (Core)"
[2026-05-01 18:05:16] ID="centos"
[2026-05-01 18:05:16] ID_LIKE="rhel fedora"
[2026-05-01 18:05:16] VERSION_ID="7"
[2026-05-01 18:05:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 18:05:16] ANSI_COLOR="0;31"
[2026-05-01 18:05:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 18:05:16] HOME_URL="https://www.centos.org/"
[2026-05-01 18:05:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 18:05:16] 
[2026-05-01 18:05:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 18:05:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 18:05:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 18:05:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 18:05:16] 
[2026-05-01 18:05:16] 2026-05-01 16:04:18,361 | INFO     | ***************************************
[2026-05-01 18:05:16] 2026-05-01 16:04:18,865 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-05-01 18:05:16] 2026-05-01 16:04:19,061 | INFO     | sufficient remaining disk space (496046702592 B)
[2026-05-01 18:05:16] 2026-05-01 16:04:19,062 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 18:05:16] 2026-05-01 16:04:19,062 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 18:05:16] 2026-05-01 16:04:19,062 | INFO     | update_server=False
[2026-05-01 18:05:16] 2026-05-01 16:04:19,062 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 18:05:16] 2026-05-01 16:04:19,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 18:05:16] 2026-05-01 16:04:19,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 18:05:16] 2026-05-01 16:04:19,064 | INFO     | aborting loop
[2026-05-01 18:05:16] 2026-05-01 16:04:19,193 | INFO     | all payload control threads have been joined
[2026-05-01 18:05:16] 2026-05-01 16:04:19,904 | INFO     | all data control threads have been joined
[2026-05-01 18:05:16] 2026-05-01 16:04:20,069 | INFO     | [job] retrieve thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,070 | INFO     | [job] job monitor thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,200 | INFO     | [payload] control thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,322 | INFO     | [payload] failed_post thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,325 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 18:05:16] 2026-05-01 16:04:20,365 | INFO     | all job control threads have been joined
[2026-05-01 18:05:16] 2026-05-01 16:04:20,605 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 18:05:16] 2026-05-01 16:04:20,694 | INFO     | [payload] validate_post thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,755 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,908 | INFO     | [data] copytool_in thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:20,911 | INFO     | [data] control thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,030 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,070 | INFO     | [data] copytool_out thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,331 | INFO     | [job] queue monitor thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,357 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,359 | INFO     | [job] validate thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:21,372 | INFO     | [job] control thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:24,615 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:29,132 | INFO     | job.realtimelogging is not enabled
[2026-05-01 18:05:16] 2026-05-01 16:04:30,139 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 18:05:16] 2026-05-01 16:04:48,661 | INFO     | PID=24437 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 18:05:16] 2026-05-01 16:04:48,662 | INFO     | .. there are 2 such processes running
[2026-05-01 18:05:16] 2026-05-01 16:04:48,662 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 18:05:16] 2026-05-01 16:04:48,662 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 18:05:16] 2026-05-01 16:04:48,662 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 18:05:16] 2026-05-01 16:05:06,509 | INFO     | [monitor] cgroup control has ended
[2026-05-01 18:05:16] 2026-05-01 16:05:06,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439644792640)>', '<ExcThread(monitor, started 140439340422912)>']
[2026-05-01 18:05:16] 2026-05-01 16:05:07,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 18:05:16] 2026-05-01 16:05:07,776 | INFO     | [monitor] control thread has ended
[2026-05-01 18:05:16] 2026-05-01 16:05:11,858 | INFO     | all workflow threads have been joined
[2026-05-01 18:05:16] 2026-05-01 16:05:11,859 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 18:05:16] 2026-05-01 16:05:11,859 | INFO     | traces error code: 0
[2026-05-01 18:05:16] 2026-05-01 16:05:11,859 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 18:05:16] 2026-05-01 16:05:12,262 [wrapper] ==== pilot stdout END ====
[2026-05-01 18:05:16] 2026-05-01 16:05:12,318 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 18:05:16] 2026-05-01 16:05:12,351 [wrapper] pilotpid: 24437
[2026-05-01 18:05:16] 2026-05-01 16:05:12,409 [wrapper] Pilot exit status: 0
[2026-05-01 18:05:16] 2026-05-01 16:05:12,890 [wrapper] pandaids: 7122982519
[2026-05-01 18:05:16] 2026-05-01 16:05:14,086 [wrapper] cleanup supervisor_pilot  3426 24438
[2026-05-01 18:05:16] 2026-05-01 16:05:14,148 [wrapper] Test setup, not cleaning
[2026-05-01 18:05:16] 2026-05-01 16:05:14,215 [wrapper] apfmon messages muted
[2026-05-01 18:05:16] 2026-05-01 16:05:14,229 [wrapper] ==== wrapper stdout END ====
[2026-05-01 18:05:16] 2026-05-01 16:05:14,304 [wrapper] ==== wrapper stderr END ====
[2026-05-01 18:05:16]  *** Error codes and diagnostics ***
[2026-05-01 18:05:16]     "exeErrorCode": 0,
[2026-05-01 18:05:16]     "pilotErrorCode": 0,
[2026-05-01 18:05:16]  *** Listing of results directory ***
[2026-05-01 18:05:16] total 491504
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc    683926 Apr 30 23:11 pilot3.tar.gz
[2026-05-01 18:05:16] -rwx------. 1 boinc boinc     36322 Apr 30 23:44 runpilot2-wrapper.sh
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc      5631 Apr 30 23:44 queuedata.json
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc       100 May  1 13:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 18:05:16] -rwxr-xr-x. 1 boinc boinc      7986 May  1 13:44 run_atlas
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc       105 May  1 13:44 job.xml
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc      6306 May  1 13:44 init_data.xml
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc 325829395 May  1 13:44 EVNT.50016848._000035.pool.root.1
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc     15667 May  1 13:44 start_atlas.sh
[2026-05-01 18:05:16] drwxrwx--x. 2 boinc boinc        68 May  1 13:44 shared
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc    697397 May  1 13:44 input.tar.gz
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc         0 May  1 13:44 boinc_lockfile
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc      2520 May  1 13:44 pandaJob.out
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc       415 May  1 13:50 workernode_map.json
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc   1003015 May  1 13:50 agis_schedconf.cvmfs.json
[2026-05-01 18:05:16] drwx------. 5 boinc boinc      4096 May  1 13:50 pilot3
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc 169679578 May  1 18:02 HITS.50016853._000868.pool.root.1
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc       489 May  1 18:03 boinc_task_state.xml
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc        95 May  1 18:04 pilot_heartbeat.json
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc      1011 May  1 18:04 memory_monitor_summary.json
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc   1508687 May  1 18:04 agis_ddmendpoints.agis.ALL.json
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc    409496 May  1 18:04 log.50016853._000868.job.log.tgz.1
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc      6332 May  1 18:04 heartbeat_new.json
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc      6223 May  1 18:04 heartbeat.json
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc      8192 May  1 18:05 boinc_mmap_file
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc        28 May  1 18:05 wrapper_checkpoint.txt
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc      4955 May  1 18:05 pilotlog.txt
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc   1423265 May  1 18:05 log.50016853._000868.job.log.1
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc       357 May  1 18:05 output.list
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc       410 May  1 18:05 runtime_log
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc   1853440 May  1 18:05 result.tar.gz
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc      8439 May  1 18:05 runtime_log.err
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc       655 May  1 18:05 cd1f90712e42.diag
[2026-05-01 18:05:16] -rw-r--r--. 1 boinc boinc     20568 May  1 18:05 stderr.txt
[2026-05-01 18:05:16] HITS file was successfully produced:
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc 169679578 May  1 18:02 shared/HITS.pool.root.1
[2026-05-01 18:05:16]  *** Contents of shared directory: ***
[2026-05-01 18:05:16] total 486412
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc 325829395 May  1 13:44 ATLAS.root_0
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc     15667 May  1 13:44 start_atlas.sh
[2026-05-01 18:05:16] -rw-r--r--. 2 boinc boinc    697397 May  1 13:44 input.tar.gz
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc 169679578 May  1 18:02 HITS.pool.root.1
[2026-05-01 18:05:16] -rw-------. 1 boinc boinc   1853440 May  1 18:05 result.tar.gz
18:05:17 (20459): run_atlas exited; CPU time 56258.888056
18:05:17 (20459): called boinc_finish(0)

</stderr_txt>
]]>

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