Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:06:03 (2507608): wrapper (7.7.26015): starting
17:06:03 (2507608): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 17:06:03] Arguments: --nthreads 8
[2026-04-30 17:06:03] Threads: 8
[2026-04-30 17:06:03] Checking for CVMFS
[2026-04-30 17:06:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 17:06:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 17:06:04] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 17:06:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 17:06:05] 2.13.3.0 19639 423 148200 159064 1 939 22479961 40960001 22490 16776704 0 5740261 99.745 3927242 18107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 17:06:05] CVMFS is ok
[2026-04-30 17:06:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 17:06:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 17:06:05] Further information can be found at the LHC@home message board.
[2026-04-30 17:06:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 17:06:05] Checking for apptainer binary...
[2026-04-30 17:06:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 17:06:05] Running /usr/bin/apptainer --version
[2026-04-30 17:06:05] apptainer version 1.4.5-3.el9
[2026-04-30 17:06:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 17:06:06] c8-7-3.aglt2.org
[2026-04-30 17:06:06] apptainer works
[2026-04-30 17:06:06] Set ATHENA_PROC_NUMBER=8
[2026-04-30 17:06:06] Set ATHENA_CORE_NUMBER=8
[2026-04-30 17:06:06] Starting ATLAS job with PandaID=7122844637
[2026-04-30 17:06:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 19:59:22]  *** The last 200 lines of the pilot log: ***
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | intersect: 2441517.2710843375
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | chi2: 3.8104413033209705
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | sum of square deviations: 1294014960.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | sum of deviations: 55546481537.99999
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | mean x (centered): 0.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,180 | INFO     | mean y: 2439151.801242236
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | intersect: 2439151.801242236
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | chi2: 3.816629667986074
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | current chi2=3.816629667986074 (change=-0.16240545838378012 %)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | right removable region: 160
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | sum of square deviations: 1294014960.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | sum of deviations: 7950548581.999999
[2026-04-30 19:59:22] 2026-04-30 23:58:48,181 | INFO     | mean x (centered): 0.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | mean y: 2502033.5279503106
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | intersect: 2502033.5279503106
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | chi2: 0.16335736723109143
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | current chi2=0.16335736723109143 (change=95.71290162405289 %)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | sum of square deviations: 1177156955.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | sum of deviations: -2331853222.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | mean x (centered): 0.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | mean y: 2515378.141025641
[2026-04-30 19:59:22] 2026-04-30 23:58:48,182 | INFO     | intersect: 2515378.141025641
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | chi2: 0.0037955433253529466
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | current chi2=0.0037955433253529466 (change=97.67653985266324 %)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | sum of square deviations: 1067554900.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | sum of deviations: -2698507996.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | mean x (centered): 0.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | mean y: 2515891.9205298014
[2026-04-30 19:59:22] 2026-04-30 23:58:48,183 | INFO     | intersect: 2515891.9205298014
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | chi2: 0.003168278519050711
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | current chi2=0.003168278519050711 (change=16.52635084184967 %)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | left removable region: 15
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | sum of square deviations: 945282840.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | sum of deviations: -2722375771.0000005
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | mean x (centered): 0.0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | mean y: 2515859.6551724137
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | intersect: 2515859.6551724137
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | chi2: 0.0029912601666893463
[2026-04-30 19:59:22] 2026-04-30 23:58:48,184 | INFO     | current memory leak: -2.88 B/s (using 145 data points, chi2=0.00)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | ..............................
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . Timing measurements:
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . get job = 0 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . initial setup = 36 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . payload setup = 113 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . stage-in = 0 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . payload execution = 10147 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . stage-out = 1 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | . log creation = 0 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,185 | INFO     | ..............................
