Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:41:41 (2607960): wrapper (7.7.26015): starting
21:41:41 (2607960): wrapper: running run_atlas (--nthreads 12)
[2026-05-01 21:41:41] Arguments: --nthreads 12
[2026-05-01 21:41:41] Threads: 12
[2026-05-01 21:41:41] Checking for CVMFS
[2026-05-01 21:41:41] No cvmfs_config command found, will try listing directly
[2026-05-01 21:41:41] CVMFS is ok
[2026-05-01 21:41:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 21:41:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 21:41:41] Further information can be found at the LHC@home message board.
[2026-05-01 21:41:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 21:41:41] Checking for apptainer binary...
[2026-05-01 21:41:41] which: no apptainer in ((null))
[2026-05-01 21:41:41] apptainer is not installed, using version from CVMFS
[2026-05-01 21:41:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 21:41:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot228/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-05-01 21:41:41] apptainer works
[2026-05-01 21:41:41] Set ATHENA_PROC_NUMBER=12
[2026-05-01 21:41:41] Set ATHENA_CORE_NUMBER=12
[2026-05-01 21:41:41] Starting ATLAS job with PandaID=7122740488
[2026-05-01 21:41:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot228/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 22:25:02]  *** The last 200 lines of the pilot log: ***
[2026-05-01 22:25:02]  ddmendpoint_alt=None
[2026-05-01 22:25:02]  direct_access_lan=False
[2026-05-01 22:25:02]  direct_access_wan=False
[2026-05-01 22:25:02]  domain=
[2026-05-01 22:25:02]  filesize=346095
[2026-05-01 22:25:02]  filetype=log
[2026-05-01 22:25:02]  guid=48bdb9f4-849a-47ff-b9e2-36950986b3cb
[2026-05-01 22:25:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-05-01 22:25:02]  is_altstaged=None
[2026-05-01 22:25:02]  is_tar=False
[2026-05-01 22:25:02]  lfn=log.49863851._006023.job.log.tgz.1
[2026-05-01 22:25:02]  mtime=0
[2026-05-01 22:25:02]  protocol_id=None
[2026-05-01 22:25:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-05-01 22:25:02]  replicas=None
[2026-05-01 22:25:02]  scope=mc23_13p6TeV
[2026-05-01 22:25:02]  status=None
[2026-05-01 22:25:02]  status_code=0
[2026-05-01 22:25:02]  storage_token=
[2026-05-01 22:25:02]  surl=/var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7122740488/log.49863851._006023.job.log.tgz.1
[2026-05-01 22:25:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/a6/log.49863851._006023.job.log.tgz.1
[2026-05-01 22:25:02]  workdir=None
[2026-05-01 22:25:02] ]
[2026-05-01 22:25:02] 2026-05-01 20:23:56,852 | INFO     | transferring file log.49863851._006023.job.log.tgz.1 from /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7122740488/log.49863851._006023.job.log.tgz.1 to /var/lib/
[2026-05-01 22:25:02] 2026-05-01 20:23:56,852 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7122740488/log.49863851._006023.job.log.tgz.1 /var/lib/boinc/var/slot228/slots/1/
[2026-05-01 22:25:02] 2026-05-01 20:23:56,873 | INFO     | adding to output.list: log.49863851._006023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/a6/log.49863851._006023.job.log.tg
[2026-05-01 22:25:02] 2026-05-01 20:23:56,874 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-05-01 22:25:02] 2026-05-01 20:23:56,874 | INFO     | summary of transferred files:
[2026-05-01 22:25:02] 2026-05-01 20:23:56,874 | INFO     |  -- lfn=log.49863851._006023.job.log.tgz.1, status_code=0, status=transferred
[2026-05-01 22:25:02] 2026-05-01 20:23:56,874 | INFO     | stage-out finished correctly
[2026-05-01 22:25:02] 2026-05-01 20:23:56,919 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 22:25:02] 2026-05-01 20:23:58,317 | INFO     | job 7122740488 has state=finished
[2026-05-01 22:25:02] 2026-05-01 20:23:58,318 | INFO     | preparing for final server update for job 7122740488 in state='finished'
[2026-05-01 22:25:02] 2026-05-01 20:23:58,318 | INFO     | reading metadata from: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7122740488/jobReport.json
[2026-05-01 22:25:02] 2026-05-01 20:23:58,319 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot228/slots/1/workernode_map.json
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | INFO     | this job has now completed (state=finished)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | INFO     | log transfer has been attempted: DONE
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | INFO     | job 7122740488 has finished - writing final server update
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4020045/.job.ad'
[2026-05-01 22:25:02] 2026-05-01 20:23:58,320 | INFO     | total number of processed events: 400 (read)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,337 | INFO     | using path: /var/lib/boinc/var/slot228/slots/1/PanDA_Pilot-7122740488/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,337 | INFO     | extracted standard info from prmon json
[2026-05-01 22:25:02] 2026-05-01 20:23:58,337 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 22:25:02] 2026-05-01 20:23:58,337 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | INFO     | fitting pss+swap vs Time
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | INFO     | sum of square deviations: 12176972.5
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | INFO     | sum of deviations: 57352505.00000001
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | INFO     | mean x (centered): 0.0
[2026-05-01 22:25:02] 2026-05-01 20:23:58,338 | INFO     | mean y: 2738289.1764705884
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | intersect: 2738289.1764705884
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | chi2: 0.001011490209600638
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | current memory leak: 4.71 B/s (using 34 data points, chi2=0.00)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | could have reported an average CPU frequency of 3596 MHz (5 samples)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | ..............................
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . Timing measurements:
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . get job = 0 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . initial setup = 4 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . payload setup = 6 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . stage-in = 0 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . payload execution = 2502 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . stage-out = 0 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | . log creation = 0 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,339 | INFO     | ..............................
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | 
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | job summary report
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | --------------------------------------------------
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | PanDA job id: 7122740488
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | task id: 49863851
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | errors: (none)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | pilot state: finished 
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | transexitcode: 0
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | exeerrorcode: 0
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | exeerrordiag: 
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | exitcode: 0
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | exitmsg: OK
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | cpuconsumptiontime: 26563 s
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | nevents: 400
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | neventsw: 0
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | pid: 2618301
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | pgrp: 2618301
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | corecount: 12
[2026-05-01 22:25:02] 2026-05-01 20:23:58,619 | INFO     | event service: False
[2026-05-01 22:25:02] 2026-05-01 20:23:58,620 | INFO     | sizes: {0: 2275398, 1: 2277227, 11: 2277227, 2513: 2302436, 2514: 2311514, 2515: 2311684}
[2026-05-01 22:25:02] 2026-05-01 20:23:58,620 | INFO     | --------------------------------------------------
[2026-05-01 22:25:02] 2026-05-01 20:23:58,620 | INFO     | 
[2026-05-01 22:25:02] 2026-05-01 20:23:58,620 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot228/slots/1
[2026-05-01 22:25:02] 2026-05-01 20:23:58,639 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | job 7122740488 has completed (purged errors)
[2026-05-01 22:25:02] 2026-05-01 20:23:58,640 | INFO     | overall cleanup function is called
[2026-05-01 22:25:02] 2026-05-01 20:23:59,648 | INFO     | --- collectZombieJob: --- 10, [2618301]
[2026-05-01 22:25:02] 2026-05-01 20:23:59,649 | INFO     | zombie collector waiting for pid 2618301
[2026-05-01 22:25:02] 2026-05-01 20:23:59,649 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 22:25:02] 2026-05-01 20:23:59,649 | INFO     | collected zombie processes
[2026-05-01 22:25:02] 2026-05-01 20:23:59,649 | INFO     | will attempt to kill all subprocesses of pid=2618301
[2026-05-01 22:25:02] 2026-05-01 20:23:59,937 | INFO     | process IDs to be killed: [2618301] (in reverse order)
[2026-05-01 22:25:02] 2026-05-01 20:24:00,087 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 22:25:02] 2026-05-01 20:24:00,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 22:25:02] 2026-05-01 20:24:00,110 | INFO     | did not find any defunct processes belonging to 2618301
[2026-05-01 22:25:02] 2026-05-01 20:24:00,131 | INFO     | did not find any defunct processes belonging to 2618301
[2026-05-01 22:25:02] 2026-05-01 20:24:00,131 | INFO     | Ready for new job
[2026-05-01 22:25:02] 2026-05-01 20:24:00,133 | INFO     | ***************************************
[2026-05-01 22:25:02] 2026-05-01 20:24:00,133 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 22:25:02] 2026-05-01 20:24:00,133 | INFO     | ***************************************
[2026-05-01 22:25:02] 2026-05-01 20:24:00,133 | INFO     | 
[2026-05-01 22:25:02] 2026-05-01 20:24:00,139 | INFO     | architecture information:
[2026-05-01 22:25:02] 2026-05-01 20:24:00,140 | INFO     | executing command: cat /etc/os-release
[2026-05-01 22:25:02] 2026-05-01 20:24:00,158 | INFO     | cat /etc/os-release:
[2026-05-01 22:25:02] NAME="CentOS Linux"
[2026-05-01 22:25:02] VERSION="7 (Core)"
[2026-05-01 22:25:02] ID="centos"
[2026-05-01 22:25:02] ID_LIKE="rhel fedora"
[2026-05-01 22:25:02] VERSION_ID="7"
[2026-05-01 22:25:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 22:25:02] ANSI_COLOR="0;31"
[2026-05-01 22:25:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 22:25:02] HOME_URL="https://www.centos.org/"
[2026-05-01 22:25:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 22:25:02] 
[2026-05-01 22:25:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 22:25:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 22:25:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 22:25:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 22:25:02] 
[2026-05-01 22:25:02] 2026-05-01 20:24:00,158 | INFO     | ***************************************
[2026-05-01 22:25:02] 2026-05-01 20:24:00,661 | INFO     | executing command: df -mP /var/lib/boinc/var/slot228/slots/1
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | INFO     | sufficient remaining disk space (102919831552 B)
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | INFO     | update_server=False
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 22:25:02] 2026-05-01 20:24:00,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 22:25:02] 2026-05-01 20:24:00,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 22:25:02] 2026-05-01 20:24:00,677 | INFO     | aborting loop
[2026-05-01 22:25:02] 2026-05-01 20:24:00,779 | INFO     | all job control threads have been joined
[2026-05-01 22:25:02] 2026-05-01 20:24:01,068 | INFO     | all payload control threads have been joined
[2026-05-01 22:25:02] 2026-05-01 20:24:01,681 | INFO     | [job] retrieve thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:01,682 | INFO     | all data control threads have been joined
[2026-05-01 22:25:02] 2026-05-01 20:24:01,683 | INFO     | [job] job monitor thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:01,783 | INFO     | [job] control thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:01,912 | INFO     | [payload] validate_post thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,072 | INFO     | [payload] control thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,182 | INFO     | job.realtimelogging is not enabled
[2026-05-01 22:25:02] 2026-05-01 20:24:02,597 | INFO     | [job] validate thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,682 | INFO     | [data] copytool_out thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,688 | INFO     | [data] control thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,777 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,870 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 22:25:02] 2026-05-01 20:24:02,975 | INFO     | [payload] failed_post thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:02,995 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:03,017 | INFO     | [data] copytool_in thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:03,188 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:03,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 22:25:02] 2026-05-01 20:24:04,393 | INFO     | [job] queue monitor thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:06,976 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 22:25:02] 2026-05-01 20:24:32,100 | INFO     | PID=2612480 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 22:25:02] 2026-05-01 20:24:32,101 | INFO     | .. there are 16 such processes running
[2026-05-01 22:25:02] 2026-05-01 20:24:32,101 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 22:25:02] 2026-05-01 20:24:32,101 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 22:25:02] 2026-05-01 20:24:32,101 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 22:25:02] 2026-05-01 20:24:55,999 | INFO     | [monitor] cgroup control has ended
[2026-05-01 22:25:02] 2026-05-01 20:24:56,843 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456024852288)>', '<ExcThread(monitor, started 23455788709632)>']
[2026-05-01 22:25:02] 2026-05-01 20:24:57,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 22:25:02] 2026-05-01 20:24:57,215 | INFO     | [monitor] control thread has ended
[2026-05-01 22:25:02] 2026-05-01 20:25:01,863 | INFO     | all workflow threads have been joined
[2026-05-01 22:25:02] 2026-05-01 20:25:01,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 22:25:02] 2026-05-01 20:25:01,863 | INFO     | traces error code: 0
[2026-05-01 22:25:02] 2026-05-01 20:25:01,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 22:25:02] 2026-05-01 20:25:01,965 [wrapper] ==== pilot stdout END ====
[2026-05-01 22:25:02] 2026-05-01 20:25:01,967 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 22:25:02] 2026-05-01 20:25:01,968 [wrapper] pilotpid: 2612480
[2026-05-01 22:25:02] 2026-05-01 20:25:01,970 [wrapper] Pilot exit status: 0
[2026-05-01 22:25:02] 2026-05-01 20:25:01,978 [wrapper] pandaids: 7122740488
[2026-05-01 22:25:02] 2026-05-01 20:25:02,068 [wrapper] cleanup supervisor_pilot 2849406 2612481
[2026-05-01 22:25:02] 2026-05-01 20:25:02,071 [wrapper] Test setup, not cleaning
[2026-05-01 22:25:02] 2026-05-01 20:25:02,074 [wrapper] apfmon messages muted
[2026-05-01 22:25:02] 2026-05-01 20:25:02,075 [wrapper] ==== wrapper stdout END ====
[2026-05-01 22:25:02] 2026-05-01 20:25:02,076 [wrapper] ==== wrapper stderr END ====
[2026-05-01 22:25:02]  *** Error codes and diagnostics ***
[2026-05-01 22:25:02]     "exeErrorCode": 0,
[2026-05-01 22:25:02]     "pilotErrorCode": 0,
[2026-05-01 22:25:02]  *** Listing of results directory ***
[2026-05-01 22:25:02] total 468008
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc    683926 Apr 30 13:26 pilot3.tar.gz
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc      5631 Apr 30 13:29 queuedata.json
[2026-05-01 22:25:02] -rwx------. 1 boinc boinc     36322 Apr 30 13:29 runpilot2-wrapper.sh
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc       100 May  1 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 22:25:02] -rwxr-xr-x. 1 boinc boinc      7986 May  1 21:41 run_atlas
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc       105 May  1 21:41 job.xml
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc     15667 May  1 21:41 start_atlas.sh
[2026-05-01 22:25:02] drwxrwx--x. 2 boinc boinc      4096 May  1 21:41 shared
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc    697436 May  1 21:41 input.tar.gz
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc      6631 May  1 21:41 init_data.xml
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc 262639886 May  1 21:41 EVNT.49863848._000247.pool.root.1
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc         0 May  1 21:41 boinc_lockfile
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc      2652 May  1 21:41 pandaJob.out
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc   1003075 May  1 21:41 agis_schedconf.cvmfs.json
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc   1508687 May  1 21:41 agis_ddmendpoints.agis.ALL.json
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc       445 May  1 21:41 workernode_map.json
[2026-05-01 22:25:02] drwx------. 5 boinc boinc      4096 May  1 21:41 pilot3
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc 211205103 May  1 22:23 HITS.49863851._006023.pool.root.1
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc       487 May  1 22:23 boinc_task_state.xml
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc        95 May  1 22:23 pilot_heartbeat.json
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc      1028 May  1 22:23 memory_monitor_summary.json
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc    346095 May  1 22:23 log.49863851._006023.job.log.tgz.1
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc      6371 May  1 22:23 heartbeat_new.json
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc      6262 May  1 22:23 heartbeat.json
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc      8192 May  1 22:25 boinc_mmap_file
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc        27 May  1 22:25 wrapper_checkpoint.txt
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc      4906 May  1 22:25 pilotlog.txt
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc    281683 May  1 22:25 log.49863851._006023.job.log.1
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc       357 May  1 22:25 output.list
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc       410 May  1 22:25 runtime_log
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc    645120 May  1 22:25 result.tar.gz
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc      8846 May  1 22:25 runtime_log.err
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc       661 May  1 22:25 3d2d8fdea6c0.diag
[2026-05-01 22:25:02] -rw-r--r--. 1 boinc boinc     20678 May  1 22:25 stderr.txt
[2026-05-01 22:25:02] HITS file was successfully produced:
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc 211205103 May  1 22:23 shared/HITS.pool.root.1
[2026-05-01 22:25:02]  *** Contents of shared directory: ***
[2026-05-01 22:25:02] total 464084
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc     15667 May  1 21:41 start_atlas.sh
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc    697436 May  1 21:41 input.tar.gz
[2026-05-01 22:25:02] -rw-r--r--. 2 boinc boinc 262639886 May  1 21:41 ATLAS.root_0
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc 211205103 May  1 22:23 HITS.pool.root.1
[2026-05-01 22:25:02] -rw-------. 1 boinc boinc    645120 May  1 22:25 result.tar.gz
22:25:03 (2607960): run_atlas exited; CPU time 26633.187538
22:25:03 (2607960): called boinc_finish(0)

</stderr_txt>
]]>

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