Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:05:49 (26926): wrapper (7.7.26015): starting
13:05:49 (26926): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 13:05:49] Arguments: --nthreads 8
[2026-05-01 13:05:49] Threads: 8
[2026-05-01 13:05:49] Checking for CVMFS
[2026-05-01 13:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 13:05:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 13:05:58] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 13:05:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 13:05:59] 2.11.2.0 19079 22697 100012 159092 1 53 19955548 25165824 96 130560 0 9549402 99.902 3945652 5553 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 13:05:59] CVMFS is ok
[2026-05-01 13:05:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:05:59] Checking for apptainer binary...
[2026-05-01 13:05:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 13:05:59] Running /usr/bin/apptainer --version
[2026-05-01 13:06:00] apptainer version 1.3.2-1.el7
[2026-05-01 13:06:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:06:08] cg-vwn478.simple-grid.lan
[2026-05-01 13:06:08] apptainer works
[2026-05-01 13:06:08] Set ATHENA_PROC_NUMBER=8
[2026-05-01 13:06:08] Set ATHENA_CORE_NUMBER=8
[2026-05-01 13:06:08] Starting ATLAS job with PandaID=7122970641
[2026-05-01 13:06:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 16:41:27]  *** The last 200 lines of the pilot log: ***
[2026-05-01 16:41:27] 2026-05-01 14:40:33,170 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,170 | INFO     | log transfer has been attempted: DONE
[2026-05-01 16:41:27] 2026-05-01 14:40:33,171 | INFO     | job 7122970641 has finished - writing final server update
[2026-05-01 16:41:27] 2026-05-01 14:40:33,171 | INFO     | total number of processed events: 400 (read)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,173 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7122970641/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,174 | INFO     | extracted standard info from prmon json
[2026-05-01 16:41:27] 2026-05-01 14:40:33,174 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 16:41:27] 2026-05-01 14:40:33,174 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 16:41:27] 2026-05-01 14:40:33,174 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 16:41:27] 2026-05-01 14:40:33,178 | INFO     | fitting pss+swap vs Time
[2026-05-01 16:41:27] 2026-05-01 14:40:33,179 | INFO     | sum of square deviations: 2443580700.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,180 | INFO     | sum of deviations: 75032765678.99998
[2026-05-01 16:41:27] 2026-05-01 14:40:33,181 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,181 | INFO     | mean y: 2473125.6984924623
[2026-05-01 16:41:27] 2026-05-01 14:40:33,181 | INFO     | intersect: 2473125.6984924623
[2026-05-01 16:41:27] 2026-05-01 14:40:33,181 | INFO     | chi2: 9.840517221083775
[2026-05-01 16:41:27] 2026-05-01 14:40:33,182 | INFO     | sum of square deviations: 2263977332.5
[2026-05-01 16:41:27] 2026-05-01 14:40:33,183 | INFO     | sum of deviations: 86694387700.5
[2026-05-01 16:41:27] 2026-05-01 14:40:33,183 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,184 | INFO     | mean y: 2482795.902061856
[2026-05-01 16:41:27] 2026-05-01 14:40:33,184 | INFO     | intersect: 2482795.902061856
[2026-05-01 16:41:27] 2026-05-01 14:40:33,184 | INFO     | chi2: 9.189025904034509
[2026-05-01 16:41:27] 2026-05-01 14:40:33,184 | INFO     | current chi2=9.189025904034509 (change=6.620498723922924 %)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,184 | INFO     | right removable region: 193
[2026-05-01 16:41:27] 2026-05-01 14:40:33,185 | INFO     | sum of square deviations: 2263977332.5
[2026-05-01 16:41:27] 2026-05-01 14:40:33,186 | INFO     | sum of deviations: 2413495194.999996
[2026-05-01 16:41:27] 2026-05-01 14:40:33,186 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,186 | INFO     | mean y: 2534762.1134020616
[2026-05-01 16:41:27] 2026-05-01 14:40:33,187 | INFO     | intersect: 2534762.1134020616
[2026-05-01 16:41:27] 2026-05-01 14:40:33,187 | INFO     | chi2: 4.161141165334864
[2026-05-01 16:41:27] 2026-05-01 14:40:33,187 | INFO     | current chi2=4.161141165334864 (change=57.71420270044931 %)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,187 | INFO     | sum of square deviations: 2093397390.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,193 | INFO     | sum of deviations: -53097173852.99999
[2026-05-01 16:41:27] 2026-05-01 14:40:33,193 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,197 | INFO     | mean y: 2584303.5396825396
[2026-05-01 16:41:27] 2026-05-01 14:40:33,198 | INFO     | intersect: 2584303.5396825396
[2026-05-01 16:41:27] 2026-05-01 14:40:33,198 | INFO     | chi2: 1.110194086638823
[2026-05-01 16:41:27] 2026-05-01 14:40:33,198 | INFO     | current chi2=1.110194086638823 (change=73.31996097879363 %)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,199 | INFO     | sum of square deviations: 1931608310.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,200 | INFO     | sum of deviations: -58793246981.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,200 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,200 | INFO     | mean y: 2589554.4782608696
[2026-05-01 16:41:27] 2026-05-01 14:40:33,200 | INFO     | intersect: 2589554.4782608696
