Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:33:10 (2985681): wrapper (7.7.26015): starting
04:33:10 (2985681): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 04:33:11] Arguments: --nthreads 4
[2026-05-04 04:33:11] Threads: 4
[2026-05-04 04:33:11] Checking for CVMFS
[2026-05-04 04:33:11] No cvmfs_config command found, will try listing directly
[2026-05-04 04:33:11] CVMFS is ok
[2026-05-04 04:33:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 04:33:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 04:33:11] Further information can be found at the LHC@home message board.
[2026-05-04 04:33:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 04:33:11] Checking for apptainer binary...
[2026-05-04 04:33:11] which: no apptainer in ((null))
[2026-05-04 04:33:11] apptainer is not installed, using version from CVMFS
[2026-05-04 04:33:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 04:33:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-04 04:33:11] apptainer works
[2026-05-04 04:33:11] Set ATHENA_PROC_NUMBER=4
[2026-05-04 04:33:11] Set ATHENA_CORE_NUMBER=4
[2026-05-04 04:33:11] Starting ATLAS job with PandaID=7122912301
[2026-05-04 04:33:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:54:39 (3125412): wrapper (7.7.26015): starting
04:54:39 (3125412): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 04:54:39] Arguments: --nthreads 4
[2026-05-04 04:54:39] Threads: 4
[2026-05-04 04:54:39] This job has been restarted, cleaning up previous attempt
[2026-05-04 04:54:39] Checking for CVMFS
[2026-05-04 04:54:39] No cvmfs_config command found, will try listing directly
[2026-05-04 04:54:39] CVMFS is ok
[2026-05-04 04:54:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 04:54:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 04:54:39] Further information can be found at the LHC@home message board.
[2026-05-04 04:54:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 04:54:39] Checking for apptainer binary...
[2026-05-04 04:54:39] which: no apptainer in ((null))
[2026-05-04 04:54:39] apptainer is not installed, using version from CVMFS
[2026-05-04 04:54:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 04:54:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-04 04:54:39] apptainer works
[2026-05-04 04:54:39] Set ATHENA_PROC_NUMBER=4
[2026-05-04 04:54:39] Set ATHENA_CORE_NUMBER=4
[2026-05-04 04:54:39] Starting ATLAS job with PandaID=7122912301
[2026-05-04 04:54:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 07:09:10]  *** The last 200 lines of the pilot log: ***
[2026-05-04 07:09:10] 2026-05-04 05:08:36,609 | INFO     | monitor loop #554: job 0:7122912301 is in state 'finished'
[2026-05-04 07:09:10] 2026-05-04 05:08:36,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,676 | INFO     | job 7122912301 has state=finished
[2026-05-04 07:09:10] 2026-05-04 05:08:36,676 | INFO     | preparing for final server update for job 7122912301 in state='finished'
[2026-05-04 07:09:10] 2026-05-04 05:08:36,676 | INFO     | reading metadata from: /var/lib/boinc/var/slot100/slots/0/PanDA_Pilot-7122912301/jobReport.json
[2026-05-04 07:09:10] 2026-05-04 05:08:36,679 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot100/slots/0/workernode_map.json
[2026-05-04 07:09:10] 2026-05-04 05:08:36,679 | INFO     | this job has now completed (state=finished)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,679 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,679 | INFO     | log transfer has been attempted: DONE
[2026-05-04 07:09:10] 2026-05-04 05:08:36,680 | INFO     | job 7122912301 has finished - writing final server update
[2026-05-04 07:09:10] 2026-05-04 05:08:36,683 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3050777/.job.ad'
[2026-05-04 07:09:10] 2026-05-04 05:08:36,683 | INFO     | total number of processed events: 400 (read)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,710 | INFO     | using path: /var/lib/boinc/var/slot100/slots/0/PanDA_Pilot-7122912301/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,710 | INFO     | extracted standard info from prmon json
[2026-05-04 07:09:10] 2026-05-04 05:08:36,711 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 07:09:10] 2026-05-04 05:08:36,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 07:09:10] 2026-05-04 05:08:36,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 07:09:10] 2026-05-04 05:08:36,714 | INFO     | fitting pss+swap vs Time
[2026-05-04 07:09:10] 2026-05-04 05:08:36,714 | INFO     | sum of square deviations: 697054930.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,714 | INFO     | sum of deviations: 15165653226.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,715 | INFO     | mean x (centered): 0.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,715 | INFO     | mean y: 2319708.2290076334
[2026-05-04 07:09:10] 2026-05-04 05:08:36,715 | INFO     | intersect: 2319708.2290076334
[2026-05-04 07:09:10] 2026-05-04 05:08:36,715 | INFO     | chi2: 1.1223136228155264
[2026-05-04 07:09:10] 2026-05-04 05:08:36,715 | INFO     | sum of square deviations: 620244187.5
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | sum of deviations: 14487341522.000002
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | mean x (centered): 0.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | mean y: 2318360.8571428573
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | intersect: 2318360.8571428573
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | chi2: 1.123393431693111
[2026-05-04 07:09:10] 2026-05-04 05:08:36,716 | INFO     | current chi2=1.123393431693111 (change=-0.09621275690084069 %)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,717 | INFO     | right removable region: 125
[2026-05-04 07:09:10] 2026-05-04 05:08:36,717 | INFO     | sum of square deviations: 620244187.5
[2026-05-04 07:09:10] 2026-05-04 05:08:36,717 | INFO     | sum of deviations: 1698052913.0000002
[2026-05-04 07:09:10] 2026-05-04 05:08:36,717 | INFO     | mean x (centered): 0.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,718 | INFO     | mean y: 2345830.253968254
[2026-05-04 07:09:10] 2026-05-04 05:08:36,718 | INFO     | intersect: 2345830.253968254
[2026-05-04 07:09:10] 2026-05-04 05:08:36,718 | INFO     | chi2: 0.0002854327836627818
[2026-05-04 07:09:10] 2026-05-04 05:08:36,718 | INFO     | current chi2=0.0002854327836627818 (change=99.97456746689515 %)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,718 | INFO     | sum of square deviations: 549294020.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | sum of deviations: 1406656645.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | mean x (centered): 0.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | mean y: 2346455.090909091
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | intersect: 2346455.090909091
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | chi2: 0.0002470930556685594
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | current chi2=0.0002470930556685594 (change=13.432138909284525 %)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,719 | INFO     | left removable region: 10
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | sum of square deviations: 471562330.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | sum of deviations: 1247077350.9999998
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | mean x (centered): 0.0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | mean y: 2346079.086956522
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | intersect: 2346079.086956522
[2026-05-04 07:09:10] 2026-05-04 05:08:36,720 | INFO     | chi2: 0.0002427903826505949
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | current memory leak: 2.64 B/s (using 115 data points, chi2=0.00)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | could have reported an average CPU frequency of 2684 MHz (8 samples)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | ..............................
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | . Timing measurements:
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | . get job = 0 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | . initial setup = 1 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,721 | INFO     | . payload setup = 11 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,722 | INFO     | . stage-in = 0 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,722 | INFO     | . payload execution = 7994 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,722 | INFO     | . stage-out = 1 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,722 | INFO     | . log creation = 0 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,722 | INFO     | ..............................
