Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:18:21 (208618): wrapper (7.7.26015): starting
13:18:21 (208618): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 13:18:21] Arguments: --nthreads 4
[2026-05-01 13:18:21] Threads: 4
[2026-05-01 13:18:21] Checking for CVMFS
[2026-05-01 13:18:21] No cvmfs_config command found, will try listing directly
[2026-05-01 13:18:21] CVMFS is ok
[2026-05-01 13:18:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 13:18:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 13:18:21] Further information can be found at the LHC@home message board.
[2026-05-01 13:18:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 13:18:21] Checking for apptainer binary...
[2026-05-01 13:18:21] which: no apptainer in ((null))
[2026-05-01 13:18:21] apptainer is not installed, using version from CVMFS
[2026-05-01 13:18:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 13:18:22] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/27/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-01 13:18:22] apptainer works
[2026-05-01 13:18:22] Set ATHENA_PROC_NUMBER=4
[2026-05-01 13:18:22] Set ATHENA_CORE_NUMBER=4
[2026-05-01 13:18:23] Starting ATLAS job with PandaID=7122911853
[2026-05-01 13:18:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 15:54:36]  *** The last 200 lines of the pilot log: ***
[2026-05-01 15:54:36] 2026-05-01 13:53:59,778 | INFO     | this job has now completed (state=finished)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,778 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,779 | INFO     | log transfer has been attempted: DONE
[2026-05-01 15:54:36] 2026-05-01 13:53:59,779 | INFO     | job 7122911853 has finished - writing final server update
[2026-05-01 15:54:36] 2026-05-01 13:53:59,779 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3758721/.job.ad'
[2026-05-01 15:54:36] 2026-05-01 13:53:59,779 | INFO     | total number of processed events: 400 (read)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,804 | INFO     | using path: /var/lib/boinc/var/slot36/slots/27/PanDA_Pilot-7122911853/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,804 | INFO     | extracted standard info from prmon json
[2026-05-01 15:54:36] 2026-05-01 13:53:59,804 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 15:54:36] 2026-05-01 13:53:59,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 15:54:36] 2026-05-01 13:53:59,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 15:54:36] 2026-05-01 13:53:59,808 | INFO     | fitting pss+swap vs Time
[2026-05-01 15:54:36] 2026-05-01 13:53:59,808 | INFO     | sum of square deviations: 1088905998.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,809 | INFO     | sum of deviations: 1825430734.0000038
[2026-05-01 15:54:36] 2026-05-01 13:53:59,809 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,809 | INFO     | mean y: 2319390.302631579
[2026-05-01 15:54:36] 2026-05-01 13:53:59,809 | INFO     | intersect: 2319390.302631579
[2026-05-01 15:54:36] 2026-05-01 13:53:59,809 | INFO     | chi2: 2.1737201845344662
[2026-05-01 15:54:36] 2026-05-01 13:53:59,810 | INFO     | sum of square deviations: 984941258.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,810 | INFO     | sum of deviations: 11559934686.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | mean y: 2333281.5578231295
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | intersect: 2333281.5578231295
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | chi2: 1.3116438910972161
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | current chi2=1.3116438910972161 (change=39.659027853296415 %)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,811 | INFO     | sum of square deviations: 887813855.5
[2026-05-01 15:54:36] 2026-05-01 13:53:59,812 | INFO     | sum of deviations: 11186301084.999998
[2026-05-01 15:54:36] 2026-05-01 13:53:59,812 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,812 | INFO     | mean y: 2332694.6338028167
[2026-05-01 15:54:36] 2026-05-01 13:53:59,812 | INFO     | intersect: 2332694.6338028167
[2026-05-01 15:54:36] 2026-05-01 13:53:59,813 | INFO     | chi2: 1.31310831695806
[2026-05-01 15:54:36] 2026-05-01 13:53:59,813 | INFO     | current chi2=1.31310831695806 (change=-0.11164812879346471 %)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,813 | INFO     | right removable region: 141
[2026-05-01 15:54:36] 2026-05-01 13:53:59,813 | INFO     | sum of square deviations: 984941258.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,814 | INFO     | sum of deviations: -15669771500.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,814 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,814 | INFO     | mean y: 2344540.829931973
[2026-05-01 15:54:36] 2026-05-01 13:53:59,814 | INFO     | intersect: 2344540.829931973
[2026-05-01 15:54:36] 2026-05-01 13:53:59,815 | INFO     | chi2: 0.8976945421984437
[2026-05-01 15:54:36] 2026-05-01 13:53:59,815 | INFO     | current chi2=0.8976945421984437 (change=58.7023873364502 %)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,815 | INFO     | sum of square deviations: 887813855.5
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | sum of deviations: -13635377214.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | mean y: 2341345.0422535213
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | intersect: 2341345.0422535213
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | chi2: 0.8959963120110567
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | current chi2=0.8959963120110567 (change=0.18917684218376457 %)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,816 | INFO     | left removable region: 10
[2026-05-01 15:54:36] 2026-05-01 13:53:59,817 | INFO     | sum of square deviations: 697054930.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,817 | INFO     | sum of deviations: -3870345019.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,817 | INFO     | mean x (centered): 0.0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | mean y: 2357376.473282443
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | intersect: 2357376.473282443
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | chi2: 0.003079339669121196
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | current memory leak: -5.55 B/s (using 131 data points, chi2=0.00)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | could have reported an average CPU frequency of 2668 MHz (9 samples)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,818 | INFO     | ..............................