[2026-05-01 16:41:27] 2026-05-01 14:40:33,201 | INFO     | chi2: 0.9758712491018463
[2026-05-01 16:41:27] 2026-05-01 14:40:33,201 | INFO     | current chi2=0.9758712491018463 (change=12.099040983333536 %)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,201 | INFO     | left removable region: 15
[2026-05-01 16:41:27] 2026-05-01 14:40:33,201 | INFO     | sum of square deviations: 1748737904.5
[2026-05-01 16:41:27] 2026-05-01 14:40:33,202 | INFO     | sum of deviations: -44426209049.00001
[2026-05-01 16:41:27] 2026-05-01 14:40:33,203 | INFO     | mean x (centered): 0.0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,203 | INFO     | mean y: 2603592.550561798
[2026-05-01 16:41:27] 2026-05-01 14:40:33,203 | INFO     | intersect: 2603592.550561798
[2026-05-01 16:41:27] 2026-05-01 14:40:33,203 | INFO     | chi2: 0.1785808496150464
[2026-05-01 16:41:27] 2026-05-01 14:40:33,203 | INFO     | current memory leak: -25.40 B/s (using 178 data points, chi2=0.18)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | could have reported an average CPU frequency of 2249 MHz (10 samples)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | ..............................
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | . Timing measurements:
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | . get job = 0 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | . initial setup = 126 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,204 | INFO     | . payload setup = 171 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,205 | INFO     | . stage-in = 0 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,205 | INFO     | . payload execution = 12262 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,205 | INFO     | . stage-out = 3 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,205 | INFO     | . log creation = 1 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,205 | INFO     | ..............................
[2026-05-01 16:41:27] 2026-05-01 14:40:33,335 | INFO     | 
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | job summary report
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | --------------------------------------------------
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | PanDA job id: 7122970641
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | task id: 50016880
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | errors: (none)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | pilot state: finished 
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | transexitcode: 0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | exeerrorcode: 0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,336 | INFO     | exeerrordiag: 
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | exitcode: 0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | exitmsg: OK
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | cpuconsumptiontime: 53471 s
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | nevents: 400
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | neventsw: 0
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | pid: 2951
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | pgrp: 2951
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | corecount: 8
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | event service: False
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | sizes: {0: 2274615, 1: 2275300, 2: 2277129, 13: 2277129, 12438: 2307051, 12441: 2316049, 12442: 2316233, 12444: 2316427}
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | --------------------------------------------------
[2026-05-01 16:41:27] 2026-05-01 14:40:33,337 | INFO     | 
[2026-05-01 16:41:27] 2026-05-01 14:40:33,338 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-05-01 16:41:27] 2026-05-01 14:40:33,643 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,643 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,643 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,645 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 16:41:27] 2026-05-01 14:40:33,646 | INFO     | job 7122970641 has completed (purged errors)
[2026-05-01 16:41:27] 2026-05-01 14:40:33,646 | INFO     | overall cleanup function is called
[2026-05-01 16:41:27] 2026-05-01 14:40:34,654 | INFO     | --- collectZombieJob: --- 10, [2951]
[2026-05-01 16:41:27] 2026-05-01 14:40:34,655 | INFO     | zombie collector waiting for pid 2951
[2026-05-01 16:41:27] 2026-05-01 14:40:34,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 16:41:27] 2026-05-01 14:40:34,655 | INFO     | collected zombie processes
[2026-05-01 16:41:27] 2026-05-01 14:40:34,655 | INFO     | will attempt to kill all subprocesses of pid=2951
[2026-05-01 16:41:27] 2026-05-01 14:40:34,713 | INFO     | process IDs to be killed: [2951] (in reverse order)
[2026-05-01 16:41:27] 2026-05-01 14:40:35,658 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 16:41:27] 2026-05-01 14:40:35,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 16:41:27] 2026-05-01 14:40:35,668 | INFO     | did not find any defunct processes belonging to 2951
[2026-05-01 16:41:27] 2026-05-01 14:40:35,670 | INFO     | did not find any defunct processes belonging to 2951
[2026-05-01 16:41:27] 2026-05-01 14:40:35,670 | INFO     | Ready for new job
[2026-05-01 16:41:27] 2026-05-01 14:40:35,672 | INFO     | ***************************************
[2026-05-01 16:41:27] 2026-05-01 14:40:35,672 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 16:41:27] 2026-05-01 14:40:35,672 | INFO     | ***************************************
[2026-05-01 16:41:27] 2026-05-01 14:40:35,672 | INFO     | 
[2026-05-01 16:41:27] 2026-05-01 14:40:35,672 | INFO     | pilot is running in a VM
[2026-05-01 16:41:27] 2026-05-01 14:40:35,673 | INFO     | architecture information:
[2026-05-01 16:41:27] 2026-05-01 14:40:35,681 | INFO     | executing command: cat /etc/os-release
[2026-05-01 16:41:27] 2026-05-01 14:40:35,879 | INFO     | cat /etc/os-release:
[2026-05-01 16:41:27] NAME="CentOS Linux"
[2026-05-01 16:41:27] VERSION="7 (Core)"
[2026-05-01 16:41:27] ID="centos"
[2026-05-01 16:41:27] ID_LIKE="rhel fedora"
[2026-05-01 16:41:27] VERSION_ID="7"
[2026-05-01 16:41:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 16:41:27] ANSI_COLOR="0;31"
[2026-05-01 16:41:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 16:41:27] HOME_URL="https://www.centos.org/"
[2026-05-01 16:41:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 16:41:27] 
[2026-05-01 16:41:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 16:41:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 16:41:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 16:41:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 16:41:27] 
[2026-05-01 16:41:27] 2026-05-01 14:40:35,879 | INFO     | ***************************************
[2026-05-01 16:41:27] 2026-05-01 14:40:36,383 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-05-01 16:41:27] 2026-05-01 14:40:36,526 | INFO     | sufficient remaining disk space (496231251968 B)
[2026-05-01 16:41:27] 2026-05-01 14:40:36,526 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 16:41:27] 2026-05-01 14:40:36,527 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 16:41:27] 2026-05-01 14:40:36,527 | INFO     | update_server=False
[2026-05-01 16:41:27] 2026-05-01 14:40:36,527 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 16:41:27] 2026-05-01 14:40:36,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 16:41:27] 2026-05-01 14:40:36,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 16:41:27] 2026-05-01 14:40:36,530 | INFO     | aborting loop
[2026-05-01 16:41:27] 2026-05-01 14:40:36,952 | INFO     | all payload control threads have been joined
[2026-05-01 16:41:27] 2026-05-01 14:40:37,141 | INFO     | all job control threads have been joined
[2026-05-01 16:41:27] 2026-05-01 14:40:37,386 | INFO     | all data control threads have been joined
[2026-05-01 16:41:27] 2026-05-01 14:40:37,533 | INFO     | [job] retrieve thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:37,536 | INFO     | [job] job monitor thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:37,702 | INFO     | [job] validate thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:37,769 | INFO     | [payload] validate_post thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:37,807 | INFO     | [payload] failed_post thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:37,871 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 16:41:27] 2026-05-01 14:40:37,960 | INFO     | [payload] control thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,148 | INFO     | [job] control thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,345 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 16:41:27] 2026-05-01 14:40:38,393 | INFO     | [data] control thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,535 | INFO     | [data] copytool_out thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,569 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,819 | INFO     | [data] copytool_in thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:38,902 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:39,000 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:39,356 | INFO     | [job] queue monitor thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:41,881 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 16:41:27] 2026-05-01 14:40:53,161 [wrapper] supervise_pilot (15 min periods counter: 15)
[2026-05-01 16:41:27] 2026-05-01 14:41:05,625 | INFO     | PID=30902 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 16:41:27] 2026-05-01 14:41:05,625 | INFO     | .. there are 2 such processes running
[2026-05-01 16:41:27] 2026-05-01 14:41:05,632 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 16:41:27] 2026-05-01 14:41:05,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 16:41:27] 2026-05-01 14:41:05,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 16:41:27] 2026-05-01 14:41:17,050 | INFO     | [monitor] cgroup control has ended
[2026-05-01 16:41:27] 2026-05-01 14:41:17,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639214679872)>', '<ExcThread(monitor, started 139638714922752)>']
[2026-05-01 16:41:27] 2026-05-01 14:41:17,703 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 16:41:27] 2026-05-01 14:41:17,704 | INFO     | [monitor] control thread has ended
[2026-05-01 16:41:27] 2026-05-01 14:41:22,401 | INFO     | all workflow threads have been joined
[2026-05-01 16:41:27] 2026-05-01 14:41:22,402 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 16:41:27] 2026-05-01 14:41:22,402 | INFO     | traces error code: 0
