Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:20:09 (3731215): wrapper (7.7.26015): starting
09:20:09 (3731215): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 09:20:09] Arguments: --nthreads 4
[2026-05-01 09:20:09] Threads: 4
[2026-05-01 09:20:09] Checking for CVMFS
[2026-05-01 09:20:09] No cvmfs_config command found, will try listing directly
[2026-05-01 09:20:09] CVMFS is ok
[2026-05-01 09:20:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 09:20:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 09:20:09] Further information can be found at the LHC@home message board.
[2026-05-01 09:20:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 09:20:09] Checking for apptainer binary...
[2026-05-01 09:20:09] which: no apptainer in ((null))
[2026-05-01 09:20:09] apptainer is not installed, using version from CVMFS
[2026-05-01 09:20:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 09:20:09] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/15/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-05-01 09:20:09] apptainer works
[2026-05-01 09:20:09] Set ATHENA_PROC_NUMBER=4
[2026-05-01 09:20:09] Set ATHENA_CORE_NUMBER=4
[2026-05-01 09:20:09] Starting ATLAS job with PandaID=7122911482
[2026-05-01 09:20:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 12:02:45]  *** The last 200 lines of the pilot log: ***
[2026-05-01 12:02:45] 2026-05-01 10:01:44,699 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,699 | INFO     | mean y: 2315856.867924528
[2026-05-01 12:02:45] 2026-05-01 10:01:44,699 | INFO     | intersect: 2315856.867924528
[2026-05-01 12:02:45] 2026-05-01 10:01:44,699 | INFO     | chi2: 2.2061353121715648
[2026-05-01 12:02:45] 2026-05-01 10:01:44,700 | INFO     | sum of square deviations: 1132458442.5
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | sum of deviations: 18922776663.500004
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | mean y: 2328227.7077922076
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | intersect: 2328227.7077922076
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | chi2: 1.4247210234277792
[2026-05-01 12:02:45] 2026-05-01 10:01:44,701 | INFO     | current chi2=1.4247210234277792 (change=35.42005263378955 %)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,702 | INFO     | sum of square deviations: 1025693650.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,702 | INFO     | sum of deviations: 18322549565.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,702 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,702 | INFO     | mean y: 2327370.053691275
[2026-05-01 12:02:45] 2026-05-01 10:01:44,703 | INFO     | intersect: 2327370.053691275
[2026-05-01 12:02:45] 2026-05-01 10:01:44,703 | INFO     | chi2: 1.4260148779451924
[2026-05-01 12:02:45] 2026-05-01 10:01:44,703 | INFO     | current chi2=1.4260148779451924 (change=-0.09081458728673342 %)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,703 | INFO     | right removable region: 148
[2026-05-01 12:02:45] 2026-05-01 10:01:44,703 | INFO     | sum of square deviations: 1132458442.5
[2026-05-01 12:02:45] 2026-05-01 10:01:44,704 | INFO     | sum of deviations: -12729586262.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,704 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,704 | INFO     | mean y: 2345093.961038961
[2026-05-01 12:02:45] 2026-05-01 10:01:44,704 | INFO     | intersect: 2345093.961038961
[2026-05-01 12:02:45] 2026-05-01 10:01:44,705 | INFO     | chi2: 0.8161756941144225
[2026-05-01 12:02:45] 2026-05-01 10:01:44,705 | INFO     | current chi2=0.8161756941144225 (change=63.00427767909501 %)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,705 | INFO     | sum of square deviations: 1025693650.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | sum of deviations: -13303611816.999998
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | mean y: 2345886.0067114094
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | intersect: 2345886.0067114094
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | chi2: 0.8110824701219111
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | current chi2=0.8110824701219111 (change=0.6240352450139607 %)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,706 | INFO     | left removable region: 10
[2026-05-01 12:02:45] 2026-05-01 10:01:44,707 | INFO     | sum of square deviations: 814878534.5
[2026-05-01 12:02:45] 2026-05-01 10:01:44,707 | INFO     | sum of deviations: -3540169952.9999995
[2026-05-01 12:02:45] 2026-05-01 10:01:44,707 | INFO     | mean x (centered): 0.0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,708 | INFO     | mean y: 2360435.5362318843
[2026-05-01 12:02:45] 2026-05-01 10:01:44,708 | INFO     | intersect: 2360435.5362318843
[2026-05-01 12:02:45] 2026-05-01 10:01:44,708 | INFO     | chi2: 0.0037642764867450783
[2026-05-01 12:02:45] 2026-05-01 10:01:44,708 | INFO     | current memory leak: -4.34 B/s (using 138 data points, chi2=0.00)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,708 | INFO     | could have reported an average CPU frequency of 2769 MHz (9 samples)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | ..............................
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . Timing measurements:
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . get job = 0 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . initial setup = 5 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . payload setup = 9 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . stage-in = 0 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . payload execution = 9653 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . stage-out = 0 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | . log creation = 0 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,709 | INFO     | ..............................
[2026-05-01 12:02:45] 2026-05-01 10:01:44,798 | INFO     | 
[2026-05-01 12:02:45] 2026-05-01 10:01:44,798 | INFO     | job summary report
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | --------------------------------------------------
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | PanDA job id: 7122911482
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | task id: 50016766
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | errors: (none)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | pilot state: finished 
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | transexitcode: 0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | exeerrorcode: 0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | exeerrordiag: 
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | exitcode: 0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | exitmsg: OK
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | cpuconsumptiontime: 35775 s
[2026-05-01 12:02:45] 2026-05-01 10:01:44,799 | INFO     | nevents: 400
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | neventsw: 0
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | pid: 3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | pgrp: 3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | corecount: 4
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | event service: False
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | sizes: {0: 2276548, 1: 2278377, 11: 2278377, 9667: 2306722, 9669: 2315744, 9670: 2315800, 9671: 2316186}
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | --------------------------------------------------
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | 
[2026-05-01 12:02:45] 2026-05-01 10:01:44,800 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/15
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,821 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,822 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,823 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,823 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 12:02:45] 2026-05-01 10:01:44,823 | INFO     | job 7122911482 has completed (purged errors)
[2026-05-01 12:02:45] 2026-05-01 10:01:44,823 | INFO     | overall cleanup function is called
[2026-05-01 12:02:45] 2026-05-01 10:01:45,830 | INFO     | --- collectZombieJob: --- 10, [3742414]
[2026-05-01 12:02:45] 2026-05-01 10:01:45,830 | INFO     | zombie collector waiting for pid 3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:45,830 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 12:02:45] 2026-05-01 10:01:45,830 | INFO     | collected zombie processes
[2026-05-01 12:02:45] 2026-05-01 10:01:45,830 | INFO     | will attempt to kill all subprocesses of pid=3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:46,107 | INFO     | process IDs to be killed: [3742414] (in reverse order)
[2026-05-01 12:02:45] 2026-05-01 10:01:46,231 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 12:02:45] 2026-05-01 10:01:46,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 12:02:45] 2026-05-01 10:01:46,243 | INFO     | did not find any defunct processes belonging to 3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:46,253 | INFO     | did not find any defunct processes belonging to 3742414
[2026-05-01 12:02:45] 2026-05-01 10:01:46,253 | INFO     | Ready for new job
[2026-05-01 12:02:45] 2026-05-01 10:01:46,255 | INFO     | ***************************************
[2026-05-01 12:02:45] 2026-05-01 10:01:46,255 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 12:02:45] 2026-05-01 10:01:46,255 | INFO     | ***************************************
[2026-05-01 12:02:45] 2026-05-01 10:01:46,255 | INFO     | 
[2026-05-01 12:02:45] 2026-05-01 10:01:46,259 | INFO     | architecture information:
[2026-05-01 12:02:45] 2026-05-01 10:01:46,259 | INFO     | executing command: cat /etc/os-release
[2026-05-01 12:02:45] 2026-05-01 10:01:46,273 | INFO     | cat /etc/os-release:
[2026-05-01 12:02:45] NAME="CentOS Linux"
[2026-05-01 12:02:45] VERSION="7 (Core)"
[2026-05-01 12:02:45] ID="centos"
[2026-05-01 12:02:45] ID_LIKE="rhel fedora"
[2026-05-01 12:02:45] VERSION_ID="7"
[2026-05-01 12:02:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 12:02:45] ANSI_COLOR="0;31"
[2026-05-01 12:02:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 12:02:45] HOME_URL="https://www.centos.org/"
[2026-05-01 12:02:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 12:02:45] 
[2026-05-01 12:02:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 12:02:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 12:02:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 12:02:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 12:02:45] 
[2026-05-01 12:02:45] 2026-05-01 10:01:46,273 | INFO     | ***************************************
[2026-05-01 12:02:45] 2026-05-01 10:01:46,776 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/15
[2026-05-01 12:02:45] 2026-05-01 10:01:46,792 | INFO     | sufficient remaining disk space (32372686848 B)
[2026-05-01 12:02:45] 2026-05-01 10:01:46,793 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 12:02:45] 2026-05-01 10:01:46,793 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 12:02:45] 2026-05-01 10:01:46,793 | INFO     | update_server=False
[2026-05-01 12:02:45] 2026-05-01 10:01:46,793 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 12:02:45] 2026-05-01 10:01:46,793 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 12:02:45] 2026-05-01 10:01:46,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 12:02:45] 2026-05-01 10:01:46,940 | WARNING  | process 3742414 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 12:02:45] 2026-05-01 10:01:47,186 | INFO     | using path: /var/lib/boinc/var/slot12/slots/15/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 12:02:45] 2026-05-01 10:01:47,187 | INFO     | using path: /var/lib/boinc/var/slot12/slots/15/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 12:02:45] 2026-05-01 10:01:47,187 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-05-01 12:02:45] 2026-05-01 10:01:47,187 | WARNING  | maxPSS not found in memory monitor output
[2026-05-01 12:02:45] 2026-05-01 10:01:47,188 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot12/slots/15/PanDA_Pilot-7122911482/payload.stdout) since it has not been created yet
[2026-05-01 12:02:45] 2026-05-01 10:01:47,188 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/15
[2026-05-01 12:02:45] 2026-05-01 10:01:47,207 | INFO     | sufficient remaining disk space (32372686848 B)
[2026-05-01 12:02:45] 2026-05-01 10:01:47,207 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-05-01 12:02:45] 2026-05-01 10:01:47,208 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot12/slots/15/PanDA_Pilot-7122911482/HITS.50016766._001302.pool.root.1 since it does not exist
[2026-05-01 12:02:45] 2026-05-01 10:01:47,329 | INFO     | all payload control threads have been joined
[2026-05-01 12:02:45] 2026-05-01 10:01:47,385 | INFO     | all data control threads have been joined
[2026-05-01 12:02:45] 2026-05-01 10:01:47,469 | INFO     | number of running child processes to parent process 3742414: 1
[2026-05-01 12:02:45] 2026-05-01 10:01:47,469 | INFO     | maximum number of monitored processes: 6
[2026-05-01 12:02:45] 2026-05-01 10:01:47,469 | INFO     | aborting job monitoring since job object (job id=7122911482) has expired
[2026-05-01 12:02:45] 2026-05-01 10:01:47,470 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 12:02:45] 2026-05-01 10:01:47,470 | INFO     | will abort loop
[2026-05-01 12:02:45] 2026-05-01 10:01:47,798 | INFO     | [job] retrieve thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:47,799 | INFO     | [job] queue monitor thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:47,829 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,176 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,328 | INFO     | [payload] validate_post thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,334 | INFO     | [payload] control thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,379 | INFO     | [data] copytool_in thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,391 | INFO     | [data] control thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,475 | INFO     | [job] job monitor thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,479 | INFO     | all job control threads have been joined
[2026-05-01 12:02:45] 2026-05-01 10:01:48,537 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:48,798 | INFO     | [data] copytool_out thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:49,216 | INFO     | [payload] failed_post thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:49,220 | INFO     | [job] validate thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:49,482 | INFO     | [job] control thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:49,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 12:02:45] 2026-05-01 10:01:53,662 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:01:57,202 | INFO     | job.realtimelogging is not enabled
[2026-05-01 12:02:45] 2026-05-01 10:01:58,207 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 12:02:45] 2026-05-01 10:02:17,725 | INFO     | PID=3735126 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 12:02:45] 2026-05-01 10:02:17,725 | INFO     | .. there are 14 such processes running
[2026-05-01 12:02:45] 2026-05-01 10:02:17,726 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 12:02:45] 2026-05-01 10:02:17,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 12:02:45] 2026-05-01 10:02:17,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 12:02:45] 2026-05-01 10:02:38,978 | INFO     | [monitor] cgroup control has ended
[2026-05-01 12:02:45] 2026-05-01 10:02:40,328 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22435000035136)>', '<ExcThread(monitor, started 22434769295104)>']
[2026-05-01 12:02:45] 2026-05-01 10:02:40,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 12:02:45] 2026-05-01 10:02:40,841 | INFO     | [monitor] control thread has ended
[2026-05-01 12:02:45] 2026-05-01 10:02:45,353 | INFO     | all workflow threads have been joined
[2026-05-01 12:02:45] 2026-05-01 10:02:45,353 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 12:02:45] 2026-05-01 10:02:45,353 | INFO     | traces error code: 0
[2026-05-01 12:02:45] 2026-05-01 10:02:45,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 12:02:45] 2026-05-01 10:02:45,493 [wrapper] ==== pilot stdout END ====
[2026-05-01 12:02:45] 2026-05-01 10:02:45,496 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 12:02:45] 2026-05-01 10:02:45,498 [wrapper] pilotpid: 3735126
[2026-05-01 12:02:45] 2026-05-01 10:02:45,501 [wrapper] Pilot exit status: 0
[2026-05-01 12:02:45] 2026-05-01 10:02:45,514 [wrapper] pandaids: 7122911482
[2026-05-01 12:02:45] 2026-05-01 10:02:45,585 [wrapper] cleanup supervisor_pilot 3941548 3735127
[2026-05-01 12:02:45] 2026-05-01 10:02:45,589 [wrapper] Test setup, not cleaning
[2026-05-01 12:02:45] 2026-05-01 10:02:45,592 [wrapper] apfmon messages muted
[2026-05-01 12:02:45] 2026-05-01 10:02:45,594 [wrapper] ==== wrapper stdout END ====
[2026-05-01 12:02:45] 2026-05-01 10:02:45,597 [wrapper] ==== wrapper stderr END ====
[2026-05-01 12:02:45]  *** Error codes and diagnostics ***
[2026-05-01 12:02:45]     "exeErrorCode": 0,
[2026-05-01 12:02:45]     "pilotErrorCode": 0,
[2026-05-01 12:02:45]  *** Listing of results directory ***
[2026-05-01 12:02:45] total 462736
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc    683926 Apr 30 20:30 pilot3.tar.gz
[2026-05-01 12:02:45] -rwx------. 1 boinc boinc     36322 Apr 30 20:34 runpilot2-wrapper.sh
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc      5631 Apr 30 20:35 queuedata.json
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc       100 May  1 09:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 12:02:45] -rwxr-xr-x. 1 boinc boinc      7986 May  1 09:20 run_atlas
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc       105 May  1 09:20 job.xml
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc      6481 May  1 09:20 init_data.xml
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc 303830858 May  1 09:20 EVNT.50016763._000053.pool.root.1
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc     15667 May  1 09:20 start_atlas.sh
[2026-05-01 12:02:45] drwxrwx--x. 2 boinc boinc      4096 May  1 09:20 shared
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc    697394 May  1 09:20 input.tar.gz
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc         0 May  1 09:20 boinc_lockfile
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc      2555 May  1 09:20 pandaJob.out
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc   1002147 May  1 09:20 agis_schedconf.cvmfs.json
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc   1510091 May  1 09:20 agis_ddmendpoints.agis.ALL.json
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc       448 May  1 09:20 workernode_map.json
[2026-05-01 12:02:45] drwx------. 5 boinc boinc      4096 May  1 09:20 pilot3
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc 163485626 May  1 12:01 HITS.50016766._001302.pool.root.1
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc       487 May  1 12:01 boinc_task_state.xml
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc      1034 May  1 12:01 memory_monitor_summary.json
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc    276328 May  1 12:01 log.50016766._001302.job.log.tgz.1
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc      6423 May  1 12:01 heartbeat_new.json
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc      6314 May  1 12:01 heartbeat.json
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc        95 May  1 12:02 pilot_heartbeat.json
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc      8192 May  1 12:02 boinc_mmap_file
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc        27 May  1 12:02 wrapper_checkpoint.txt
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc      6450 May  1 12:02 pilotlog.txt
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc    918198 May  1 12:02 log.50016766._001302.job.log.1
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc       357 May  1 12:02 output.list
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc       410 May  1 12:02 runtime_log
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc   1208320 May  1 12:02 result.tar.gz
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc      8844 May  1 12:02 runtime_log.err
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc       663 May  1 12:02 a0b82882faf1.diag
[2026-05-01 12:02:45] -rw-r--r--. 1 boinc boinc     21167 May  1 12:02 stderr.txt
[2026-05-01 12:02:45] HITS file was successfully produced:
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc 163485626 May  1 12:01 shared/HITS.pool.root.1
[2026-05-01 12:02:45]  *** Contents of shared directory: ***
[2026-05-01 12:02:45] total 458256
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc 303830858 May  1 09:20 ATLAS.root_0
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc     15667 May  1 09:20 start_atlas.sh
[2026-05-01 12:02:45] -rw-r--r--. 2 boinc boinc    697394 May  1 09:20 input.tar.gz
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc 163485626 May  1 12:01 HITS.pool.root.1
[2026-05-01 12:02:45] -rw-------. 1 boinc boinc   1208320 May  1 12:02 result.tar.gz
12:02:47 (3731215): run_atlas exited; CPU time 36065.410451
12:02:47 (3731215): called boinc_finish(0)

</stderr_txt>
]]>

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