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . Timing measurements:
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . get job = 0 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . initial setup = 15 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . payload setup = 20 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . stage-in = 0 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . payload execution = 9246 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . stage-out = 0 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | . log creation = 0 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,819 | INFO     | ..............................
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | 
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | job summary report
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | --------------------------------------------------
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | PanDA job id: 7122911853
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | task id: 50016825
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | errors: (none)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,917 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | pilot state: finished 
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | transexitcode: 0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | exeerrorcode: 0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | exeerrordiag: 
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | exitcode: 0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | exitmsg: OK
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | cpuconsumptiontime: 34801 s
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | nevents: 400
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | neventsw: 0
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | pid: 218569
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | pgrp: 218569
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | corecount: 4
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | event service: False
[2026-05-01 15:54:36] 2026-05-01 13:53:59,918 | INFO     | sizes: {0: 2274617, 1: 2277115, 12: 2277115, 9270: 2305843, 9273: 2315123}
[2026-05-01 15:54:36] 2026-05-01 13:53:59,919 | INFO     | --------------------------------------------------
[2026-05-01 15:54:36] 2026-05-01 13:53:59,919 | INFO     | 
[2026-05-01 15:54:36] 2026-05-01 13:53:59,919 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/27
[2026-05-01 15:54:36] 2026-05-01 13:53:59,953 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,953 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | job 7122911853 has completed (purged errors)
[2026-05-01 15:54:36] 2026-05-01 13:53:59,955 | INFO     | overall cleanup function is called
[2026-05-01 15:54:36] 2026-05-01 13:54:00,964 | INFO     | --- collectZombieJob: --- 10, [218569]
[2026-05-01 15:54:36] 2026-05-01 13:54:00,964 | INFO     | zombie collector waiting for pid 218569
[2026-05-01 15:54:36] 2026-05-01 13:54:00,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 15:54:36] 2026-05-01 13:54:00,964 | INFO     | collected zombie processes
[2026-05-01 15:54:36] 2026-05-01 13:54:00,964 | INFO     | will attempt to kill all subprocesses of pid=218569
[2026-05-01 15:54:36] 2026-05-01 13:54:01,660 | INFO     | process IDs to be killed: [218569] (in reverse order)
[2026-05-01 15:54:36] 2026-05-01 13:54:02,038 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 15:54:36] 2026-05-01 13:54:02,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 15:54:36] 2026-05-01 13:54:02,069 | INFO     | did not find any defunct processes belonging to 218569
[2026-05-01 15:54:36] 2026-05-01 13:54:02,096 | INFO     | did not find any defunct processes belonging to 218569
[2026-05-01 15:54:36] 2026-05-01 13:54:02,097 | INFO     | Ready for new job
[2026-05-01 15:54:36] 2026-05-01 13:54:02,099 | INFO     | ***************************************
[2026-05-01 15:54:36] 2026-05-01 13:54:02,099 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 15:54:36] 2026-05-01 13:54:02,099 | INFO     | ***************************************
[2026-05-01 15:54:36] 2026-05-01 13:54:02,099 | INFO     | 
[2026-05-01 15:54:36] 2026-05-01 13:54:02,108 | INFO     | architecture information:
[2026-05-01 15:54:36] 2026-05-01 13:54:02,108 | INFO     | executing command: cat /etc/os-release
[2026-05-01 15:54:36] 2026-05-01 13:54:02,136 | INFO     | cat /etc/os-release:
[2026-05-01 15:54:36] NAME="CentOS Linux"
[2026-05-01 15:54:36] VERSION="7 (Core)"
[2026-05-01 15:54:36] ID="centos"
[2026-05-01 15:54:36] ID_LIKE="rhel fedora"
[2026-05-01 15:54:36] VERSION_ID="7"
[2026-05-01 15:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 15:54:36] ANSI_COLOR="0;31"
[2026-05-01 15:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 15:54:36] HOME_URL="https://www.centos.org/"
[2026-05-01 15:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 15:54:36] 
[2026-05-01 15:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 15:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 15:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 15:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 15:54:36] 
[2026-05-01 15:54:36] 2026-05-01 13:54:02,136 | INFO     | ***************************************
[2026-05-01 15:54:36] 2026-05-01 13:54:02,639 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/27
[2026-05-01 15:54:36] 2026-05-01 13:54:02,670 | INFO     | sufficient remaining disk space (117572632576 B)
[2026-05-01 15:54:36] 2026-05-01 13:54:02,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 15:54:36] 2026-05-01 13:54:02,671 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 15:54:36] 2026-05-01 13:54:02,671 | INFO     | update_server=False
[2026-05-01 15:54:36] 2026-05-01 13:54:02,671 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 15:54:36] 2026-05-01 13:54:02,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:54:36] 2026-05-01 13:54:02,672 | INFO     | aborting loop
[2026-05-01 15:54:36] 2026-05-01 13:54:02,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 15:54:36] 2026-05-01 13:54:02,722 | INFO     | all data control threads have been joined
[2026-05-01 15:54:36] 2026-05-01 13:54:02,910 | INFO     | all payload control threads have been joined
[2026-05-01 15:54:36] 2026-05-01 13:54:03,311 | INFO     | all job control threads have been joined
[2026-05-01 15:54:36] 2026-05-01 13:54:03,676 | INFO     | [job] retrieve thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,678 | INFO     | [job] job monitor thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,728 | INFO     | [data] control thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,755 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,790 | INFO     | [data] copytool_in thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,915 | INFO     | [payload] control thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:03,970 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,094 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,212 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,319 | INFO     | [job] control thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,369 | INFO     | [job] validate thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,600 | INFO     | [payload] validate_post thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,678 | INFO     | [data] copytool_out thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:04,928 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 15:54:36] 2026-05-01 13:54:05,095 | INFO     | [payload] failed_post thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:05,632 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 15:54:36] 2026-05-01 13:54:05,933 | INFO     | [job] queue monitor thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:09,638 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 15:54:36] 2026-05-01 13:54:30,294 | INFO     | [monitor] cgroup control has ended
[2026-05-01 15:54:36] 2026-05-01 13:54:30,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23197585028928)>', '<ExcThread(monitor, started 23197333571328)>']
[2026-05-01 15:54:36] 2026-05-01 13:54:32,759 | INFO     | PID=213124 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 15:54:36] 2026-05-01 13:54:32,759 | INFO     | .. there are 27 such processes running
[2026-05-01 15:54:36] 2026-05-01 13:54:32,760 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 15:54:36] 2026-05-01 13:54:32,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 15:54:36] 2026-05-01 13:54:32,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 15:54:36] 2026-05-01 13:54:32,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 15:54:36] 2026-05-01 13:54:32,760 | INFO     | [monitor] control thread has ended
[2026-05-01 15:54:36] 2026-05-01 13:54:35,971 | INFO     | all workflow threads have been joined
[2026-05-01 15:54:36] 2026-05-01 13:54:35,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 15:54:36] 2026-05-01 13:54:35,971 | INFO     | traces error code: 0
[2026-05-01 15:54:36] 2026-05-01 13:54:35,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 15:54:36] 2026-05-01 13:54:36,200 [wrapper] ==== pilot stdout END ====
[2026-05-01 15:54:36] 2026-05-01 13:54:36,205 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 15:54:36] 2026-05-01 13:54:36,209 [wrapper] pilotpid: 213124
[2026-05-01 15:54:36] 2026-05-01 13:54:36,213 [wrapper] Pilot exit status: 0
[2026-05-01 15:54:36] 2026-05-01 13:54:36,230 [wrapper] pandaids: 7122911853
[2026-05-01 15:54:36] 2026-05-01 13:54:36,432 [wrapper] cleanup supervisor_pilot  620058 213125
[2026-05-01 15:54:36] 2026-05-01 13:54:36,436 [wrapper] Test setup, not cleaning
[2026-05-01 15:54:36] 2026-05-01 13:54:36,440 [wrapper] apfmon messages muted
[2026-05-01 15:54:36] 2026-05-01 13:54:36,444 [wrapper] ==== wrapper stdout END ====
[2026-05-01 15:54:36] 2026-05-01 13:54:36,449 [wrapper] ==== wrapper stderr END ====
[2026-05-01 15:54:36]  *** Error codes and diagnostics ***
[2026-05-01 15:54:36]     "exeErrorCode": 0,
[2026-05-01 15:54:36]     "pilotErrorCode": 0,
[2026-05-01 15:54:36]  *** Listing of results directory ***
[2026-05-01 15:54:36] total 475132
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc    683926 Apr 30 20:30 pilot3.tar.gz
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc      5631 Apr 30 21:04 queuedata.json
[2026-05-01 15:54:36] -rwx------. 1 boinc boinc     36322 Apr 30 21:04 runpilot2-wrapper.sh
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc       100 May  1 13:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 15:54:36] -rwxr-xr-x. 1 boinc boinc      7986 May  1 13:18 run_atlas
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc       105 May  1 13:18 job.xml
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc      6540 May  1 13:18 init_data.xml
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc 311400015 May  1 13:18 EVNT.50016821._000021.pool.root.1
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc     15667 May  1 13:18 start_atlas.sh
[2026-05-01 15:54:36] drwxrwx--x. 2 boinc boinc      4096 May  1 13:18 shared
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc    697400 May  1 13:18 input.tar.gz
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc         0 May  1 13:18 boinc_lockfile
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc      2519 May  1 13:18 pandaJob.out
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc   1003015 May  1 13:19 agis_schedconf.cvmfs.json
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc   1508687 May  1 13:19 agis_ddmendpoints.agis.ALL.json
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc       443 May  1 13:19 workernode_map.json
[2026-05-01 15:54:36] drwx------. 5 boinc boinc      4096 May  1 13:19 pilot3
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc 168672676 May  1 15:53 HITS.50016825._000510.pool.root.1
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc       488 May  1 15:53 boinc_task_state.xml
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc        95 May  1 15:53 pilot_heartbeat.json
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc      1039 May  1 15:53 memory_monitor_summary.json
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc    287343 May  1 15:53 log.50016825._000510.job.log.tgz.1
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc      6363 May  1 15:53 heartbeat_new.json
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc      6254 May  1 15:53 heartbeat.json
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc        27 May  1 15:54 wrapper_checkpoint.txt
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc      8192 May  1 15:54 boinc_mmap_file
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc      4833 May  1 15:54 pilotlog.txt
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc    875334 May  1 15:54 log.50016825._000510.job.log.1
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc       357 May  1 15:54 output.list
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc       410 May  1 15:54 runtime_log
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc   1177600 May  1 15:54 result.tar.gz
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc      8844 May  1 15:54 runtime_log.err
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc       663 May  1 15:54 a7d07525126c.diag
[2026-05-01 15:54:36] -rw-r--r--. 1 boinc boinc     20782 May  1 15:54 stderr.txt
[2026-05-01 15:54:36] HITS file was successfully produced:
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc 168672676 May  1 15:53 shared/HITS.pool.root.1
[2026-05-01 15:54:36]  *** Contents of shared directory: ***
[2026-05-01 15:54:36] total 470684
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc 311400015 May  1 13:18 ATLAS.root_0
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc     15667 May  1 13:18 start_atlas.sh
[2026-05-01 15:54:36] -rw-r--r--. 2 boinc boinc    697400 May  1 13:18 input.tar.gz
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc 168672676 May  1 15:53 HITS.pool.root.1
[2026-05-01 15:54:36] -rw-------. 1 boinc boinc   1177600 May  1 15:54 result.tar.gz
15:54:38 (208618): run_atlas exited; CPU time 35270.651145
15:54:38 (208618): called boinc_finish(0)

</stderr_txt>
]]>

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