Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:44:33 (29059): wrapper (7.7.26015): starting
10:44:33 (29059): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 10:44:33] Arguments: --nthreads 8
[2026-05-01 10:44:33] Threads: 8
[2026-05-01 10:44:33] Checking for CVMFS
[2026-05-01 10:44:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 10:44:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 10:44:37] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 10:44:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 10:44:39] 2.11.2.0 2379 22538 101068 159084 1 54 19566373 25165824 96 130560 0 7905738 99.884 3123800 4254 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 10:44:39] CVMFS is ok
[2026-05-01 10:44:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 10:44:39] Checking for apptainer binary...
[2026-05-01 10:44:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 10:44:39] Running /usr/bin/apptainer --version
[2026-05-01 10:44:39] apptainer version 1.3.2-1.el7
[2026-05-01 10:44:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 10:44:45] cg-vwn406.simple-grid.lan
[2026-05-01 10:44:45] apptainer works
[2026-05-01 10:44:45] Set ATHENA_PROC_NUMBER=8
[2026-05-01 10:44:45] Set ATHENA_CORE_NUMBER=8
[2026-05-01 10:44:45] Starting ATLAS job with PandaID=7122970558
[2026-05-01 10:44:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 15:32:36]  *** The last 200 lines of the pilot log: ***
[2026-05-01 15:32:36] 2026-05-01 13:31:34,448 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 15:32:36] 2026-05-01 13:31:34,448 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 15:32:36] 2026-05-01 13:31:34,454 | INFO     | fitting pss+swap vs Time
[2026-05-01 15:32:36] 2026-05-01 13:31:34,454 | INFO     | sum of square deviations: 6103286527.5
[2026-05-01 15:32:36] 2026-05-01 13:31:34,457 | INFO     | sum of deviations: 216371177036.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,457 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,457 | INFO     | mean y: 2408378.177777778
[2026-05-01 15:32:36] 2026-05-01 13:31:34,457 | INFO     | intersect: 2408378.177777778
[2026-05-01 15:32:36] 2026-05-01 13:31:34,458 | INFO     | chi2: 11.177071129554445
[2026-05-01 15:32:36] 2026-05-01 13:31:34,459 | INFO     | sum of square deviations: 5770452380.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,461 | INFO     | sum of deviations: 230195978282.0002
[2026-05-01 15:32:36] 2026-05-01 13:31:34,461 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,462 | INFO     | mean y: 2414585.7660377356
[2026-05-01 15:32:36] 2026-05-01 13:31:34,462 | INFO     | intersect: 2414585.7660377356
[2026-05-01 15:32:36] 2026-05-01 13:31:34,462 | INFO     | chi2: 10.465794575110625
[2026-05-01 15:32:36] 2026-05-01 13:31:34,462 | INFO     | current chi2=10.465794575110625 (change=6.36371144282209 %)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,462 | INFO     | right removable region: 264
[2026-05-01 15:32:36] 2026-05-01 13:31:34,463 | INFO     | sum of square deviations: 5770452380.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,465 | INFO     | sum of deviations: 117643568002.00003
[2026-05-01 15:32:36] 2026-05-01 13:31:34,466 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,466 | INFO     | mean y: 2453617.5849056602
[2026-05-01 15:32:36] 2026-05-01 13:31:34,466 | INFO     | intersect: 2453617.5849056602
[2026-05-01 15:32:36] 2026-05-01 13:31:34,466 | INFO     | chi2: 5.386463053136078
[2026-05-01 15:32:36] 2026-05-01 13:31:34,467 | INFO     | current chi2=5.386463053136078 (change=51.807920065094905 %)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,467 | INFO     | sum of square deviations: 5449944045.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,470 | INFO     | sum of deviations: 34524644213.999985
[2026-05-01 15:32:36] 2026-05-01 13:31:34,470 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,470 | INFO     | mean y: 2493138.2384615387
[2026-05-01 15:32:36] 2026-05-01 13:31:34,470 | INFO     | intersect: 2493138.2384615387
[2026-05-01 15:32:36] 2026-05-01 13:31:34,470 | INFO     | chi2: 1.6574034262270925
[2026-05-01 15:32:36] 2026-05-01 13:31:34,471 | INFO     | current chi2=1.6574034262270925 (change=69.23020895386765 %)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,471 | INFO     | sum of square deviations: 5141528960.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,473 | INFO     | sum of deviations: 776488702.9999962
[2026-05-01 15:32:36] 2026-05-01 13:31:34,474 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,474 | INFO     | mean y: 2509714.9921568627
[2026-05-01 15:32:36] 2026-05-01 13:31:34,474 | INFO     | intersect: 2509714.9921568627
[2026-05-01 15:32:36] 2026-05-01 13:31:34,474 | INFO     | chi2: 0.835690254113647
[2026-05-01 15:32:36] 2026-05-01 13:31:34,475 | INFO     | current chi2=0.835690254113647 (change=49.5783439994444 %)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,475 | INFO     | sum of square deviations: 4844974562.5
[2026-05-01 15:32:36] 2026-05-01 13:31:34,477 | INFO     | sum of deviations: -760717885.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | mean y: 2510506.248
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | intersect: 2510506.248
