Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:22:54 (4038): wrapper (7.7.26015): starting
08:22:54 (4038): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 08:22:54] Arguments: --nthreads 8
[2026-05-01 08:22:54] Threads: 8
[2026-05-01 08:22:54] Checking for CVMFS
[2026-05-01 08:22:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 08:22:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 08:22:58] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 08:22:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 08:22:59] 2.11.2.0 15381 22398 102456 159081 3 53 14836108 25165824 96 130560 0 7619298 99.931 5091557 8761 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 08:22:59] CVMFS is ok
[2026-05-01 08:22:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 08:22:59] Checking for apptainer binary...
[2026-05-01 08:22:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 08:22:59] Running /usr/bin/apptainer --version
[2026-05-01 08:22:59] apptainer version 1.3.2-1.el7
[2026-05-01 08:22:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 08:23:06] cg-vwn426.simple-grid.lan
[2026-05-01 08:23:06] apptainer works
[2026-05-01 08:23:06] Set ATHENA_PROC_NUMBER=8
[2026-05-01 08:23:06] Set ATHENA_CORE_NUMBER=8
[2026-05-01 08:23:06] Starting ATLAS job with PandaID=7122844339
[2026-05-01 08:23:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 13:43:55]  *** The last 200 lines of the pilot log: ***
[2026-05-01 13:43:55] 2026-05-01 11:42:52,055 | INFO     | log transfer has been attempted: DONE
[2026-05-01 13:43:55] 2026-05-01 11:42:52,056 | INFO     | job 7122844339 has finished - writing final server update
[2026-05-01 13:43:55] 2026-05-01 11:42:52,056 | INFO     | total number of processed events: 400 (read)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,058 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-7122844339/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,059 | INFO     | extracted standard info from prmon json
[2026-05-01 13:43:55] 2026-05-01 11:42:52,059 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 13:43:55] 2026-05-01 11:42:52,059 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 13:43:55] 2026-05-01 11:42:52,060 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 13:43:55] 2026-05-01 11:42:52,066 | INFO     | fitting pss+swap vs Time
[2026-05-01 13:43:55] 2026-05-01 11:42:52,067 | INFO     | sum of square deviations: 8625843592.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,070 | INFO     | sum of deviations: 66876429021.99966
[2026-05-01 13:43:55] 2026-05-01 11:42:52,070 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,073 | INFO     | mean y: 2506073.7326732674
[2026-05-01 13:43:55] 2026-05-01 11:42:52,074 | INFO     | intersect: 2506073.7326732674
[2026-05-01 13:43:55] 2026-05-01 11:42:52,074 | INFO     | chi2: 9.55749375298299
[2026-05-01 13:43:55] 2026-05-01 11:42:52,075 | INFO     | sum of square deviations: 8205826414.5
[2026-05-01 13:43:55] 2026-05-01 11:42:52,078 | INFO     | sum of deviations: 86627054345.00037
[2026-05-01 13:43:55] 2026-05-01 11:42:52,078 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,078 | INFO     | mean y: 2513146.845637584
[2026-05-01 13:43:55] 2026-05-01 11:42:52,079 | INFO     | intersect: 2513146.845637584
[2026-05-01 13:43:55] 2026-05-01 11:42:52,079 | INFO     | chi2: 8.8584677483954
[2026-05-01 13:43:55] 2026-05-01 11:42:52,079 | INFO     | current chi2=8.8584677483954 (change=7.313904907020395 %)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,079 | INFO     | right removable region: 297
[2026-05-01 13:43:55] 2026-05-01 11:42:52,080 | INFO     | sum of square deviations: 8205826414.5
[2026-05-01 13:43:55] 2026-05-01 11:42:52,083 | INFO     | sum of deviations: -45214334844.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,083 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,084 | INFO     | mean y: 2546759.523489933
[2026-05-01 13:43:55] 2026-05-01 11:42:52,084 | INFO     | intersect: 2546759.523489933
[2026-05-01 13:43:55] 2026-05-01 11:42:52,084 | INFO     | chi2: 4.181118382105585
[2026-05-01 13:43:55] 2026-05-01 11:42:52,084 | INFO     | current chi2=4.181118382105585 (change=56.25298336396385 %)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,085 | INFO     | sum of square deviations: 7799669962.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,092 | INFO     | sum of deviations: -129902289103.00002
[2026-05-01 13:43:55] 2026-05-01 11:42:52,093 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,093 | INFO     | mean y: 2578518.3959044367
[2026-05-01 13:43:55] 2026-05-01 11:42:52,093 | INFO     | intersect: 2578518.3959044367
[2026-05-01 13:43:55] 2026-05-01 11:42:52,093 | INFO     | chi2: 1.2390559406473356
[2026-05-01 13:43:55] 2026-05-01 11:42:52,094 | INFO     | current chi2=1.2390559406473356 (change=70.3654422713725 %)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,094 | INFO     | sum of square deviations: 7407141672.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,097 | INFO     | sum of deviations: -144546703215.49997
[2026-05-01 13:43:55] 2026-05-01 11:42:52,097 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,097 | INFO     | mean y: 2584180.3645833335
[2026-05-01 13:43:55] 2026-05-01 11:42:52,098 | INFO     | intersect: 2584180.3645833335
[2026-05-01 13:43:55] 2026-05-01 11:42:52,098 | INFO     | chi2: 1.0670664321716299
[2026-05-01 13:43:55] 2026-05-01 11:42:52,098 | INFO     | current chi2=1.0670664321716299 (change=13.8806895502919 %)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,098 | INFO     | left removable region: 15
[2026-05-01 13:43:55] 2026-05-01 11:42:52,099 | INFO     | sum of square deviations: 6953769450.5
[2026-05-01 13:43:55] 2026-05-01 11:42:52,102 | INFO     | sum of deviations: -121762224775.49997
[2026-05-01 13:43:55] 2026-05-01 11:42:52,102 | INFO     | mean x (centered): 0.0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,102 | INFO     | mean y: 2593241.5921985814
[2026-05-01 13:43:55] 2026-05-01 11:42:52,102 | INFO     | intersect: 2593241.5921985814
[2026-05-01 13:43:55] 2026-05-01 11:42:52,103 | INFO     | chi2: 0.272513104436994
[2026-05-01 13:43:55] 2026-05-01 11:42:52,103 | INFO     | current memory leak: -17.51 B/s (using 282 data points, chi2=0.27)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,104 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,104 | INFO     | ..............................
[2026-05-01 13:43:55] 2026-05-01 11:42:52,104 | INFO     | . Timing measurements:
[2026-05-01 13:43:55] 2026-05-01 11:42:52,104 | INFO     | . get job = 0 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . initial setup = 113 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . payload setup = 235 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . stage-in = 0 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . payload execution = 18558 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . stage-out = 5 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | . log creation = 1 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,105 | INFO     | ..............................
[2026-05-01 13:43:55] 2026-05-01 11:42:52,330 | INFO     | 
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | job summary report
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | --------------------------------------------------
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | PanDA job id: 7122844339
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | task id: 50017142
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | errors: (none)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,331 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | pilot state: finished 
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | transexitcode: 0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | exeerrorcode: 0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | exeerrordiag: 
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | exitcode: 0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | exitmsg: OK
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | cpuconsumptiontime: 70553 s
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | nevents: 400
[2026-05-01 13:43:55] 2026-05-01 11:42:52,332 | INFO     | neventsw: 0
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | pid: 12505
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | pgrp: 12505
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | corecount: 8
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | event service: False
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | sizes: {0: 2275884, 1: 2276569, 2: 2278398, 13: 2278398, 18798: 2311087, 18799: 2311086, 18805: 2320598, 18808: 2320736}
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | --------------------------------------------------
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | 
[2026-05-01 13:43:55] 2026-05-01 11:42:52,333 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-05-01 13:43:55] 2026-05-01 11:42:52,716 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,717 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | job 7122844339 has completed (purged errors)
[2026-05-01 13:43:55] 2026-05-01 11:42:52,719 | INFO     | overall cleanup function is called
[2026-05-01 13:43:55] 2026-05-01 11:42:53,727 | INFO     | --- collectZombieJob: --- 10, [12505]
[2026-05-01 13:43:55] 2026-05-01 11:42:53,728 | INFO     | zombie collector waiting for pid 12505
[2026-05-01 13:43:55] 2026-05-01 11:42:53,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 13:43:55] 2026-05-01 11:42:53,728 | INFO     | collected zombie processes
[2026-05-01 13:43:55] 2026-05-01 11:42:53,728 | INFO     | will attempt to kill all subprocesses of pid=12505
[2026-05-01 13:43:55] 2026-05-01 11:42:53,799 | INFO     | process IDs to be killed: [12505] (in reverse order)
[2026-05-01 13:43:55] 2026-05-01 11:42:54,598 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 13:43:55] 2026-05-01 11:42:54,599 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 13:43:55] 2026-05-01 11:42:54,600 | INFO     | did not find any defunct processes belonging to 12505
[2026-05-01 13:43:55] 2026-05-01 11:42:54,602 | INFO     | did not find any defunct processes belonging to 12505
[2026-05-01 13:43:55] 2026-05-01 11:42:54,602 | INFO     | Ready for new job
[2026-05-01 13:43:55] 2026-05-01 11:42:54,604 | INFO     | ***************************************
[2026-05-01 13:43:55] 2026-05-01 11:42:54,604 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 13:43:55] 2026-05-01 11:42:54,604 | INFO     | ***************************************
[2026-05-01 13:43:55] 2026-05-01 11:42:54,605 | INFO     | 
[2026-05-01 13:43:55] 2026-05-01 11:42:54,605 | INFO     | pilot is running in a VM
[2026-05-01 13:43:55] 2026-05-01 11:42:54,605 | INFO     | architecture information:
[2026-05-01 13:43:55] 2026-05-01 11:42:54,607 | INFO     | executing command: cat /etc/os-release
[2026-05-01 13:43:55] 2026-05-01 11:42:54,915 | INFO     | cat /etc/os-release:
[2026-05-01 13:43:55] NAME="CentOS Linux"
[2026-05-01 13:43:55] VERSION="7 (Core)"
[2026-05-01 13:43:55] ID="centos"
[2026-05-01 13:43:55] ID_LIKE="rhel fedora"
[2026-05-01 13:43:55] VERSION_ID="7"
[2026-05-01 13:43:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 13:43:55] ANSI_COLOR="0;31"
[2026-05-01 13:43:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 13:43:55] HOME_URL="https://www.centos.org/"
[2026-05-01 13:43:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 13:43:55] 
[2026-05-01 13:43:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 13:43:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 13:43:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 13:43:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 13:43:55] 
[2026-05-01 13:43:55] 2026-05-01 11:42:54,915 | INFO     | ***************************************
[2026-05-01 13:43:55] 2026-05-01 11:42:55,419 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-05-01 13:43:55] 2026-05-01 11:42:55,686 | INFO     | sufficient remaining disk space (496554213376 B)
[2026-05-01 13:43:55] 2026-05-01 11:42:55,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 13:43:55] 2026-05-01 11:42:55,687 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 13:43:55] 2026-05-01 11:42:55,687 | INFO     | update_server=False
[2026-05-01 13:43:55] 2026-05-01 11:42:55,687 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 13:43:55] 2026-05-01 11:42:55,688 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 13:43:55] 2026-05-01 11:42:55,734 | INFO     | all data control threads have been joined
[2026-05-01 13:43:55] 2026-05-01 11:42:56,126 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 13:43:55] 2026-05-01 11:42:56,127 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 13:43:55] 2026-05-01 11:42:56,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:43:55] 2026-05-01 11:42:56,127 | INFO     | will abort loop
[2026-05-01 13:43:55] 2026-05-01 11:42:56,330 | INFO     | all job control threads have been joined
[2026-05-01 13:43:55] 2026-05-01 11:42:56,522 | INFO     | all payload control threads have been joined
[2026-05-01 13:43:55] 2026-05-01 11:42:56,693 | INFO     | [job] retrieve thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:56,699 | INFO     | [payload] validate_post thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:56,740 | INFO     | [data] control thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:56,754 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 13:43:55] 2026-05-01 11:42:56,801 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:56,899 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,133 | INFO     | [job] job monitor thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,156 | INFO     | [data] copytool_in thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,257 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:43:55] 2026-05-01 11:42:57,322 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,331 | INFO     | [payload] failed_post thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,336 | INFO     | [job] control thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,524 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,529 | INFO     | [payload] control thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:57,636 | INFO     | [job] validate thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:58,264 | INFO     | [job] queue monitor thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:58,762 | INFO     | [data] copytool_out thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:42:59,697 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 13:43:55] 2026-05-01 11:43:24,256 | INFO     | PID=8016 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-01 13:43:55] 2026-05-01 11:43:24,256 | INFO     | .. there are 2 such processes running
[2026-05-01 13:43:55] 2026-05-01 11:43:24,256 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 13:43:55] 2026-05-01 11:43:24,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 13:43:55] 2026-05-01 11:43:24,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 13:43:55] 2026-05-01 11:43:42,904 | INFO     | [monitor] cgroup control has ended
[2026-05-01 13:43:55] 2026-05-01 11:43:44,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609033119552)>', '<ExcThread(monitor, started 140608731588352)>']
[2026-05-01 13:43:55] 2026-05-01 11:43:45,386 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 13:43:55] 2026-05-01 11:43:45,387 | INFO     | [monitor] control thread has ended
[2026-05-01 13:43:55] 2026-05-01 11:43:49,910 | INFO     | all workflow threads have been joined
[2026-05-01 13:43:55] 2026-05-01 11:43:49,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 13:43:55] 2026-05-01 11:43:49,911 | INFO     | traces error code: 0
[2026-05-01 13:43:55] 2026-05-01 11:43:49,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 13:43:55] 2026-05-01 11:43:50,375 [wrapper] ==== pilot stdout END ====
[2026-05-01 13:43:55] 2026-05-01 11:43:50,472 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 13:43:55] 2026-05-01 11:43:50,569 [wrapper] pilotpid: 8016
[2026-05-01 13:43:55] 2026-05-01 11:43:50,685 [wrapper] Pilot exit status: 0
[2026-05-01 13:43:55] 2026-05-01 11:43:51,070 [wrapper] pandaids: 7122844339
[2026-05-01 13:43:55] 2026-05-01 11:43:52,229 [wrapper] cleanup supervisor_pilot 20377 8017
[2026-05-01 13:43:55] 2026-05-01 11:43:52,353 [wrapper] Test setup, not cleaning
[2026-05-01 13:43:55] 2026-05-01 11:43:52,418 [wrapper] apfmon messages muted
[2026-05-01 13:43:55] 2026-05-01 11:43:52,543 [wrapper] ==== wrapper stdout END ====
[2026-05-01 13:43:55] 2026-05-01 11:43:52,681 [wrapper] ==== wrapper stderr END ====
[2026-05-01 13:43:55]  *** Error codes and diagnostics ***
[2026-05-01 13:43:55]     "exeErrorCode": 0,
[2026-05-01 13:43:55]     "pilotErrorCode": 0,
[2026-05-01 13:43:55]  *** Listing of results directory ***
[2026-05-01 13:43:55] total 483552
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc    683926 Apr 30 18:53 pilot3.tar.gz
[2026-05-01 13:43:55] -rwx------. 1 boinc boinc     36322 Apr 30 19:21 runpilot2-wrapper.sh
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc      5631 Apr 30 19:21 queuedata.json
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc       100 May  1 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 13:43:55] -rwxr-xr-x. 1 boinc boinc      7986 May  1 08:22 run_atlas
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc       105 May  1 08:22 job.xml
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc      6306 May  1 08:22 init_data.xml
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc 315251879 May  1 08:22 EVNT.50017136._000003.pool.root.1
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc     15667 May  1 08:22 start_atlas.sh
[2026-05-01 13:43:55] drwxrwx--x. 2 boinc boinc        68 May  1 08:22 shared
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc    697394 May  1 08:22 input.tar.gz
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc         0 May  1 08:22 boinc_lockfile
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc      2560 May  1 08:23 pandaJob.out
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc       415 May  1 08:29 workernode_map.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc   1002147 May  1 08:29 agis_schedconf.cvmfs.json
[2026-05-01 13:43:55] drwx------. 5 boinc boinc      4096 May  1 08:29 pilot3
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc 171456124 May  1 13:41 HITS.50017142._000084.pool.root.1
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc       489 May  1 13:41 boinc_task_state.xml
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc      1010 May  1 13:42 memory_monitor_summary.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc        95 May  1 13:42 pilot_heartbeat.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc   1508687 May  1 13:42 agis_ddmendpoints.agis.ALL.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc    428812 May  1 13:42 log.50017142._000084.job.log.tgz.1
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc      6327 May  1 13:42 heartbeat_new.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc      6218 May  1 13:42 heartbeat.json
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc      5068 May  1 13:43 pilotlog.txt
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc      8192 May  1 13:43 boinc_mmap_file
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc        28 May  1 13:43 wrapper_checkpoint.txt
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc   1734354 May  1 13:43 log.50017142._000084.job.log.1
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc       357 May  1 13:43 output.list
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc       410 May  1 13:43 runtime_log
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc   2181120 May  1 13:43 result.tar.gz
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc      8439 May  1 13:43 runtime_log.err
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc       656 May  1 13:43 8f9a1f9ee178.diag
[2026-05-01 13:43:55] -rw-r--r--. 1 boinc boinc     20625 May  1 13:43 stderr.txt
[2026-05-01 13:43:55] HITS file was successfully produced:
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc 171456124 May  1 13:41 shared/HITS.pool.root.1
[2026-05-01 13:43:55]  *** Contents of shared directory: ***
[2026-05-01 13:43:55] total 478136
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc 315251879 May  1 08:22 ATLAS.root_0
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc     15667 May  1 08:22 start_atlas.sh
[2026-05-01 13:43:55] -rw-r--r--. 2 boinc boinc    697394 May  1 08:22 input.tar.gz
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc 171456124 May  1 13:41 HITS.pool.root.1
[2026-05-01 13:43:55] -rw-------. 1 boinc boinc   2181120 May  1 13:43 result.tar.gz
13:43:56 (4038): run_atlas exited; CPU time 70734.785199
13:43:56 (4038): called boinc_finish(0)

</stderr_txt>
]]>

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