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | 
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | job summary report
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | --------------------------------------------------
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | PanDA job id: 7122912301
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | task id: 50016797
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | errors: (none)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 07:09:10] 2026-05-04 05:08:36,816 | INFO     | pilot state: finished 
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | transexitcode: 0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | exeerrorcode: 0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | exeerrordiag: 
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | exitcode: 0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | exitmsg: OK
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | cpuconsumptiontime: 30261 s
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | nevents: 400
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | neventsw: 0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | pid: 3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:36,817 | INFO     | pgrp: 3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | corecount: 4
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | event service: False
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | sizes: {0: 2275286, 1: 2277115, 11: 2277115, 8010: 2305178, 8012: 2314200, 8015: 2314578}
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | --------------------------------------------------
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | 
[2026-05-04 07:09:10] 2026-05-04 05:08:36,818 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot100/slots/0
[2026-05-04 07:09:10] 2026-05-04 05:08:36,857 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,860 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 07:09:10] 2026-05-04 05:08:36,860 | INFO     | job 7122912301 has completed (purged errors)
[2026-05-04 07:09:10] 2026-05-04 05:08:36,860 | INFO     | overall cleanup function is called
[2026-05-04 07:09:10] 2026-05-04 05:08:37,868 | INFO     | --- collectZombieJob: --- 10, [3159588]
[2026-05-04 07:09:10] 2026-05-04 05:08:37,869 | INFO     | zombie collector waiting for pid 3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:37,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 07:09:10] 2026-05-04 05:08:37,869 | INFO     | collected zombie processes
[2026-05-04 07:09:10] 2026-05-04 05:08:37,869 | INFO     | will attempt to kill all subprocesses of pid=3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:38,584 | INFO     | process IDs to be killed: [3159588] (in reverse order)
[2026-05-04 07:09:10] 2026-05-04 05:08:38,957 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 07:09:10] 2026-05-04 05:08:38,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 07:09:10] 2026-05-04 05:08:38,991 | INFO     | did not find any defunct processes belonging to 3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:39,015 | INFO     | did not find any defunct processes belonging to 3159588
[2026-05-04 07:09:10] 2026-05-04 05:08:39,016 | INFO     | Ready for new job
[2026-05-04 07:09:10] 2026-05-04 05:08:39,017 | INFO     | ***************************************
[2026-05-04 07:09:10] 2026-05-04 05:08:39,018 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 07:09:10] 2026-05-04 05:08:39,018 | INFO     | ***************************************
[2026-05-04 07:09:10] 2026-05-04 05:08:39,018 | INFO     | 
[2026-05-04 07:09:10] 2026-05-04 05:08:39,026 | INFO     | architecture information:
[2026-05-04 07:09:10] 2026-05-04 05:08:39,026 | INFO     | executing command: cat /etc/os-release
[2026-05-04 07:09:10] 2026-05-04 05:08:39,048 | INFO     | cat /etc/os-release:
[2026-05-04 07:09:10] NAME="CentOS Linux"
[2026-05-04 07:09:10] VERSION="7 (Core)"
[2026-05-04 07:09:10] ID="centos"
[2026-05-04 07:09:10] ID_LIKE="rhel fedora"
[2026-05-04 07:09:10] VERSION_ID="7"
[2026-05-04 07:09:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 07:09:10] ANSI_COLOR="0;31"
[2026-05-04 07:09:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 07:09:10] HOME_URL="https://www.centos.org/"
[2026-05-04 07:09:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 07:09:10] 
[2026-05-04 07:09:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 07:09:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 07:09:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 07:09:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 07:09:10] 
[2026-05-04 07:09:10] 2026-05-04 05:08:39,048 | INFO     | ***************************************
[2026-05-04 07:09:10] 2026-05-04 05:08:39,551 | INFO     | executing command: df -mP /var/lib/boinc/var/slot100/slots/0
[2026-05-04 07:09:10] 2026-05-04 05:08:39,577 | INFO     | sufficient remaining disk space (232208203776 B)
[2026-05-04 07:09:10] 2026-05-04 05:08:39,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 07:09:10] 2026-05-04 05:08:39,577 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 07:09:10] 2026-05-04 05:08:39,578 | INFO     | update_server=False
[2026-05-04 07:09:10] 2026-05-04 05:08:39,578 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 07:09:10] 2026-05-04 05:08:39,836 | INFO     | all payload control threads have been joined
[2026-05-04 07:09:10] 2026-05-04 05:08:39,927 | INFO     | all data control threads have been joined
[2026-05-04 07:09:10] 2026-05-04 05:08:39,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 07:09:10] 2026-05-04 05:08:40,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 07:09:10] 2026-05-04 05:08:40,124 | INFO     | aborting loop
[2026-05-04 07:09:10] 2026-05-04 05:08:40,583 | INFO     | [job] retrieve thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,618 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,805 | INFO     | [payload] failed_post thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,841 | INFO     | [payload] control thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,917 | INFO     | [data] copytool_in thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,932 | INFO     | [data] control thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:40,959 | INFO     | [payload] validate_post thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:41,028 | INFO     | all job control threads have been joined
[2026-05-04 07:09:10] 2026-05-04 05:08:41,128 | INFO     | [job] job monitor thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:41,762 | INFO     | [job] validate thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:41,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 07:09:10] 2026-05-04 05:08:41,901 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:41,922 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:42,003 | INFO     | [data] copytool_out thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:42,033 | INFO     | [job] control thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:42,685 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 07:09:10] 2026-05-04 05:08:42,830 | INFO     | [job] queue monitor thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:46,691 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:08:50,239 | INFO     | job.realtimelogging is not enabled
[2026-05-04 07:09:10] 2026-05-04 05:08:51,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 07:09:10] 2026-05-04 05:09:04,066 | INFO     | [monitor] cgroup control has ended
[2026-05-04 07:09:10] 2026-05-04 05:09:04,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22999577507648)>', '<ExcThread(monitor, started 22999273027328)>']
[2026-05-04 07:09:10] 2026-05-04 05:09:09,481 | INFO     | PID=3142452 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-04 07:09:10] 2026-05-04 05:09:09,481 | INFO     | .. there are 25 such processes running
[2026-05-04 07:09:10] 2026-05-04 05:09:09,483 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 07:09:10] 2026-05-04 05:09:09,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 07:09:10] 2026-05-04 05:09:09,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 07:09:10] 2026-05-04 05:09:09,484 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 07:09:10] 2026-05-04 05:09:09,484 | INFO     | [monitor] control thread has ended
[2026-05-04 07:09:10] 2026-05-04 05:09:09,488 | INFO     | all workflow threads have been joined
[2026-05-04 07:09:10] 2026-05-04 05:09:09,489 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 07:09:10] 2026-05-04 05:09:09,489 | INFO     | traces error code: 0
[2026-05-04 07:09:10] 2026-05-04 05:09:09,489 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 07:09:10] 2026-05-04 05:09:09,667 [wrapper] ==== pilot stdout END ====
[2026-05-04 07:09:10] 2026-05-04 05:09:09,671 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 07:09:10] 2026-05-04 05:09:09,674 [wrapper] pilotpid: 3142452
[2026-05-04 07:09:10] 2026-05-04 05:09:09,678 [wrapper] Pilot exit status: 0
[2026-05-04 07:09:10] 2026-05-04 05:09:09,694 [wrapper] pandaids: 7122912301 7122912301
[2026-05-04 07:09:10] 2026-05-04 05:09:09,898 [wrapper] cleanup supervisor_pilot 3426061 3142453
[2026-05-04 07:09:10] 2026-05-04 05:09:09,903 [wrapper] Test setup, not cleaning
[2026-05-04 07:09:10] 2026-05-04 05:09:09,910 [wrapper] apfmon messages muted
[2026-05-04 07:09:10] 2026-05-04 05:09:09,915 [wrapper] ==== wrapper stdout END ====
[2026-05-04 07:09:10] 2026-05-04 05:09:09,918 [wrapper] ==== wrapper stderr END ====
[2026-05-04 07:09:10]  *** Error codes and diagnostics ***
[2026-05-04 07:09:10]     "exeErrorCode": 0,
[2026-05-04 07:09:10]     "pilotErrorCode": 0,
[2026-05-04 07:09:10]  *** Listing of results directory ***
[2026-05-04 07:09:10] total 771000
[2026-05-04 07:09:10] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc    683926 Apr 30 20:30 pilot3.tar.gz
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc      5631 Apr 30 21:04 queuedata.json
[2026-05-04 07:09:10] -rwx------. 1 boinc boinc     36322 Apr 30 21:04 runpilot2-wrapper.sh
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc       100 May  4 04:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 07:09:10] -rwxr-xr-x. 1 boinc boinc      7986 May  4 04:33 run_atlas
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc       105 May  4 04:33 job.xml
[2026-05-04 07:09:10] -rw-r--r--. 3 boinc boinc 313269007 May  4 04:33 EVNT.50016792._000048.pool.root.1
[2026-05-04 07:09:10] -rw-r--r--. 3 boinc boinc 313269007 May  4 04:33 ATLAS.root_0
[2026-05-04 07:09:10] -rw-r--r--. 2 boinc boinc     15667 May  4 04:33 start_atlas.sh
[2026-05-04 07:09:10] drwxrwx--x. 2 boinc boinc      4096 May  4 04:33 shared
[2026-05-04 07:09:10] -rw-r--r--. 2 boinc boinc    697398 May  4 04:33 input.tar.gz
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc         0 May  4 04:33 boinc_lockfile
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc   1508687 May  4 04:33 agis_ddmendpoints.agis.ALL.json
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc      2517 May  4 04:54 pandaJob.out
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc   1003025 May  4 04:54 agis_schedconf.cvmfs.json
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc       441 May  4 04:54 workernode_map.json
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc      6549 May  4 05:34 init_data.xml
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc       488 May  4 07:08 boinc_task_state.xml
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc 156769879 May  4 07:08 HITS.50016797._001179.pool.root.1
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc      1027 May  4 07:08 memory_monitor_summary.json
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc    266480 May  4 07:08 log.50016797._001179.job.log.tgz.1
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc      6360 May  4 07:08 heartbeat_new.json
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc      6251 May  4 07:08 heartbeat.json
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc      8192 May  4 07:09 boinc_mmap_file
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc        27 May  4 07:09 wrapper_checkpoint.txt
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc        96 May  4 07:09 pilot_heartbeat.json
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc      4907 May  4 07:09 pilotlog.txt
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc    760083 May  4 07:09 log.50016797._001179.job.log.1
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc       357 May  4 07:09 output.list
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc       410 May  4 07:09 runtime_log
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc   1044480 May  4 07:09 result.tar.gz
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc      8921 May  4 07:09 runtime_log.err
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc       788 May  4 07:09 a7d0e6282112.diag
[2026-05-04 07:09:10] -rw-r--r--. 1 boinc boinc     22970 May  4 07:09 stderr.txt
[2026-05-04 07:09:10] HITS file was successfully produced:
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc 156769879 May  4 07:08 shared/HITS.pool.root.1
[2026-05-04 07:09:10]  *** Contents of shared directory: ***
[2026-05-04 07:09:10] total 460752
[2026-05-04 07:09:10] -rw-r--r--. 3 boinc boinc 313269007 May  4 04:33 ATLAS.root_0
[2026-05-04 07:09:10] -rw-r--r--. 2 boinc boinc     15667 May  4 04:33 start_atlas.sh
[2026-05-04 07:09:10] -rw-r--r--. 2 boinc boinc    697398 May  4 04:33 input.tar.gz
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc 156769879 May  4 07:08 HITS.pool.root.1
[2026-05-04 07:09:10] -rw-------. 1 boinc boinc   1044480 May  4 07:09 result.tar.gz
07:09:11 (3125412): run_atlas exited; CPU time 30696.734052
07:09:11 (3125412): called boinc_finish(0)

</stderr_txt>
]]>

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