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | chi2: 0.8250009820995396
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | current chi2=0.8250009820995396 (change=1.2790949710720985 %)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,478 | INFO     | left removable region: 20
[2026-05-01 15:32:36] 2026-05-01 13:31:34,479 | INFO     | sum of square deviations: 4504437945.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,481 | INFO     | sum of deviations: 15833338089.500021
[2026-05-01 15:32:36] 2026-05-01 13:31:34,481 | INFO     | mean x (centered): 0.0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,481 | INFO     | mean y: 2519238.5040983604
[2026-05-01 15:32:36] 2026-05-01 13:31:34,482 | INFO     | intersect: 2519238.5040983604
[2026-05-01 15:32:36] 2026-05-01 13:31:34,482 | INFO     | chi2: 0.005052767825989854
[2026-05-01 15:32:36] 2026-05-01 13:31:34,482 | INFO     | current memory leak: 3.52 B/s (using 244 data points, chi2=0.01)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,483 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,483 | INFO     | ..............................
[2026-05-01 15:32:36] 2026-05-01 13:31:34,483 | INFO     | . Timing measurements:
[2026-05-01 15:32:36] 2026-05-01 13:31:34,483 | INFO     | . get job = 0 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . initial setup = 117 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . payload setup = 220 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . stage-in = 0 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . payload execution = 16592 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . stage-out = 4 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | . log creation = 1 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,484 | INFO     | ..............................
[2026-05-01 15:32:36] 2026-05-01 13:31:34,653 | INFO     | 
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | job summary report
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | --------------------------------------------------
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | PanDA job id: 7122970558
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | task id: 50016880
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | errors: (none)
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | pilot state: finished 
[2026-05-01 15:32:36] 2026-05-01 13:31:34,654 | INFO     | transexitcode: 0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | exeerrorcode: 0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | exeerrordiag: 
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | exitcode: 0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | exitmsg: OK
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | cpuconsumptiontime: 62198 s
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | nevents: 400
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | neventsw: 0
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | pid: 5162
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | pgrp: 5162
[2026-05-01 15:32:36] 2026-05-01 13:31:34,655 | INFO     | corecount: 8
[2026-05-01 15:32:36] 2026-05-01 13:31:34,656 | INFO     | event service: False
[2026-05-01 15:32:36] 2026-05-01 13:31:34,656 | INFO     | sizes: {0: 2275840, 1: 2268611, 2: 2278326, 12: 2278354, 16817: 2310184, 16821: 2319456, 16824: 2319640, 16826: 2319834}
[2026-05-01 15:32:36] 2026-05-01 13:31:34,656 | INFO     | --------------------------------------------------
[2026-05-01 15:32:36] 2026-05-01 13:31:34,656 | INFO     | 
[2026-05-01 15:32:36] 2026-05-01 13:31:34,656 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-05-01 15:32:36] 2026-05-01 13:31:35,171 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 15:32:36] 2026-05-01 13:31:35,174 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,174 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 15:32:36] 2026-05-01 13:31:35,174 | INFO     | job 7122970558 has completed (purged errors)
[2026-05-01 15:32:36] 2026-05-01 13:31:35,174 | INFO     | overall cleanup function is called
[2026-05-01 15:32:36] 2026-05-01 13:31:36,183 | INFO     | --- collectZombieJob: --- 10, [5162]
[2026-05-01 15:32:36] 2026-05-01 13:31:36,184 | INFO     | zombie collector waiting for pid 5162
[2026-05-01 15:32:36] 2026-05-01 13:31:36,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 15:32:36] 2026-05-01 13:31:36,184 | INFO     | collected zombie processes
[2026-05-01 15:32:36] 2026-05-01 13:31:36,184 | INFO     | will attempt to kill all subprocesses of pid=5162
[2026-05-01 15:32:36] 2026-05-01 13:31:36,250 | INFO     | process IDs to be killed: [5162] (in reverse order)
[2026-05-01 15:32:36] 2026-05-01 13:31:37,234 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 15:32:36] 2026-05-01 13:31:37,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 15:32:36] 2026-05-01 13:31:37,236 | INFO     | did not find any defunct processes belonging to 5162
[2026-05-01 15:32:36] 2026-05-01 13:31:37,238 | INFO     | did not find any defunct processes belonging to 5162
[2026-05-01 15:32:36] 2026-05-01 13:31:37,238 | INFO     | Ready for new job
[2026-05-01 15:32:36] 2026-05-01 13:31:37,240 | INFO     | ***************************************
[2026-05-01 15:32:36] 2026-05-01 13:31:37,240 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 15:32:36] 2026-05-01 13:31:37,240 | INFO     | ***************************************
[2026-05-01 15:32:36] 2026-05-01 13:31:37,241 | INFO     | 
[2026-05-01 15:32:36] 2026-05-01 13:31:37,241 | INFO     | pilot is running in a VM
[2026-05-01 15:32:36] 2026-05-01 13:31:37,245 | INFO     | architecture information:
[2026-05-01 15:32:36] 2026-05-01 13:31:37,259 | INFO     | executing command: cat /etc/os-release
[2026-05-01 15:32:36] 2026-05-01 13:31:37,550 | INFO     | cat /etc/os-release:
[2026-05-01 15:32:36] NAME="CentOS Linux"
[2026-05-01 15:32:36] VERSION="7 (Core)"
[2026-05-01 15:32:36] ID="centos"
[2026-05-01 15:32:36] ID_LIKE="rhel fedora"
[2026-05-01 15:32:36] VERSION_ID="7"
[2026-05-01 15:32:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 15:32:36] ANSI_COLOR="0;31"
[2026-05-01 15:32:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 15:32:36] HOME_URL="https://www.centos.org/"
[2026-05-01 15:32:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 15:32:36] 
[2026-05-01 15:32:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 15:32:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 15:32:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 15:32:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 15:32:36] 
[2026-05-01 15:32:36] 2026-05-01 13:31:37,550 | INFO     | ***************************************
[2026-05-01 15:32:36] 2026-05-01 13:31:38,054 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-05-01 15:32:36] 2026-05-01 13:31:38,337 | INFO     | sufficient remaining disk space (495894659072 B)
[2026-05-01 15:32:36] 2026-05-01 13:31:38,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 15:32:36] 2026-05-01 13:31:38,338 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 15:32:36] 2026-05-01 13:31:38,338 | INFO     | update_server=False
[2026-05-01 15:32:36] 2026-05-01 13:31:38,338 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 15:32:36] 2026-05-01 13:31:38,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 15:32:36] 2026-05-01 13:31:38,642 | INFO     | all job control threads have been joined
[2026-05-01 15:32:36] 2026-05-01 13:31:38,670 | INFO     | all payload control threads have been joined
[2026-05-01 15:32:36] 2026-05-01 13:31:38,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:32:36] 2026-05-01 13:31:38,806 | INFO     | aborting loop
[2026-05-01 15:32:36] 2026-05-01 13:31:39,344 | INFO     | [job] retrieve thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:39,370 | INFO     | all data control threads have been joined
[2026-05-01 15:32:36] 2026-05-01 13:31:39,584 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:39,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 15:32:36] 2026-05-01 13:31:39,649 | INFO     | [job] control thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:39,667 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:32:36] 2026-05-01 13:31:39,677 | INFO     | [payload] control thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:39,812 | INFO     | [job] job monitor thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:39,813 | INFO     | [payload] validate_post thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,165 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,346 | INFO     | [data] copytool_out thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,374 | INFO     | [payload] failed_post thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,376 | INFO     | [data] control thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,379 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,541 | INFO     | [data] copytool_in thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,551 | INFO     | [job] validate thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:40,673 | INFO     | [job] queue monitor thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:43,606 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:31:48,734 | INFO     | job.realtimelogging is not enabled
[2026-05-01 15:32:36] 2026-05-01 13:31:49,740 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 15:32:36] 2026-05-01 13:32:08,187 | INFO     | PID=628 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-05-01 15:32:36] 2026-05-01 13:32:08,188 | INFO     | .. there are 2 such processes running
[2026-05-01 15:32:36] 2026-05-01 13:32:08,189 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 15:32:36] 2026-05-01 13:32:08,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 15:32:36] 2026-05-01 13:32:08,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 15:32:36] 2026-05-01 13:32:24,792 | INFO     | [monitor] cgroup control has ended
[2026-05-01 15:32:36] 2026-05-01 13:32:25,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938519250752)>', '<ExcThread(monitor, started 139937944954624)>']
[2026-05-01 15:32:36] 2026-05-01 13:32:26,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 15:32:36] 2026-05-01 13:32:26,299 | INFO     | [monitor] control thread has ended
[2026-05-01 15:32:36] 2026-05-01 13:32:30,321 | INFO     | all workflow threads have been joined
[2026-05-01 15:32:36] 2026-05-01 13:32:30,322 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 15:32:36] 2026-05-01 13:32:30,322 | INFO     | traces error code: 0