[2026-05-01 16:41:27] 2026-05-01 14:41:22,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 16:41:27] 2026-05-01 14:41:22,591 [wrapper] ==== pilot stdout END ====
[2026-05-01 16:41:27] 2026-05-01 14:41:22,687 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 16:41:27] 2026-05-01 14:41:22,794 [wrapper] pilotpid: 30902
[2026-05-01 16:41:27] 2026-05-01 14:41:22,884 [wrapper] Pilot exit status: 0
[2026-05-01 16:41:27] 2026-05-01 14:41:23,330 [wrapper] pandaids: 7122970641
[2026-05-01 16:41:27] 2026-05-01 14:41:24,459 [wrapper] cleanup supervisor_pilot 20993 30903
[2026-05-01 16:41:27] 2026-05-01 14:41:24,566 [wrapper] Test setup, not cleaning
[2026-05-01 16:41:27] 2026-05-01 14:41:24,648 [wrapper] apfmon messages muted
[2026-05-01 16:41:27] 2026-05-01 14:41:24,727 [wrapper] ==== wrapper stdout END ====
[2026-05-01 16:41:27] 2026-05-01 14:41:24,880 [wrapper] ==== wrapper stderr END ====
[2026-05-01 16:41:27]  *** Error codes and diagnostics ***
[2026-05-01 16:41:27]     "exeErrorCode": 0,
[2026-05-01 16:41:27]     "pilotErrorCode": 0,
[2026-05-01 16:41:27]  *** Listing of results directory ***
[2026-05-01 16:41:27] total 496916
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc    683926 Apr 30 22:35 pilot3.tar.gz
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc      5631 Apr 30 22:38 queuedata.json
[2026-05-01 16:41:27] -rwx------. 1 boinc boinc     36322 Apr 30 22:39 runpilot2-wrapper.sh
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc       100 May  1 13:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 16:41:27] -rwxr-xr-x. 1 boinc boinc      7986 May  1 13:05 run_atlas
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc       105 May  1 13:05 job.xml
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc      6307 May  1 13:05 init_data.xml
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc 326084807 May  1 13:05 EVNT.50016876._000049.pool.root.1
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc     15667 May  1 13:05 start_atlas.sh
[2026-05-01 16:41:27] drwxrwx--x. 2 boinc boinc        68 May  1 13:05 shared
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc    697399 May  1 13:05 input.tar.gz
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc         0 May  1 13:05 boinc_lockfile
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc      2515 May  1 13:06 pandaJob.out
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc       415 May  1 13:12 workernode_map.json
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc   1003015 May  1 13:12 agis_schedconf.cvmfs.json
[2026-05-01 16:41:27] drwx------. 5 boinc boinc      4096 May  1 13:12 pilot3
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc 175540538 May  1 16:38 HITS.50016880._001216.pool.root.1
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc       489 May  1 16:39 boinc_task_state.xml
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc      1021 May  1 16:40 memory_monitor_summary.json
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc   1508687 May  1 16:40 agis_ddmendpoints.agis.ALL.json
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc    380714 May  1 16:40 log.50016880._001216.job.log.tgz.1
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc      6346 May  1 16:40 heartbeat_new.json
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc      6237 May  1 16:40 heartbeat.json
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc        95 May  1 16:41 pilot_heartbeat.json
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc      8192 May  1 16:41 boinc_mmap_file
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc        28 May  1 16:41 wrapper_checkpoint.txt
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc      4883 May  1 16:41 pilotlog.txt
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc   1164428 May  1 16:41 log.50016880._001216.job.log.1
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc       357 May  1 16:41 output.list
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc       410 May  1 16:41 runtime_log
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc   1566720 May  1 16:41 result.tar.gz
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc      8439 May  1 16:41 runtime_log.err
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc       656 May  1 16:41 be147ed4b2ee.diag
[2026-05-01 16:41:27] -rw-r--r--. 1 boinc boinc     20627 May  1 16:41 stderr.txt
[2026-05-01 16:41:27] HITS file was successfully produced:
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc 175540538 May  1 16:38 shared/HITS.pool.root.1
[2026-05-01 16:41:27]  *** Contents of shared directory: ***
[2026-05-01 16:41:27] total 492104
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc 326084807 May  1 13:05 ATLAS.root_0
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc     15667 May  1 13:05 start_atlas.sh
[2026-05-01 16:41:27] -rw-r--r--. 2 boinc boinc    697399 May  1 13:05 input.tar.gz
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc 175540538 May  1 16:38 HITS.pool.root.1
[2026-05-01 16:41:27] -rw-------. 1 boinc boinc   1566720 May  1 16:41 result.tar.gz
16:41:29 (26926): run_atlas exited; CPU time 53580.624767
16:41:29 (26926): called boinc_finish(0)

</stderr_txt>
]]>

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