Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:19:34 (22373): wrapper (7.7.26015): starting
13:19:34 (22373): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 13:19:34] Arguments: --nthreads 8
[2026-05-01 13:19:34] Threads: 8
[2026-05-01 13:19:34] Checking for CVMFS
[2026-05-01 13:19:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 13:19:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 13:19:38] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 13:19:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 13:19:39] 2.11.2.0 2888 22695 101120 159093 3 53 13542336 25165825 96 130560 0 71767234 99.982 9403085 6052 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 13:19:39] CVMFS is ok
[2026-05-01 13:19:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:19:39] Checking for apptainer binary...
[2026-05-01 13:19:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 13:19:39] Running /usr/bin/apptainer --version
[2026-05-01 13:19:39] apptainer version 1.3.2-1.el7
[2026-05-01 13:19:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:20:00] cg-vwn421.simple-grid.lan
[2026-05-01 13:20:00] apptainer works
[2026-05-01 13:20:00] Set ATHENA_PROC_NUMBER=8
[2026-05-01 13:20:00] Set ATHENA_CORE_NUMBER=8
[2026-05-01 13:20:00] Starting ATLAS job with PandaID=7119462063
[2026-05-01 13:20:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/24 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 17:07:40]  *** The last 200 lines of the pilot log: ***
[2026-05-01 17:07:40] 2026-05-01 15:06:48,618 | INFO     | this job has now completed (state=finished)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,618 | INFO     | log transfer has been attempted: DONE
[2026-05-01 17:07:40] 2026-05-01 15:06:48,618 | INFO     | job 7119462063 has finished - writing final server update
[2026-05-01 17:07:40] 2026-05-01 15:06:48,619 | INFO     | total number of processed events: 400 (read)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,621 | INFO     | using path: /var/lib/boinc/slots/24/PanDA_Pilot-7119462063/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,621 | INFO     | extracted standard info from prmon json
[2026-05-01 17:07:40] 2026-05-01 15:06:48,622 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 17:07:40] 2026-05-01 15:06:48,622 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 17:07:40] 2026-05-01 15:06:48,622 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 17:07:40] 2026-05-01 15:06:48,627 | INFO     | fitting pss+swap vs Time
[2026-05-01 17:07:40] 2026-05-01 15:06:48,627 | INFO     | sum of square deviations: 2871616632.5
[2026-05-01 17:07:40] 2026-05-01 15:06:48,629 | INFO     | sum of deviations: 84281225534.99998
[2026-05-01 17:07:40] 2026-05-01 15:06:48,629 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,629 | INFO     | mean y: 2425535.219047619
[2026-05-01 17:07:40] 2026-05-01 15:06:48,630 | INFO     | intersect: 2425535.219047619
[2026-05-01 17:07:40] 2026-05-01 15:06:48,630 | INFO     | chi2: 9.43949715289713
[2026-05-01 17:07:40] 2026-05-01 15:06:48,631 | INFO     | sum of square deviations: 2671343110.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,632 | INFO     | sum of deviations: 96077527352.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,632 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,633 | INFO     | mean y: 2434312.6780487807
[2026-05-01 17:07:40] 2026-05-01 15:06:48,633 | INFO     | intersect: 2434312.6780487807
[2026-05-01 17:07:40] 2026-05-01 15:06:48,633 | INFO     | chi2: 8.775464732828393
[2026-05-01 17:07:40] 2026-05-01 15:06:48,633 | INFO     | current chi2=8.775464732828393 (change=7.034616455866356 %)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,633 | INFO     | right removable region: 204
[2026-05-01 17:07:40] 2026-05-01 15:06:48,634 | INFO     | sum of square deviations: 2671343110.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,636 | INFO     | sum of deviations: 9940260367.999998
[2026-05-01 17:07:40] 2026-05-01 15:06:48,636 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,636 | INFO     | mean y: 2482114.424390244
[2026-05-01 17:07:40] 2026-05-01 15:06:48,636 | INFO     | intersect: 2482114.424390244
[2026-05-01 17:07:40] 2026-05-01 15:06:48,636 | INFO     | chi2: 3.96987797924075
[2026-05-01 17:07:40] 2026-05-01 15:06:48,637 | INFO     | current chi2=3.96987797924075 (change=57.94396761884364 %)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,637 | INFO     | sum of square deviations: 2480604650.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,639 | INFO     | sum of deviations: -46140132088.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,639 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,639 | INFO     | mean y: 2526875.96
[2026-05-01 17:07:40] 2026-05-01 15:06:48,639 | INFO     | intersect: 2526875.96
[2026-05-01 17:07:40] 2026-05-01 15:06:48,639 | INFO     | chi2: 1.0893257456244239
[2026-05-01 17:07:40] 2026-05-01 15:06:48,640 | INFO     | current chi2=1.0893257456244239 (change=72.56022096092836 %)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,640 | INFO     | sum of square deviations: 2299168690.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,642 | INFO     | sum of deviations: -51289207236.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,642 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,642 | INFO     | mean y: 2531104.282051282
[2026-05-01 17:07:40] 2026-05-01 15:06:48,642 | INFO     | intersect: 2531104.282051282
[2026-05-01 17:07:40] 2026-05-01 15:06:48,642 | INFO     | chi2: 0.9784671186053513
[2026-05-01 17:07:40] 2026-05-01 15:06:48,643 | INFO     | current chi2=0.9784671186053513 (change=10.17681143261019 %)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,643 | INFO     | left removable region: 15
[2026-05-01 17:07:40] 2026-05-01 15:06:48,643 | INFO     | sum of square deviations: 2093397390.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,645 | INFO     | sum of deviations: -36985411420.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,645 | INFO     | mean x (centered): 0.0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,645 | INFO     | mean y: 2543527.5396825396
[2026-05-01 17:07:40] 2026-05-01 15:06:48,645 | INFO     | intersect: 2543527.5396825396
[2026-05-01 17:07:40] 2026-05-01 15:06:48,645 | INFO     | chi2: 0.18176478037647784
[2026-05-01 17:07:40] 2026-05-01 15:06:48,646 | INFO     | current memory leak: -17.67 B/s (using 189 data points, chi2=0.18)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,646 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | ..............................
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . Timing measurements:
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . get job = 0 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . initial setup = 123 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . payload setup = 237 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . stage-in = 0 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . payload execution = 12916 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . stage-out = 7 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | . log creation = 1 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,647 | INFO     | ..............................
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | 
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | job summary report
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | --------------------------------------------------
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | PanDA job id: 7119462063
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | task id: 49263191
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | errors: (none)
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | pilot state: finished 
[2026-05-01 17:07:40] 2026-05-01 15:06:48,772 | INFO     | transexitcode: 0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | exeerrorcode: 0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | exeerrordiag: 
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | exitcode: 0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | exitmsg: OK
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | cpuconsumptiontime: 55065 s
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | nevents: 400
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | neventsw: 0
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | pid: 30859
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | pgrp: 30859
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | corecount: 8
[2026-05-01 17:07:40] 2026-05-01 15:06:48,773 | INFO     | event service: False
[2026-05-01 17:07:40] 2026-05-01 15:06:48,774 | INFO     | sizes: {0: 2274700, 1: 2275386, 2: 2277215, 13: 2277215, 13157: 2307433, 13165: 2316433, 13167: 2316617, 13170: 2316811}
[2026-05-01 17:07:40] 2026-05-01 15:06:48,774 | INFO     | --------------------------------------------------
[2026-05-01 17:07:40] 2026-05-01 15:06:48,774 | INFO     | 
[2026-05-01 17:07:40] 2026-05-01 15:06:48,774 | INFO     | executing command: ls -lF /var/lib/boinc/slots/24
[2026-05-01 17:07:40] 2026-05-01 15:06:49,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,304 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,304 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,306 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 17:07:40] 2026-05-01 15:06:49,307 | INFO     | job 7119462063 has completed (purged errors)
[2026-05-01 17:07:40] 2026-05-01 15:06:49,307 | INFO     | overall cleanup function is called
[2026-05-01 17:07:40] 2026-05-01 15:06:50,316 | INFO     | --- collectZombieJob: --- 10, [30859]
[2026-05-01 17:07:40] 2026-05-01 15:06:50,316 | INFO     | zombie collector waiting for pid 30859
[2026-05-01 17:07:40] 2026-05-01 15:06:50,316 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 17:07:40] 2026-05-01 15:06:50,316 | INFO     | collected zombie processes
[2026-05-01 17:07:40] 2026-05-01 15:06:50,316 | INFO     | will attempt to kill all subprocesses of pid=30859
[2026-05-01 17:07:40] 2026-05-01 15:06:50,405 | INFO     | process IDs to be killed: [30859] (in reverse order)
[2026-05-01 17:07:40] 2026-05-01 15:06:50,910 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 17:07:40] 2026-05-01 15:06:50,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 17:07:40] 2026-05-01 15:06:50,913 | INFO     | did not find any defunct processes belonging to 30859
[2026-05-01 17:07:40] 2026-05-01 15:06:50,914 | INFO     | did not find any defunct processes belonging to 30859
[2026-05-01 17:07:40] 2026-05-01 15:06:50,915 | INFO     | Ready for new job
[2026-05-01 17:07:40] 2026-05-01 15:06:50,916 | INFO     | ***************************************
[2026-05-01 17:07:40] 2026-05-01 15:06:50,917 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 17:07:40] 2026-05-01 15:06:50,917 | INFO     | ***************************************
[2026-05-01 17:07:40] 2026-05-01 15:06:50,917 | INFO     | 
[2026-05-01 17:07:40] 2026-05-01 15:06:50,917 | INFO     | pilot is running in a VM
[2026-05-01 17:07:40] 2026-05-01 15:06:50,917 | INFO     | architecture information:
[2026-05-01 17:07:40] 2026-05-01 15:06:50,924 | INFO     | executing command: cat /etc/os-release
[2026-05-01 17:07:40] 2026-05-01 15:06:51,142 | INFO     | cat /etc/os-release:
[2026-05-01 17:07:40] NAME="CentOS Linux"
[2026-05-01 17:07:40] VERSION="7 (Core)"
[2026-05-01 17:07:40] ID="centos"
[2026-05-01 17:07:40] ID_LIKE="rhel fedora"
[2026-05-01 17:07:40] VERSION_ID="7"
[2026-05-01 17:07:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 17:07:40] ANSI_COLOR="0;31"
[2026-05-01 17:07:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 17:07:40] HOME_URL="https://www.centos.org/"
[2026-05-01 17:07:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 17:07:40] 
[2026-05-01 17:07:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 17:07:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 17:07:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 17:07:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 17:07:40] 
[2026-05-01 17:07:40] 2026-05-01 15:06:51,143 | INFO     | ***************************************
[2026-05-01 17:07:40] 2026-05-01 15:06:51,646 | INFO     | executing command: df -mP /var/lib/boinc/slots/24
[2026-05-01 17:07:40] 2026-05-01 15:06:51,975 | INFO     | sufficient remaining disk space (496541630464 B)
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | INFO     | update_server=False
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 17:07:40] 2026-05-01 15:06:51,976 | INFO     | aborting loop
[2026-05-01 17:07:40] 2026-05-01 15:06:52,133 | INFO     | all data control threads have been joined
[2026-05-01 17:07:40] 2026-05-01 15:06:52,300 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 17:07:40] 2026-05-01 15:06:52,446 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 17:07:40] 2026-05-01 15:06:52,462 | INFO     | all job control threads have been joined
[2026-05-01 17:07:40] 2026-05-01 15:06:52,982 | INFO     | [job] retrieve thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:52,982 | INFO     | [job] job monitor thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,099 | INFO     | [payload] failed_post thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,139 | INFO     | [data] control thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,213 | INFO     | [job] validate thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,415 | INFO     | all payload control threads have been joined
[2026-05-01 17:07:40] 2026-05-01 15:06:53,468 | INFO     | [job] control thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,504 | INFO     | [payload] validate_post thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,786 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 17:07:40] 2026-05-01 15:06:53,835 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:53,876 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,236 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,268 | INFO     | [data] copytool_in thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,307 | INFO     | [data] copytool_out thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,325 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,421 | INFO     | [payload] control thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:54,793 | INFO     | [job] queue monitor thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:06:56,455 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 17:07:40] 2026-05-01 15:07:21,244 | INFO     | PID=26379 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 17:07:40] 2026-05-01 15:07:21,245 | INFO     | .. there are 2 such processes running
[2026-05-01 17:07:40] 2026-05-01 15:07:21,245 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 17:07:40] 2026-05-01 15:07:21,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 17:07:40] 2026-05-01 15:07:21,245 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 17:07:40] 2026-05-01 15:07:28,327 | INFO     | [monitor] cgroup control has ended
[2026-05-01 17:07:40] 2026-05-01 15:07:29,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633929938752)>', '<ExcThread(monitor, started 140633620584192)>']
[2026-05-01 17:07:40] 2026-05-01 15:07:30,299 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 17:07:40] 2026-05-01 15:07:30,299 | INFO     | [monitor] control thread has ended
[2026-05-01 17:07:40] 2026-05-01 15:07:34,758 | INFO     | all workflow threads have been joined
[2026-05-01 17:07:40] 2026-05-01 15:07:34,758 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 17:07:40] 2026-05-01 15:07:34,758 | INFO     | traces error code: 0
[2026-05-01 17:07:40] 2026-05-01 15:07:34,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 17:07:40] 2026-05-01 15:07:35,150 [wrapper] ==== pilot stdout END ====
[2026-05-01 17:07:40] 2026-05-01 15:07:35,249 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 17:07:40] 2026-05-01 15:07:35,376 [wrapper] pilotpid: 26379
[2026-05-01 17:07:40] 2026-05-01 15:07:35,481 [wrapper] Pilot exit status: 0
[2026-05-01 17:07:40] 2026-05-01 15:07:36,017 [wrapper] pandaids: 7119462063
[2026-05-01 17:07:40] 2026-05-01 15:07:36,832 [wrapper] cleanup supervisor_pilot 16403 26380
[2026-05-01 17:07:40] 2026-05-01 15:07:36,941 [wrapper] Test setup, not cleaning
[2026-05-01 17:07:40] 2026-05-01 15:07:37,054 [wrapper] apfmon messages muted
[2026-05-01 17:07:40] 2026-05-01 15:07:37,161 [wrapper] ==== wrapper stdout END ====
[2026-05-01 17:07:40] 2026-05-01 15:07:37,293 [wrapper] ==== wrapper stderr END ====
[2026-05-01 17:07:40]  *** Error codes and diagnostics ***
[2026-05-01 17:07:40]     "exeErrorCode": 0,
[2026-05-01 17:07:40]     "pilotErrorCode": 0,
[2026-05-01 17:07:40]  *** Listing of results directory ***
[2026-05-01 17:07:40] total 417396
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc      5631 Apr 30 22:35 queuedata.json
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc    683926 Apr 30 22:35 pilot3.tar.gz
[2026-05-01 17:07:40] -rwx------. 1 boinc boinc     36322 Apr 30 22:35 runpilot2-wrapper.sh
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc       100 May  1 13:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 17:07:40] -rwxr-xr-x. 1 boinc boinc      7986 May  1 13:19 run_atlas
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc       105 May  1 13:19 job.xml
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc 225744427 May  1 13:19 EVNT.49263189._001422.pool.root.1
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc      6307 May  1 13:19 init_data.xml
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc     15667 May  1 13:19 start_atlas.sh
[2026-05-01 17:07:40] drwxrwx--x. 2 boinc boinc        68 May  1 13:19 shared
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc    697422 May  1 13:19 input.tar.gz
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc         0 May  1 13:19 boinc_lockfile
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc      2576 May  1 13:20 pandaJob.out
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc       415 May  1 13:26 workernode_map.json
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc   1003015 May  1 13:27 agis_schedconf.cvmfs.json
[2026-05-01 17:07:40] drwx------. 5 boinc boinc      4096 May  1 13:27 pilot3
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc 194345227 May  1 17:05 HITS.49263191._082299.pool.root.1
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc       488 May  1 17:05 boinc_task_state.xml
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc        95 May  1 17:06 pilot_heartbeat.json
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc      1022 May  1 17:06 memory_monitor_summary.json
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc   1508687 May  1 17:06 agis_ddmendpoints.agis.ALL.json
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc    372103 May  1 17:06 log.49263191._082299.job.log.tgz.1
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc      6354 May  1 17:06 heartbeat_new.json
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc      6245 May  1 17:06 heartbeat.json
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc        28 May  1 17:07 wrapper_checkpoint.txt
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc      8192 May  1 17:07 boinc_mmap_file
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc      4884 May  1 17:07 pilotlog.txt
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc   1230774 May  1 17:07 log.49263191._082299.job.log.1
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc       357 May  1 17:07 output.list
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc       410 May  1 17:07 runtime_log
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc   1617920 May  1 17:07 result.tar.gz
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc      8455 May  1 17:07 runtime_log.err
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc       655 May  1 17:07 bd178bec589d.diag
[2026-05-01 17:07:40] -rw-r--r--. 1 boinc boinc     20614 May  1 17:07 stderr.txt
[2026-05-01 17:07:40] HITS file was successfully produced:
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc 194345227 May  1 17:05 shared/HITS.pool.root.1
[2026-05-01 17:07:40]  *** Contents of shared directory: ***
[2026-05-01 17:07:40] total 412528
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc 225744427 May  1 13:19 ATLAS.root_0
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc     15667 May  1 13:19 start_atlas.sh
[2026-05-01 17:07:40] -rw-r--r--. 2 boinc boinc    697422 May  1 13:19 input.tar.gz
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc 194345227 May  1 17:05 HITS.pool.root.1
[2026-05-01 17:07:40] -rw-------. 1 boinc boinc   1617920 May  1 17:07 result.tar.gz
17:07:42 (22373): run_atlas exited; CPU time 55181.091317
17:07:42 (22373): called boinc_finish(0)

</stderr_txt>
]]>

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