[2026-05-01 15:32:36] 2026-05-01 13:32:30,322 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 15:32:36] 2026-05-01 13:32:30,768 [wrapper] ==== pilot stdout END ====
[2026-05-01 15:32:36] 2026-05-01 13:32:30,826 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 15:32:36] 2026-05-01 13:32:30,877 [wrapper] pilotpid: 628
[2026-05-01 15:32:36] 2026-05-01 13:32:30,973 [wrapper] Pilot exit status: 0
[2026-05-01 15:32:36] 2026-05-01 13:32:31,472 [wrapper] pandaids: 7122970558
[2026-05-01 15:32:36] 2026-05-01 13:32:32,534 [wrapper] cleanup supervisor_pilot 12516 629
[2026-05-01 15:32:36] 2026-05-01 13:32:32,637 [wrapper] Test setup, not cleaning
[2026-05-01 15:32:36] 2026-05-01 13:32:32,749 [wrapper] apfmon messages muted
[2026-05-01 15:32:36] 2026-05-01 13:32:32,871 [wrapper] ==== wrapper stdout END ====
[2026-05-01 15:32:36] 2026-05-01 13:32:32,942 [wrapper] ==== wrapper stderr END ====
[2026-05-01 15:32:36]  *** Error codes and diagnostics ***
[2026-05-01 15:32:36]     "exeErrorCode": 0,
[2026-05-01 15:32:36]     "pilotErrorCode": 0,
[2026-05-01 15:32:36]  *** Listing of results directory ***
[2026-05-01 15:32:36] total 494852
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc    683926 Apr 30 22:35 pilot3.tar.gz
[2026-05-01 15:32:36] -rwx------. 1 boinc boinc     36322 Apr 30 22:38 runpilot2-wrapper.sh
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc      5631 Apr 30 22:38 queuedata.json
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc       100 May  1 10:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 15:32:36] -rwxr-xr-x. 1 boinc boinc      7986 May  1 10:44 run_atlas
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc       105 May  1 10:44 job.xml
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc      6307 May  1 10:44 init_data.xml
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc 324412894 May  1 10:44 EVNT.50016876._000046.pool.root.1
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc     15667 May  1 10:44 start_atlas.sh
[2026-05-01 15:32:36] drwxrwx--x. 2 boinc boinc        68 May  1 10:44 shared
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc    697392 May  1 10:44 input.tar.gz
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc         0 May  1 10:44 boinc_lockfile
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc      2515 May  1 10:44 pandaJob.out
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc       415 May  1 10:50 workernode_map.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc   1002922 May  1 10:50 agis_schedconf.cvmfs.json
[2026-05-01 15:32:36] drwx------. 5 boinc boinc      4096 May  1 10:50 pilot3
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc 174231806 May  1 15:29 HITS.50016880._001133.pool.root.1
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc       489 May  1 15:30 boinc_task_state.xml
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc      1013 May  1 15:31 memory_monitor_summary.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc   1508687 May  1 15:31 agis_ddmendpoints.agis.ALL.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc    413026 May  1 15:31 log.50016880._001133.job.log.tgz.1
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc      6337 May  1 15:31 heartbeat_new.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc      6228 May  1 15:31 heartbeat.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc        95 May  1 15:32 pilot_heartbeat.json
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc      4953 May  1 15:32 pilotlog.txt
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc   1564849 May  1 15:32 log.50016880._001133.job.log.1
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc       357 May  1 15:32 output.list
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc       410 May  1 15:32 runtime_log
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc   1996800 May  1 15:32 result.tar.gz
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc      8439 May  1 15:32 runtime_log.err
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc       656 May  1 15:32 bdd5e5a040e3.diag
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc      8192 May  1 15:32 boinc_mmap_file
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc        28 May  1 15:32 wrapper_checkpoint.txt
[2026-05-01 15:32:36] -rw-r--r--. 1 boinc boinc     20437 May  1 15:32 stderr.txt
[2026-05-01 15:32:36] HITS file was successfully produced:
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc 174231806 May  1 15:29 shared/HITS.pool.root.1
[2026-05-01 15:32:36]  *** Contents of shared directory: ***
[2026-05-01 15:32:36] total 489616
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc 324412894 May  1 10:44 ATLAS.root_0
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc     15667 May  1 10:44 start_atlas.sh
[2026-05-01 15:32:36] -rw-r--r--. 2 boinc boinc    697392 May  1 10:44 input.tar.gz
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc 174231806 May  1 15:29 HITS.pool.root.1
[2026-05-01 15:32:36] -rw-------. 1 boinc boinc   1996800 May  1 15:32 result.tar.gz
15:32:37 (29059): run_atlas exited; CPU time 62357.439040
15:32:37 (29059): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN