Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:51 (881535): wrapper (7.7.26015): starting
15:22:51 (881535): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 15:22:51] Arguments: --nthreads 8
[2026-04-30 15:22:51] Threads: 8
[2026-04-30 15:22:51] Checking for CVMFS
[2026-04-30 15:22:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 15:22:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 15:22:52] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 15:22:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 15:22:58] 2.13.3.0 11112 326 61792 159062 2 25 17547153 32935936 6082 16776704 0 1371440 99.928 355289 26645 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 0
[2026-04-30 15:22:58] CVMFS is ok
[2026-04-30 15:22:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 15:22:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 15:22:58] Further information can be found at the LHC@home message board.
[2026-04-30 15:22:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 15:22:58] Checking for apptainer binary...
[2026-04-30 15:22:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 15:22:58] Running /usr/bin/apptainer --version
[2026-04-30 15:22:58] apptainer version 1.4.5-3.el9
[2026-04-30 15:22:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 15:22:59] c6-2-29-1.aglt2.org
[2026-04-30 15:22:59] apptainer works
[2026-04-30 15:22:59] Set ATHENA_PROC_NUMBER=8
[2026-04-30 15:22:59] Set ATHENA_CORE_NUMBER=8
[2026-04-30 15:22:59] Starting ATLAS job with PandaID=7122845595
[2026-04-30 15:22:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 00:20:30]  *** The last 200 lines of the pilot log: ***
[2026-05-01 00:20:30] 2026-05-01 04:19:43,115 | INFO     | job 7122845595 has finished - writing final server update
[2026-05-01 00:20:30] 2026-05-01 04:19:43,115 | INFO     | total number of processed events: 400 (read)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,203 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-7122845595/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,204 | INFO     | extracted standard info from prmon json
[2026-05-01 00:20:30] 2026-05-01 04:19:43,204 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 00:20:30] 2026-05-01 04:19:43,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 00:20:30] 2026-05-01 04:19:43,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 00:20:30] 2026-05-01 04:19:43,277 | INFO     | fitting pss+swap vs Time
[2026-05-01 00:20:30] 2026-05-01 04:19:43,293 | INFO     | sum of square deviations: 44613408733.19664
[2026-05-01 00:20:30] 2026-05-01 04:19:43,309 | INFO     | sum of deviations: 219159932608.75186
[2026-05-01 00:20:30] 2026-05-01 04:19:43,309 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,309 | INFO     | mean y: 2475938.4312977097
[2026-05-01 00:20:30] 2026-05-01 04:19:43,309 | INFO     | intersect: 2475938.4312977097
[2026-05-01 00:20:30] 2026-05-01 04:19:43,310 | INFO     | chi2: 5.019326173059254
[2026-05-01 00:20:30] 2026-05-01 04:19:43,345 | INFO     | sum of square deviations: 43348463933.04421
[2026-05-01 00:20:30] 2026-05-01 04:19:43,383 | INFO     | sum of deviations: 286916169356.1136
[2026-05-01 00:20:30] 2026-05-01 04:19:43,383 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,383 | INFO     | mean y: 2484058.493256262
[2026-05-01 00:20:30] 2026-05-01 04:19:43,383 | INFO     | intersect: 2484058.493256262
[2026-05-01 00:20:30] 2026-05-01 04:19:43,384 | INFO     | chi2: 3.471856524222584
[2026-05-01 00:20:30] 2026-05-01 04:19:43,384 | INFO     | current chi2=3.471856524222584 (change=30.83022691656429 %)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,385 | INFO     | sum of square deviations: 42107627216.74132
[2026-05-01 00:20:30] 2026-05-01 04:19:43,449 | INFO     | sum of deviations: 283740050532.6499
[2026-05-01 00:20:30] 2026-05-01 04:19:43,450 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,450 | INFO     | mean y: 2483668.003891051
[2026-05-01 00:20:30] 2026-05-01 04:19:43,450 | INFO     | intersect: 2483668.003891051
[2026-05-01 00:20:30] 2026-05-01 04:19:43,451 | INFO     | chi2: 3.4716568773439493
[2026-05-01 00:20:30] 2026-05-01 04:19:43,451 | INFO     | current chi2=3.4716568773439493 (change=0.005750435746454156 %)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,451 | INFO     | right removable region: 513
[2026-05-01 00:20:30] 2026-05-01 04:19:43,452 | INFO     | sum of square deviations: 43348408423.04422
[2026-05-01 00:20:30] 2026-05-01 04:19:43,473 | INFO     | sum of deviations: 67630492621.641815
[2026-05-01 00:20:30] 2026-05-01 04:19:43,474 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,474 | INFO     | mean y: 2494180.190751445
[2026-05-01 00:20:30] 2026-05-01 04:19:43,474 | INFO     | intersect: 2494180.190751445
[2026-05-01 00:20:30] 2026-05-01 04:19:43,475 | INFO     | chi2: 1.8452166021179288
[2026-05-01 00:20:30] 2026-05-01 04:19:43,475 | INFO     | current chi2=1.8452166021179288 (change=63.23776262993329 %)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,476 | INFO     | sum of square deviations: 42107548100.38901
[2026-05-01 00:20:30] 2026-05-01 04:19:43,497 | INFO     | sum of deviations: 32931603149.879345
[2026-05-01 00:20:30] 2026-05-01 04:19:43,498 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,498 | INFO     | mean y: 2498437.2101167315
[2026-05-01 00:20:30] 2026-05-01 04:19:43,498 | INFO     | intersect: 2498437.2101167315
[2026-05-01 00:20:30] 2026-05-01 04:19:43,499 | INFO     | chi2: 1.6917271676918766
[2026-05-01 00:20:30] 2026-05-01 04:19:43,499 | INFO     | current chi2=1.6917271676918766 (change=8.318233981304848 %)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,499 | INFO     | left removable region: 10
[2026-05-01 00:20:30] 2026-05-01 04:19:43,500 | INFO     | sum of square deviations: 39461572845.896034
[2026-05-01 00:20:30] 2026-05-01 04:19:43,529 | INFO     | sum of deviations: 99479340567.75345
[2026-05-01 00:20:30] 2026-05-01 04:19:43,529 | INFO     | mean x (centered): 0.0
[2026-05-01 00:20:30] 2026-05-01 04:19:43,529 | INFO     | mean y: 2506721.5805168985
[2026-05-01 00:20:30] 2026-05-01 04:19:43,529 | INFO     | intersect: 2506721.5805168985
[2026-05-01 00:20:30] 2026-05-01 04:19:43,530 | INFO     | chi2: 0.11039055371045463
[2026-05-01 00:20:30] 2026-05-01 04:19:43,531 | INFO     | current memory leak: 2.52 B/s (using 503 data points, chi2=0.11)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,544 | INFO     | could have reported an average CPU frequency of 2995 MHz (21 samples)
[2026-05-01 00:20:30] 2026-05-01 04:19:43,544 | INFO     | ..............................
[2026-05-01 00:20:30] 2026-05-01 04:19:43,544 | INFO     | . Timing measurements:
[2026-05-01 00:20:30] 2026-05-01 04:19:43,544 | INFO     | . get job = 0 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . initial setup = 53 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . payload setup = 81 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . stage-in = 0 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . payload execution = 31946 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . stage-out = 7 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | . log creation = 1 s
[2026-05-01 00:20:30] 2026-05-01 04:19:43,545 | INFO     | ..............................
[2026-05-01 00:20:30] 2026-05-01 04:19:44,342 | INFO     | 
[2026-05-01 00:20:30] 2026-05-01 04:19:44,343 | INFO     | job summary report
[2026-05-01 00:20:30] 2026-05-01 04:19:44,343 | INFO     | --------------------------------------------------
[2026-05-01 00:20:30] 2026-05-01 04:19:44,343 | INFO     | PanDA job id: 7122845595
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | task id: 50017356
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | errors: (none)
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | pilot state: finished 
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | transexitcode: 0
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | exeerrorcode: 0
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | exeerrordiag: 
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | exitcode: 0
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | exitmsg: OK
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | cpuconsumptiontime: 80119 s
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | nevents: 400
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | neventsw: 0
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | pid: 912245
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | pgrp: 912245
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | corecount: 8
[2026-05-01 00:20:30] 2026-05-01 04:19:44,344 | INFO     | event service: False
[2026-05-01 00:20:30] 2026-05-01 04:19:44,345 | INFO     | sizes: {0: 2276492, 1: 2278321, 12: 2278321, 32032: 2317751, 32033: 2317750, 32040: 2326804, 32044: 2327182}
[2026-05-01 00:20:30] 2026-05-01 04:19:44,345 | INFO     | --------------------------------------------------
[2026-05-01 00:20:30] 2026-05-01 04:19:44,345 | INFO     | 
[2026-05-01 00:20:30] 2026-05-01 04:19:44,345 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-05-01 00:20:30] 2026-05-01 04:19:44,421 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,422 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 00:20:30] 2026-05-01 04:19:44,423 | INFO     | job 7122845595 has completed (purged errors)
[2026-05-01 00:20:30] 2026-05-01 04:19:44,424 | INFO     | overall cleanup function is called
[2026-05-01 00:20:30] 2026-05-01 04:19:45,502 | INFO     | --- collectZombieJob: --- 10, [912245]
[2026-05-01 00:20:30] 2026-05-01 04:19:45,502 | INFO     | zombie collector waiting for pid 912245
[2026-05-01 00:20:30] 2026-05-01 04:19:45,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 00:20:30] 2026-05-01 04:19:45,502 | INFO     | collected zombie processes
[2026-05-01 00:20:30] 2026-05-01 04:19:45,502 | INFO     | will attempt to kill all subprocesses of pid=912245
[2026-05-01 00:20:30] 2026-05-01 04:19:45,793 | INFO     | PID=892103 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 00:20:30] 2026-05-01 04:19:45,793 | INFO     | .. there are 19 such processes running
[2026-05-01 00:20:30] 2026-05-01 04:19:46,142 | INFO     | process IDs to be killed: [912245] (in reverse order)
[2026-05-01 00:20:30] 2026-05-01 04:19:46,335 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 00:20:30] 2026-05-01 04:19:46,348 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 00:20:30] 2026-05-01 04:19:46,375 | INFO     | did not find any defunct processes belonging to 912245
[2026-05-01 00:20:30] 2026-05-01 04:19:46,414 | INFO     | did not find any defunct processes belonging to 912245
[2026-05-01 00:20:30] 2026-05-01 04:19:46,415 | INFO     | Ready for new job
[2026-05-01 00:20:30] 2026-05-01 04:19:46,433 | INFO     | ***************************************
[2026-05-01 00:20:30] 2026-05-01 04:19:46,433 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 00:20:30] 2026-05-01 04:19:46,433 | INFO     | ***************************************
[2026-05-01 00:20:30] 2026-05-01 04:19:46,433 | INFO     | 
[2026-05-01 00:20:30] 2026-05-01 04:19:46,466 | INFO     | architecture information:
[2026-05-01 00:20:30] 2026-05-01 04:19:46,490 | INFO     | executing command: cat /etc/os-release
[2026-05-01 00:20:30] 2026-05-01 04:19:46,642 | INFO     | cat /etc/os-release:
[2026-05-01 00:20:30] NAME="CentOS Linux"
[2026-05-01 00:20:30] VERSION="7 (Core)"
[2026-05-01 00:20:30] ID="centos"
[2026-05-01 00:20:30] ID_LIKE="rhel fedora"
[2026-05-01 00:20:30] VERSION_ID="7"
[2026-05-01 00:20:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 00:20:30] ANSI_COLOR="0;31"
[2026-05-01 00:20:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 00:20:30] HOME_URL="https://www.centos.org/"
[2026-05-01 00:20:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 00:20:30] 
[2026-05-01 00:20:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 00:20:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 00:20:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 00:20:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 00:20:30] 
[2026-05-01 00:20:30] 2026-05-01 04:19:46,643 | INFO     | ***************************************
[2026-05-01 00:20:30] 2026-05-01 04:19:47,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-05-01 00:20:30] 2026-05-01 04:19:47,229 | INFO     | sufficient remaining disk space (73560752128 B)
[2026-05-01 00:20:30] 2026-05-01 04:19:47,229 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 00:20:30] 2026-05-01 04:19:47,229 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 00:20:30] 2026-05-01 04:19:47,229 | INFO     | update_server=False
[2026-05-01 00:20:30] 2026-05-01 04:19:47,229 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 00:20:30] 2026-05-01 04:19:47,264 | INFO     | all data control threads have been joined
[2026-05-01 00:20:30] 2026-05-01 04:19:47,700 | INFO     | all job control threads have been joined
[2026-05-01 00:20:30] 2026-05-01 04:19:47,704 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 00:20:30] 2026-05-01 04:19:47,704 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 00:20:30] 2026-05-01 04:19:47,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 00:20:30] 2026-05-01 04:19:47,705 | INFO     | will abort loop
[2026-05-01 00:20:30] 2026-05-01 04:19:47,831 | INFO     | all payload control threads have been joined
[2026-05-01 00:20:30] 2026-05-01 04:19:48,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 00:20:30] 2026-05-01 04:19:48,237 | INFO     | [job] retrieve thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,270 | INFO     | [data] control thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,672 | INFO     | [payload] validate_post thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,707 | INFO     | [job] control thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,710 | INFO     | [job] job monitor thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,725 | INFO     | [payload] failed_post thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,837 | INFO     | [payload] control thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,868 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:48,872 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:49,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 00:20:30] 2026-05-01 04:19:49,141 | INFO     | [data] copytool_in thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:49,155 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 00:20:30] 2026-05-01 04:19:49,363 | INFO     | [job] validate thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:49,426 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:49,434 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:50,030 | INFO     | [data] copytool_out thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:50,037 | INFO     | [job] queue monitor thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:19:53,164 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 00:20:30] 2026-05-01 04:20:19,224 | INFO     | PID=892103 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 00:20:30] 2026-05-01 04:20:19,224 | INFO     | .. there are 19 such processes running
[2026-05-01 00:20:30] 2026-05-01 04:20:19,226 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 00:20:30] 2026-05-01 04:20:19,226 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 00:20:30] 2026-05-01 04:20:19,226 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 00:20:30] 2026-05-01 04:20:24,330 | INFO     | [monitor] cgroup control has ended
[2026-05-01 00:20:30] 2026-05-01 04:20:24,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139787251369792)>', '<ExcThread(monitor, started 139786815792896)>']
[2026-05-01 00:20:30] 2026-05-01 04:20:25,262 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 00:20:30] 2026-05-01 04:20:25,262 | INFO     | [monitor] control thread has ended
[2026-05-01 00:20:30] 2026-05-01 04:20:29,544 | INFO     | all workflow threads have been joined
[2026-05-01 00:20:30] 2026-05-01 04:20:29,545 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 00:20:30] 2026-05-01 04:20:29,545 | INFO     | traces error code: 0
[2026-05-01 00:20:30] 2026-05-01 04:20:29,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 00:20:30] 2026-05-01 04:20:29,935 [wrapper] ==== pilot stdout END ====
[2026-05-01 00:20:30] 2026-05-01 04:20:29,982 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 00:20:30] 2026-05-01 04:20:30,012 [wrapper] pilotpid: 892103
[2026-05-01 00:20:30] 2026-05-01 04:20:30,023 [wrapper] Pilot exit status: 0
[2026-05-01 00:20:30] 2026-05-01 04:20:30,072 [wrapper] pandaids: 7122845595
[2026-05-01 00:20:30] 2026-05-01 04:20:30,219 [wrapper] cleanup supervisor_pilot 2531220 892104
[2026-05-01 00:20:30] 2026-05-01 04:20:30,244 [wrapper] Test setup, not cleaning
[2026-05-01 00:20:30] 2026-05-01 04:20:30,259 [wrapper] apfmon messages muted
[2026-05-01 00:20:30] 2026-05-01 04:20:30,262 [wrapper] ==== wrapper stdout END ====
[2026-05-01 00:20:30] 2026-05-01 04:20:30,265 [wrapper] ==== wrapper stderr END ====
[2026-05-01 00:20:30]  *** Error codes and diagnostics ***
[2026-05-01 00:20:30]     "exeErrorCode": 0,
[2026-05-01 00:20:30]     "pilotErrorCode": 0,
[2026-05-01 00:20:30]  *** Listing of results directory ***
[2026-05-01 00:20:30] total 443768
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 12:53 pilot3.tar.gz
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 13:36 queuedata.json
[2026-05-01 00:20:30] -rwx------. 1 boincer umatlas     36322 Apr 30 13:36 runpilot2-wrapper.sh
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas       100 Apr 30 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 00:20:30] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 15:22 run_atlas
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas       105 Apr 30 15:22 job.xml
[2026-05-01 00:20:30] -rw-r--r--. 2 boincer umatlas 276024828 Apr 30 15:22 EVNT.50017351._000013.pool.root.1
[2026-05-01 00:20:30] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 15:22 start_atlas.sh
[2026-05-01 00:20:30] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 15:22 shared
[2026-05-01 00:20:30] -rw-r--r--. 2 boincer umatlas    697391 Apr 30 15:22 input.tar.gz
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas         0 Apr 30 15:22 boinc_lockfile
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas      2516 Apr 30 15:22 pandaJob.out
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas        57 Apr 30 15:23 setup.sh.local
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas    997586 Apr 30 15:24 agis_schedconf.cvmfs.json
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas       433 Apr 30 15:25 workernode_map.json
[2026-05-01 00:20:30] drwx------. 5 boincer umatlas      4096 Apr 30 15:25 pilot3
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas      6756 May  1 00:12 init_data.xml
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas 167762306 May  1 00:17 HITS.50017356._000305.pool.root.1
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas       488 May  1 00:18 boinc_task_state.xml
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas      1040 May  1 00:19 memory_monitor_summary.json
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas   1510091 May  1 00:19 agis_ddmendpoints.agis.ALL.json
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas    545755 May  1 00:19 log.50017356._000305.job.log.tgz.1
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas      6388 May  1 00:19 heartbeat_new.json
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas      6279 May  1 00:19 heartbeat.json
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas        95 May  1 00:20 pilot_heartbeat.json
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas      8192 May  1 00:20 boinc_mmap_file
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas        28 May  1 00:20 wrapper_checkpoint.txt
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas      5008 May  1 00:20 pilotlog.txt
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas   2702483 May  1 00:20 log.50017356._000305.job.log.1
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas       357 May  1 00:20 output.list
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas       410 May  1 00:20 runtime_log
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas   3266560 May  1 00:20 result.tar.gz
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas      8970 May  1 00:20 runtime_log.err
[2026-05-01 00:20:30] -rw-------. 1 boincer umatlas       657 May  1 00:20 9337ffc4370d.diag
[2026-05-01 00:20:30] -rw-r--r--. 1 boincer umatlas     21107 May  1 00:20 stderr.txt
[2026-05-01 00:20:30] HITS file was successfully produced:
[2026-05-01 00:20:31] -rw-------. 1 boincer umatlas 167762306 May  1 00:17 shared/HITS.pool.root.1
[2026-05-01 00:20:31]  *** Contents of shared directory: ***
[2026-05-01 00:20:31] total 437284
[2026-05-01 00:20:31] -rw-r--r--. 2 boincer umatlas 276024828 Apr 30 15:22 ATLAS.root_0
[2026-05-01 00:20:31] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 15:22 start_atlas.sh
[2026-05-01 00:20:31] -rw-r--r--. 2 boincer umatlas    697391 Apr 30 15:22 input.tar.gz
[2026-05-01 00:20:31] -rw-------. 1 boincer umatlas 167762306 May  1 00:17 HITS.pool.root.1
[2026-05-01 00:20:31] -rw-------. 1 boincer umatlas   3266560 May  1 00:20 result.tar.gz
00:20:32 (881535): run_atlas exited; CPU time 81026.127195
00:20:32 (881535): called boinc_finish(0)

</stderr_txt>
]]>

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