[2026-04-30 19:59:22] 2026-04-30 23:58:48,535 | INFO     | 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,535 | INFO     | job summary report
[2026-04-30 19:59:22] 2026-04-30 23:58:48,535 | INFO     | --------------------------------------------------
[2026-04-30 19:59:22] 2026-04-30 23:58:48,535 | INFO     | PanDA job id: 7122844637
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | task id: 50017356
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | errors: (none)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | pilot state: finished 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | transexitcode: 0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | exeerrorcode: 0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | exeerrordiag: 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | exitcode: 0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | exitmsg: OK
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | cpuconsumptiontime: 49972 s
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | nevents: 400
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | neventsw: 0
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | pid: 2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | pgrp: 2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | corecount: 8
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | event service: False
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | sizes: {0: 2276486, 1: 2278315, 10264: 2307388, 10266: 2316442, 10268: 2316644}
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | --------------------------------------------------
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,536 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | job 7122844637 has completed (purged errors)
[2026-04-30 19:59:22] 2026-04-30 23:58:48,642 | INFO     | overall cleanup function is called
[2026-04-30 19:59:22] 2026-04-30 23:58:48,913 | INFO     | PID=2512757 has CPU usage=10.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-30 19:59:22] 2026-04-30 23:58:48,913 | INFO     | .. there are 52 such processes running
[2026-04-30 19:59:22] 2026-04-30 23:58:49,794 | INFO     | --- collectZombieJob: --- 10, [2521691]
[2026-04-30 19:59:22] 2026-04-30 23:58:49,794 | INFO     | zombie collector waiting for pid 2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:49,795 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 19:59:22] 2026-04-30 23:58:49,795 | INFO     | collected zombie processes
[2026-04-30 19:59:22] 2026-04-30 23:58:49,795 | INFO     | will attempt to kill all subprocesses of pid=2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:50,875 | WARNING  | process 2521691 can no longer be monitored (due to stat problems) - aborting
[2026-04-30 19:59:22] 2026-04-30 23:58:50,909 | INFO     | process IDs to be killed: [2521691] (in reverse order)
[2026-04-30 19:59:22] 2026-04-30 23:58:51,227 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 19:59:22] 2026-04-30 23:58:51,227 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 19:59:22] 2026-04-30 23:58:51,324 | INFO     | did not find any defunct processes belonging to 2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:51,334 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 19:59:22] 2026-04-30 23:58:51,334 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 19:59:22] 2026-04-30 23:58:51,335 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-30 19:59:22] 2026-04-30 23:58:51,335 | WARNING  | maxPSS not found in memory monitor output
[2026-04-30 19:59:22] 2026-04-30 23:58:51,335 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-7122844637/payload.stdout) since it has not been created yet
[2026-04-30 19:59:22] 2026-04-30 23:58:51,335 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-30 19:59:22] 2026-04-30 23:58:51,362 | INFO     | did not find any defunct processes belonging to 2521691
[2026-04-30 19:59:22] 2026-04-30 23:58:51,363 | INFO     | Ready for new job
[2026-04-30 19:59:22] 2026-04-30 23:58:51,384 | INFO     | ***************************************
[2026-04-30 19:59:22] 2026-04-30 23:58:51,386 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 19:59:22] 2026-04-30 23:58:51,386 | INFO     | ***************************************
[2026-04-30 19:59:22] 2026-04-30 23:58:51,386 | INFO     | 
[2026-04-30 19:59:22] 2026-04-30 23:58:51,395 | INFO     | architecture information:
[2026-04-30 19:59:22] 2026-04-30 23:58:51,398 | INFO     | executing command: cat /etc/os-release
[2026-04-30 19:59:22] 2026-04-30 23:58:51,432 | INFO     | sufficient remaining disk space (168216756224 B)
[2026-04-30 19:59:22] 2026-04-30 23:58:51,432 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-30 19:59:22] 2026-04-30 23:58:51,432 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-7122844637/HITS.50017356._000048.pool.root.1 since it does not exist
[2026-04-30 19:59:22] 2026-04-30 23:58:51,460 | INFO     | cat /etc/os-release:
[2026-04-30 19:59:22] NAME="CentOS Linux"
[2026-04-30 19:59:22] VERSION="7 (Core)"
[2026-04-30 19:59:22] ID="centos"
[2026-04-30 19:59:22] ID_LIKE="rhel fedora"
[2026-04-30 19:59:22] VERSION_ID="7"
[2026-04-30 19:59:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 19:59:22] ANSI_COLOR="0;31"
[2026-04-30 19:59:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 19:59:22] HOME_URL="https://www.centos.org/"
[2026-04-30 19:59:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 19:59:22] 
[2026-04-30 19:59:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 19:59:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 19:59:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 19:59:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 19:59:22] 
[2026-04-30 19:59:22] 2026-04-30 23:58:51,460 | INFO     | ***************************************
[2026-04-30 19:59:22] 2026-04-30 23:58:51,906 | INFO     | number of running child processes to parent process 2521691: 1
[2026-04-30 19:59:22] 2026-04-30 23:58:51,906 | INFO     | maximum number of monitored processes: 7
[2026-04-30 19:59:22] 2026-04-30 23:58:51,906 | INFO     | aborting job monitoring since job object (job id=7122844637) has expired
[2026-04-30 19:59:22] 2026-04-30 23:58:51,963 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-30 19:59:22] 2026-04-30 23:58:52,033 | INFO     | sufficient remaining disk space (168216756224 B)
[2026-04-30 19:59:22] 2026-04-30 23:58:52,033 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 19:59:22] 2026-04-30 23:58:52,033 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 19:59:22] 2026-04-30 23:58:52,033 | INFO     | update_server=False
[2026-04-30 19:59:22] 2026-04-30 23:58:52,033 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 19:59:22] 2026-04-30 23:58:52,034 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 19:59:22] 2026-04-30 23:58:52,035 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 19:59:22] 2026-04-30 23:58:52,035 | INFO     | will abort loop
[2026-04-30 19:59:22] 2026-04-30 23:58:52,168 | INFO     | all data control threads have been joined
[2026-04-30 19:59:22] 2026-04-30 23:58:52,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 19:59:22] 2026-04-30 23:58:53,039 | INFO     | [job] retrieve thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,040 | INFO     | [job] job monitor thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,112 | INFO     | [payload] failed_post thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,168 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,173 | INFO     | [data] control thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 19:59:22] 2026-04-30 23:58:53,365 | INFO     | all payload control threads have been joined
[2026-04-30 19:59:22] 2026-04-30 23:58:53,527 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,585 | INFO     | [job] validate thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,750 | INFO     | all job control threads have been joined
[2026-04-30 19:59:22] 2026-04-30 23:58:53,771 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:53,820 | INFO     | [data] copytool_in thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:54,040 | INFO     | [data] copytool_out thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:54,092 | INFO     | [payload] validate_post thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:54,277 | INFO     | [job] queue monitor thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:54,373 | INFO     | [payload] control thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:54,756 | INFO     | [job] control thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:58:56,049 | INFO     | [monitor] cgroup control has ended
[2026-04-30 19:59:22] 2026-04-30 23:58:56,566 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:59:02,497 | INFO     | job.realtimelogging is not enabled
[2026-04-30 19:59:22] 2026-04-30 23:59:03,530 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 19:59:22] 2026-04-30 23:59:04,659 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660896229184)>', '<ExcThread(monitor, started 139660550448896)>']
[2026-04-30 19:59:22] 2026-04-30 23:59:09,684 | INFO     | all workflow threads have been joined
[2026-04-30 19:59:22] 2026-04-30 23:59:09,685 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 19:59:22] 2026-04-30 23:59:09,685 | INFO     | traces error code: 0
[2026-04-30 19:59:22] 2026-04-30 23:59:09,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 19:59:22] 2026-04-30 23:59:21,673 | INFO     | PID=2512757 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 19:59:22] 2026-04-30 23:59:21,674 | INFO     | .. there are 52 such processes running
[2026-04-30 19:59:22] 2026-04-30 23:59:21,676 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 19:59:22] 2026-04-30 23:59:21,676 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 19:59:22] 2026-04-30 23:59:21,676 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 19:59:22] 2026-04-30 23:59:21,676 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 19:59:22] 2026-04-30 23:59:21,677 | INFO     | [monitor] control thread has ended
[2026-04-30 19:59:22] 2026-04-30 23:59:21,861 [wrapper] ==== pilot stdout END ====
[2026-04-30 19:59:22] 2026-04-30 23:59:21,864 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 19:59:22] 2026-04-30 23:59:21,866 [wrapper] pilotpid: 2512757
[2026-04-30 19:59:22] 2026-04-30 23:59:21,869 [wrapper] Pilot exit status: 0
[2026-04-30 19:59:22] 2026-04-30 23:59:21,940 [wrapper] pandaids: 7122844637
[2026-04-30 19:59:22] 2026-04-30 23:59:22,192 [wrapper] cleanup supervisor_pilot 3971594 2512758
[2026-04-30 19:59:22] 2026-04-30 23:59:22,211 [wrapper] Test setup, not cleaning
[2026-04-30 19:59:22] 2026-04-30 23:59:22,243 [wrapper] apfmon messages muted
[2026-04-30 19:59:22] 2026-04-30 23:59:22,263 [wrapper] ==== wrapper stdout END ====
[2026-04-30 19:59:22] 2026-04-30 23:59:22,277 [wrapper] ==== wrapper stderr END ====
[2026-04-30 19:59:22]  *** Error codes and diagnostics ***
[2026-04-30 19:59:22]     "exeErrorCode": 0,
[2026-04-30 19:59:22]     "pilotErrorCode": 0,
[2026-04-30 19:59:22]  *** Listing of results directory ***
[2026-04-30 19:59:22] total 436684
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 12:53 pilot3.tar.gz
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 13:21 queuedata.json
[2026-04-30 19:59:22] -rwx------. 1 boincer umatlas     36322 Apr 30 13:21 runpilot2-wrapper.sh
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas       100 Apr 30 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 19:59:22] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 17:06 run_atlas
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas       105 Apr 30 17:06 job.xml
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas 273120880 Apr 30 17:06 EVNT.50017351._000002.pool.root.1
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 17:06 start_atlas.sh
[2026-04-30 19:59:22] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 17:06 shared
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas    697390 Apr 30 17:06 input.tar.gz
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas         0 Apr 30 17:06 boinc_lockfile
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas      2513 Apr 30 17:06 pandaJob.out
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas        57 Apr 30 17:06 setup.sh.local
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas    997574 Apr 30 17:07 agis_schedconf.cvmfs.json
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas   1510091 Apr 30 17:07 agis_ddmendpoints.agis.ALL.json
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas       426 Apr 30 17:07 workernode_map.json
[2026-04-30 19:59:22] drwx------. 5 boincer umatlas      4096 Apr 30 17:07 pilot3
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas      7095 Apr 30 19:56 init_data.xml
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas       487 Apr 30 19:57 boinc_task_state.xml
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas 167301695 Apr 30 19:57 HITS.50017356._000048.pool.root.1
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas      1048 Apr 30 19:58 memory_monitor_summary.json
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas    375495 Apr 30 19:58 log.50017356._000048.job.log.tgz.1
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas      6366 Apr 30 19:58 heartbeat_new.json
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas      6257 Apr 30 19:58 heartbeat.json
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas        27 Apr 30 19:59 wrapper_checkpoint.txt
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas        95 Apr 30 19:59 pilot_heartbeat.json
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas       823 Apr 30 19:59 pilotlog.txt
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 19:59 boinc_mmap_file
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas    931446 Apr 30 19:59 log.50017356._000048.job.log.1
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas       357 Apr 30 19:59 output.list
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas       410 Apr 30 19:59 runtime_log
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas   1320960 Apr 30 19:59 result.tar.gz
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas      8955 Apr 30 19:59 runtime_log.err
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas       657 Apr 30 19:59 8fa52b639cbf.diag
[2026-04-30 19:59:22] -rw-r--r--. 1 boincer umatlas     21467 Apr 30 19:59 stderr.txt
[2026-04-30 19:59:22] HITS file was successfully produced:
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas 167301695 Apr 30 19:57 shared/HITS.pool.root.1
[2026-04-30 19:59:22]  *** Contents of shared directory: ***
[2026-04-30 19:59:22] total 432100
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas 273120880 Apr 30 17:06 ATLAS.root_0
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 17:06 start_atlas.sh
[2026-04-30 19:59:22] -rw-r--r--. 2 boincer umatlas    697390 Apr 30 17:06 input.tar.gz
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas 167301695 Apr 30 19:57 HITS.pool.root.1
[2026-04-30 19:59:22] -rw-------. 1 boincer umatlas   1320960 Apr 30 19:59 result.tar.gz
19:59:24 (2507608): run_atlas exited; CPU time 50306.454785
19:59:24 (2507608): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN