Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:06:01 (22606): wrapper (7.7.26015): starting
08:06:01 (22606): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 08:06:01] Arguments: --nthreads 8
[2026-05-01 08:06:01] Threads: 8
[2026-05-01 08:06:01] Checking for CVMFS
[2026-05-01 08:06:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 08:06:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 08:06:05] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 08:06:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 08:06:07] 2.11.2.0 2799 22396 99804 159079 0 54 16341993 25165824 96 130560 0 11496509 99.802 10835110 9323 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 08:06:07] CVMFS is ok
[2026-05-01 08:06:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 08:06:07] Checking for apptainer binary...
[2026-05-01 08:06:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 08:06:07] Running /usr/bin/apptainer --version
[2026-05-01 08:06:07] apptainer version 1.3.2-1.el7
[2026-05-01 08:06:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 08:06:27] cg-vwn400.simple-grid.lan
[2026-05-01 08:06:27] apptainer works
[2026-05-01 08:06:27] Set ATHENA_PROC_NUMBER=8
[2026-05-01 08:06:27] Set ATHENA_CORE_NUMBER=8
[2026-05-01 08:06:27] Starting ATLAS job with PandaID=7122844373
[2026-05-01 08:06:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 13:44:35]  *** The last 200 lines of the pilot log: ***
[2026-05-01 13:44:35] 2026-05-01 11:43:29,226 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,226 | INFO     | log transfer has been attempted: DONE
[2026-05-01 13:44:35] 2026-05-01 11:43:29,226 | INFO     | job 7122844373 has finished - writing final server update
[2026-05-01 13:44:35] 2026-05-01 11:43:29,227 | INFO     | total number of processed events: 400 (read)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,229 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-7122844373/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,230 | INFO     | extracted standard info from prmon json
[2026-05-01 13:44:35] 2026-05-01 11:43:29,230 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 13:44:35] 2026-05-01 11:43:29,230 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 13:44:35] 2026-05-01 11:43:29,230 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 13:44:35] 2026-05-01 11:43:29,237 | INFO     | fitting pss+swap vs Time
[2026-05-01 13:44:35] 2026-05-01 11:43:29,238 | INFO     | sum of square deviations: 10065751520.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,241 | INFO     | sum of deviations: 63990671460.99997
[2026-05-01 13:44:35] 2026-05-01 11:43:29,241 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,241 | INFO     | mean y: 2518518.2852664576
[2026-05-01 13:44:35] 2026-05-01 11:43:29,242 | INFO     | intersect: 2518518.2852664576
[2026-05-01 13:44:35] 2026-05-01 11:43:29,242 | INFO     | chi2: 9.599698235656229
[2026-05-01 13:44:35] 2026-05-01 11:43:29,243 | INFO     | sum of square deviations: 9599817202.5
[2026-05-01 13:44:35] 2026-05-01 11:43:29,246 | INFO     | sum of deviations: 85240656837.00003
[2026-05-01 13:44:35] 2026-05-01 11:43:29,246 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,247 | INFO     | mean y: 2525384.6815286623
[2026-05-01 13:44:35] 2026-05-01 11:43:29,247 | INFO     | intersect: 2525384.6815286623
[2026-05-01 13:44:35] 2026-05-01 11:43:29,247 | INFO     | chi2: 8.899138829634285
[2026-05-01 13:44:35] 2026-05-01 11:43:29,248 | INFO     | current chi2=8.899138829634285 (change=7.297723207796787 %)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,248 | INFO     | right removable region: 313
[2026-05-01 13:44:35] 2026-05-01 11:43:29,248 | INFO     | sum of square deviations: 9599817202.5
[2026-05-01 13:44:35] 2026-05-01 11:43:29,252 | INFO     | sum of deviations: -54819987580.99999
[2026-05-01 13:44:35] 2026-05-01 11:43:29,252 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,252 | INFO     | mean y: 2557394.7579617836
[2026-05-01 13:44:35] 2026-05-01 11:43:29,252 | INFO     | intersect: 2557394.7579617836
[2026-05-01 13:44:35] 2026-05-01 11:43:29,253 | INFO     | chi2: 4.235647497217611
[2026-05-01 13:44:35] 2026-05-01 11:43:29,253 | INFO     | current chi2=4.235647497217611 (change=55.87728496000931 %)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,253 | INFO     | sum of square deviations: 9148487810.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,257 | INFO     | sum of deviations: -144792398436.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,257 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,257 | INFO     | mean y: 2587765.197411003
[2026-05-01 13:44:35] 2026-05-01 11:43:29,257 | INFO     | intersect: 2587765.197411003
[2026-05-01 13:44:35] 2026-05-01 11:43:29,258 | INFO     | chi2: 1.283498220690091
[2026-05-01 13:44:35] 2026-05-01 11:43:29,258 | INFO     | current chi2=1.283498220690091 (change=69.69770922785197 %)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,258 | INFO     | sum of square deviations: 8711530780.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,262 | INFO     | sum of deviations: -161531258772.49994
[2026-05-01 13:44:35] 2026-05-01 11:43:29,262 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,262 | INFO     | mean y: 2593582.2927631577
[2026-05-01 13:44:35] 2026-05-01 11:43:29,262 | INFO     | intersect: 2593582.2927631577
[2026-05-01 13:44:35] 2026-05-01 11:43:29,263 | INFO     | chi2: 1.0934287234225224
[2026-05-01 13:44:35] 2026-05-01 11:43:29,263 | INFO     | current chi2=1.0934287234225224 (change=14.808707499833925 %)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,263 | INFO     | left removable region: 15
[2026-05-01 13:44:35] 2026-05-01 11:43:29,263 | INFO     | sum of square deviations: 8205826414.5
[2026-05-01 13:44:35] 2026-05-01 11:43:29,267 | INFO     | sum of deviations: -137165516555.49998
[2026-05-01 13:44:35] 2026-05-01 11:43:29,267 | INFO     | mean x (centered): 0.0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,267 | INFO     | mean y: 2602277.352348993
[2026-05-01 13:44:35] 2026-05-01 11:43:29,267 | INFO     | intersect: 2602277.352348993
[2026-05-01 13:44:35] 2026-05-01 11:43:29,268 | INFO     | chi2: 0.30416888439484896
[2026-05-01 13:44:35] 2026-05-01 11:43:29,268 | INFO     | current memory leak: -16.72 B/s (using 298 data points, chi2=0.30)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,269 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,269 | INFO     | ..............................
[2026-05-01 13:44:35] 2026-05-01 11:43:29,269 | INFO     | . Timing measurements:
[2026-05-01 13:44:35] 2026-05-01 11:43:29,269 | INFO     | . get job = 0 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,269 | INFO     | . initial setup = 115 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | . payload setup = 258 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | . stage-in = 0 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | . payload execution = 19557 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | . stage-out = 3 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | . log creation = 1 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,270 | INFO     | ..............................
[2026-05-01 13:44:35] 2026-05-01 11:43:29,394 | INFO     | 
[2026-05-01 13:44:35] 2026-05-01 11:43:29,394 | INFO     | job summary report
[2026-05-01 13:44:35] 2026-05-01 11:43:29,394 | INFO     | --------------------------------------------------
[2026-05-01 13:44:35] 2026-05-01 11:43:29,394 | INFO     | PanDA job id: 7122844373
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | task id: 50017142
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | errors: (none)
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | pilot state: finished 
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | transexitcode: 0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | exeerrorcode: 0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | exeerrordiag: 
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | exitcode: 0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,395 | INFO     | exitmsg: OK
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | cpuconsumptiontime: 74337 s
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | nevents: 400
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | neventsw: 0
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | pid: 31035
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | pgrp: 31035
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | corecount: 8
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | event service: False
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | sizes: {0: 2276490, 1: 2276947, 2: 2278403, 12: 2278403, 19820: 2311690, 19824: 2320964, 19827: 2321342}
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | --------------------------------------------------
[2026-05-01 13:44:35] 2026-05-01 11:43:29,396 | INFO     | 
[2026-05-01 13:44:35] 2026-05-01 11:43:29,397 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2026-05-01 13:44:35] 2026-05-01 11:43:30,019 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,022 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 13:44:35] 2026-05-01 11:43:30,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,022 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 13:44:35] 2026-05-01 11:43:30,022 | INFO     | job 7122844373 has completed (purged errors)
[2026-05-01 13:44:35] 2026-05-01 11:43:30,022 | INFO     | overall cleanup function is called
[2026-05-01 13:44:35] 2026-05-01 11:43:31,031 | INFO     | --- collectZombieJob: --- 10, [31035]
[2026-05-01 13:44:35] 2026-05-01 11:43:31,031 | INFO     | zombie collector waiting for pid 31035
[2026-05-01 13:44:35] 2026-05-01 11:43:31,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 13:44:35] 2026-05-01 11:43:31,031 | INFO     | collected zombie processes
[2026-05-01 13:44:35] 2026-05-01 11:43:31,031 | INFO     | will attempt to kill all subprocesses of pid=31035
[2026-05-01 13:44:35] 2026-05-01 11:43:31,089 | INFO     | process IDs to be killed: [31035] (in reverse order)
[2026-05-01 13:44:35] 2026-05-01 11:43:32,089 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 13:44:35] 2026-05-01 11:43:32,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 13:44:35] 2026-05-01 11:43:32,091 | INFO     | did not find any defunct processes belonging to 31035
[2026-05-01 13:44:35] 2026-05-01 11:43:32,093 | INFO     | did not find any defunct processes belonging to 31035
[2026-05-01 13:44:35] 2026-05-01 11:43:32,094 | INFO     | Ready for new job
[2026-05-01 13:44:35] 2026-05-01 11:43:32,096 | INFO     | ***************************************
[2026-05-01 13:44:35] 2026-05-01 11:43:32,096 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 13:44:35] 2026-05-01 11:43:32,096 | INFO     | ***************************************
[2026-05-01 13:44:35] 2026-05-01 11:43:32,096 | INFO     | 
[2026-05-01 13:44:35] 2026-05-01 11:43:32,097 | INFO     | pilot is running in a VM
[2026-05-01 13:44:35] 2026-05-01 11:43:32,097 | INFO     | architecture information:
[2026-05-01 13:44:35] 2026-05-01 11:43:32,103 | INFO     | executing command: cat /etc/os-release
[2026-05-01 13:44:35] 2026-05-01 11:43:32,429 | INFO     | cat /etc/os-release:
[2026-05-01 13:44:35] NAME="CentOS Linux"
[2026-05-01 13:44:35] VERSION="7 (Core)"
[2026-05-01 13:44:35] ID="centos"
[2026-05-01 13:44:35] ID_LIKE="rhel fedora"
[2026-05-01 13:44:35] VERSION_ID="7"
[2026-05-01 13:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 13:44:35] ANSI_COLOR="0;31"
[2026-05-01 13:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 13:44:35] HOME_URL="https://www.centos.org/"
[2026-05-01 13:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 13:44:35] 
[2026-05-01 13:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 13:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 13:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 13:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 13:44:35] 
[2026-05-01 13:44:35] 2026-05-01 11:43:32,429 | INFO     | ***************************************
[2026-05-01 13:44:35] 2026-05-01 11:43:32,933 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2026-05-01 13:44:35] 2026-05-01 11:43:33,105 | INFO     | sufficient remaining disk space (495721644032 B)
[2026-05-01 13:44:35] 2026-05-01 11:43:33,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 13:44:35] 2026-05-01 11:43:33,106 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 13:44:35] 2026-05-01 11:43:33,106 | INFO     | update_server=False
[2026-05-01 13:44:35] 2026-05-01 11:43:33,106 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 13:44:35] 2026-05-01 11:43:33,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 13:44:35] 2026-05-01 11:43:34,040 | INFO     | all payload control threads have been joined
[2026-05-01 13:44:35] 2026-05-01 11:43:34,050 | INFO     | all data control threads have been joined
[2026-05-01 13:44:35] 2026-05-01 11:43:34,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:44:35] 2026-05-01 11:43:34,095 | INFO     | aborting loop
[2026-05-01 13:44:35] 2026-05-01 11:43:34,112 | INFO     | [job] retrieve thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:34,237 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:34,355 | INFO     | all job control threads have been joined
[2026-05-01 13:44:35] 2026-05-01 11:43:34,413 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 13:44:35] 2026-05-01 11:43:34,604 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:34,700 | INFO     | [job] validate thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,046 | INFO     | [payload] control thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,056 | INFO     | [data] control thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,101 | INFO     | [job] job monitor thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,115 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,135 | INFO     | [data] copytool_in thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,229 | INFO     | [payload] failed_post thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 13:44:35] 2026-05-01 11:43:35,361 | INFO     | [job] control thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,419 | INFO     | [job] queue monitor thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,536 | INFO     | [payload] validate_post thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:35,788 | INFO     | [data] copytool_out thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:39,242 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:43:43,630 | INFO     | job.realtimelogging is not enabled
[2026-05-01 13:44:35] 2026-05-01 11:43:44,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 13:44:35] 2026-05-01 11:44:02,231 | INFO     | PID=26581 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 13:44:35] 2026-05-01 11:44:02,232 | INFO     | .. there are 2 such processes running
[2026-05-01 13:44:35] 2026-05-01 11:44:02,233 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 13:44:35] 2026-05-01 11:44:02,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 13:44:35] 2026-05-01 11:44:02,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 13:44:35] 2026-05-01 11:44:23,375 | INFO     | [monitor] cgroup control has ended
[2026-05-01 13:44:35] 2026-05-01 11:44:24,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629065840448)>', '<ExcThread(monitor, started 139628623415040)>']
[2026-05-01 13:44:35] 2026-05-01 11:44:25,371 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 13:44:35] 2026-05-01 11:44:25,371 | INFO     | [monitor] control thread has ended
[2026-05-01 13:44:35] 2026-05-01 11:44:29,469 | INFO     | all workflow threads have been joined
[2026-05-01 13:44:35] 2026-05-01 11:44:29,469 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 13:44:35] 2026-05-01 11:44:29,469 | INFO     | traces error code: 0
[2026-05-01 13:44:35] 2026-05-01 11:44:29,469 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 13:44:35] 2026-05-01 11:44:29,826 [wrapper] ==== pilot stdout END ====
[2026-05-01 13:44:35] 2026-05-01 11:44:29,898 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 13:44:35] 2026-05-01 11:44:29,989 [wrapper] pilotpid: 26581
[2026-05-01 13:44:35] 2026-05-01 11:44:30,059 [wrapper] Pilot exit status: 0
[2026-05-01 13:44:35] 2026-05-01 11:44:30,559 [wrapper] pandaids: 7122844373
[2026-05-01 13:44:35] 2026-05-01 11:44:31,583 [wrapper] cleanup supervisor_pilot  6555 26582
[2026-05-01 13:44:35] 2026-05-01 11:44:31,692 [wrapper] Test setup, not cleaning
[2026-05-01 13:44:35] 2026-05-01 11:44:31,739 [wrapper] apfmon messages muted
[2026-05-01 13:44:35] 2026-05-01 11:44:31,855 [wrapper] ==== wrapper stdout END ====
[2026-05-01 13:44:35] 2026-05-01 11:44:31,953 [wrapper] ==== wrapper stderr END ====
[2026-05-01 13:44:35]  *** Error codes and diagnostics ***
[2026-05-01 13:44:35]     "exeErrorCode": 0,
[2026-05-01 13:44:35]     "pilotErrorCode": 0,
[2026-05-01 13:44:35]  *** Listing of results directory ***
[2026-05-01 13:44:35] total 501136
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc    683926 Apr 30 18:53 pilot3.tar.gz
[2026-05-01 13:44:35] -rwx------. 1 boinc boinc     36322 Apr 30 19:21 runpilot2-wrapper.sh
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc      5631 Apr 30 19:21 queuedata.json
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc       100 May  1 08:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 13:44:35] -rwxr-xr-x. 1 boinc boinc      7986 May  1 08:06 run_atlas
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc       105 May  1 08:06 job.xml
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc      6308 May  1 08:06 init_data.xml
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc 319476171 May  1 08:06 EVNT.50017136._000004.pool.root.1
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc     15667 May  1 08:06 start_atlas.sh
[2026-05-01 13:44:35] drwxrwx--x. 2 boinc boinc        68 May  1 08:06 shared
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc    697404 May  1 08:06 input.tar.gz
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc         0 May  1 08:06 boinc_lockfile
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc      2562 May  1 08:06 pandaJob.out
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc       415 May  1 08:12 workernode_map.json
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc   1001806 May  1 08:12 agis_schedconf.cvmfs.json
[2026-05-01 13:44:35] drwx------. 5 boinc boinc      4096 May  1 08:12 pilot3
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc 185012847 May  1 13:41 HITS.50017142._000118.pool.root.1
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc       489 May  1 13:42 boinc_task_state.xml
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc      1012 May  1 13:43 memory_monitor_summary.json
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc   1508687 May  1 13:43 agis_ddmendpoints.agis.ALL.json
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc    452712 May  1 13:43 log.50017142._000118.job.log.tgz.1
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc      6335 May  1 13:43 heartbeat_new.json
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc      6226 May  1 13:43 heartbeat.json
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc        95 May  1 13:44 pilot_heartbeat.json
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc      8192 May  1 13:44 boinc_mmap_file
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc        28 May  1 13:44 wrapper_checkpoint.txt
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc      4956 May  1 13:44 pilotlog.txt
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc   1826465 May  1 13:44 log.50017142._000118.job.log.1
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc       357 May  1 13:44 output.list
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc       410 May  1 13:44 runtime_log
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc   2293760 May  1 13:44 result.tar.gz
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc      8455 May  1 13:44 runtime_log.err
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc       656 May  1 13:44 8f9a2c67c71f.diag
[2026-05-01 13:44:35] -rw-r--r--. 1 boinc boinc     14059 May  1 13:44 stderr.txt
[2026-05-01 13:44:35] HITS file was successfully produced:
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc 185012847 May  1 13:41 shared/HITS.pool.root.1
[2026-05-01 13:44:35]  *** Contents of shared directory: ***
[2026-05-01 13:44:35] total 495612
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc 319476171 May  1 08:06 ATLAS.root_0
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc     15667 May  1 08:06 start_atlas.sh
[2026-05-01 13:44:35] -rw-r--r--. 2 boinc boinc    697404 May  1 08:06 input.tar.gz
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc 185012847 May  1 13:41 HITS.pool.root.1
[2026-05-01 13:44:35] -rw-------. 1 boinc boinc   2293760 May  1 13:44 result.tar.gz
13:44:37 (22606): run_atlas exited; CPU time 74525.887208
13:44:37 (22606): called boinc_finish(0)

</stderr_txt>
]]>

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