Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:28:17 (2113173): wrapper (7.7.26015): starting
02:28:17 (2113173): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 02:28:17] Arguments: --nthreads 4
[2026-05-01 02:28:17] Threads: 4
[2026-05-01 02:28:17] Checking for CVMFS
[2026-05-01 02:28:17] No cvmfs_config command found, will try listing directly
[2026-05-01 02:28:17] CVMFS is ok
[2026-05-01 02:28:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 02:28:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 02:28:17] Further information can be found at the LHC@home message board.
[2026-05-01 02:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 02:28:17] Checking for apptainer binary...
[2026-05-01 02:28:17] which: no apptainer in ((null))
[2026-05-01 02:28:17] apptainer is not installed, using version from CVMFS
[2026-05-01 02:28:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 02:28:17] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/26/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-05-01 02:28:17] apptainer works
[2026-05-01 02:28:17] Set ATHENA_PROC_NUMBER=4
[2026-05-01 02:28:17] Set ATHENA_CORE_NUMBER=4
[2026-05-01 02:28:17] Starting ATLAS job with PandaID=7122841415
[2026-05-01 02:28:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 06:31:04]  *** The last 200 lines of the pilot log: ***
[2026-05-01 06:31:04] 2026-05-01 04:30:02,022 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 06:31:04] 2026-05-01 04:30:03,844 | INFO     | monitor loop #1062: job 0:7122841415 is in state 'finished'
[2026-05-01 06:31:04] 2026-05-01 04:30:03,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,604 | INFO     | job 7122841415 has state=finished
[2026-05-01 06:31:04] 2026-05-01 04:30:04,605 | INFO     | preparing for final server update for job 7122841415 in state='finished'
[2026-05-01 06:31:04] 2026-05-01 04:30:04,605 | INFO     | reading metadata from: /var/lib/boinc/var/slot16/slots/26/PanDA_Pilot-7122841415/jobReport.json
[2026-05-01 06:31:04] 2026-05-01 04:30:04,607 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot16/slots/26/workernode_map.json
[2026-05-01 06:31:04] 2026-05-01 04:30:04,608 | INFO     | this job has now completed (state=finished)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,608 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,608 | INFO     | log transfer has been attempted: DONE
[2026-05-01 06:31:04] 2026-05-01 04:30:04,608 | INFO     | job 7122841415 has finished - writing final server update
[2026-05-01 06:31:04] 2026-05-01 04:30:04,608 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1371500/.job.ad'
[2026-05-01 06:31:04] 2026-05-01 04:30:04,609 | INFO     | total number of processed events: 400 (read)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,620 | INFO     | using path: /var/lib/boinc/var/slot16/slots/26/PanDA_Pilot-7122841415/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,621 | INFO     | extracted standard info from prmon json
[2026-05-01 06:31:04] 2026-05-01 04:30:04,621 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 06:31:04] 2026-05-01 04:30:04,621 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 06:31:04] 2026-05-01 04:30:04,621 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 06:31:04] 2026-05-01 04:30:04,625 | INFO     | fitting pss+swap vs Time
[2026-05-01 06:31:04] 2026-05-01 04:30:04,626 | INFO     | sum of square deviations: 4127772278.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,627 | INFO     | sum of deviations: 2426165627.0000033
[2026-05-01 06:31:04] 2026-05-01 04:30:04,627 | INFO     | mean x (centered): 0.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,627 | INFO     | mean y: 2348321.9029535865
[2026-05-01 06:31:04] 2026-05-01 04:30:04,628 | INFO     | intersect: 2348321.9029535865
[2026-05-01 06:31:04] 2026-05-01 04:30:04,628 | INFO     | chi2: 1.39795577331291
[2026-05-01 06:31:04] 2026-05-01 04:30:04,628 | INFO     | sum of square deviations: 3871990738.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,630 | INFO     | sum of deviations: 2327000001.0000024
[2026-05-01 06:31:04] 2026-05-01 04:30:04,630 | INFO     | mean x (centered): 0.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,630 | INFO     | mean y: 2348262.7672413792
[2026-05-01 06:31:04] 2026-05-01 04:30:04,630 | INFO     | intersect: 2348262.7672413792
[2026-05-01 06:31:04] 2026-05-01 04:30:04,631 | INFO     | chi2: 1.3980260866633711
[2026-05-01 06:31:04] 2026-05-01 04:30:04,631 | INFO     | current chi2=1.3980260866633711 (change=-0.0050297263907368335 %)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,631 | INFO     | right removable region: 231
[2026-05-01 06:31:04] 2026-05-01 04:30:04,631 | INFO     | sum of square deviations: 3871990738.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,633 | INFO     | sum of deviations: -27663565025.999992
[2026-05-01 06:31:04] 2026-05-01 04:30:04,633 | INFO     | mean x (centered): 0.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,633 | INFO     | mean y: 2366060.4482758623
[2026-05-01 06:31:04] 2026-05-01 04:30:04,633 | INFO     | intersect: 2366060.4482758623
[2026-05-01 06:31:04] 2026-05-01 04:30:04,633 | INFO     | chi2: 0.07126452281847169
[2026-05-01 06:31:04] 2026-05-01 04:30:04,634 | INFO     | current chi2=0.07126452281847169 (change=94.90223337684087 %)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,634 | INFO     | sum of square deviations: 3627000098.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,635 | INFO     | sum of deviations: -23215488335.999996
[2026-05-01 06:31:04] 2026-05-01 04:30:04,635 | INFO     | mean x (centered): 0.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,636 | INFO     | mean y: 2363287.845814978
[2026-05-01 06:31:04] 2026-05-01 04:30:04,636 | INFO     | intersect: 2363287.845814978
[2026-05-01 06:31:04] 2026-05-01 04:30:04,636 | INFO     | chi2: 0.06573661107748963
[2026-05-01 06:31:04] 2026-05-01 04:30:04,636 | INFO     | current chi2=0.06573661107748963 (change=7.756891539234771 %)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,636 | INFO     | left removable region: 10
[2026-05-01 06:31:04] 2026-05-01 04:30:04,637 | INFO     | sum of square deviations: 3346927870.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,638 | INFO     | sum of deviations: -22708018539.000008
[2026-05-01 06:31:04] 2026-05-01 04:30:04,638 | INFO     | mean x (centered): 0.0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,638 | INFO     | mean y: 2363619.4977375567
[2026-05-01 06:31:04] 2026-05-01 04:30:04,638 | INFO     | intersect: 2363619.4977375567
[2026-05-01 06:31:04] 2026-05-01 04:30:04,639 | INFO     | chi2: 0.0645870378978858
[2026-05-01 06:31:04] 2026-05-01 04:30:04,639 | INFO     | current memory leak: -6.78 B/s (using 221 data points, chi2=0.06)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,639 | INFO     | could have reported an average CPU frequency of 2526 MHz (12 samples)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,639 | INFO     | ..............................
[2026-05-01 06:31:04] 2026-05-01 04:30:04,639 | INFO     | . Timing measurements:
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . get job = 0 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . initial setup = 5 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . payload setup = 9 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . stage-in = 0 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . payload execution = 14458 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . stage-out = 1 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | . log creation = 0 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,640 | INFO     | ..............................
[2026-05-01 06:31:04] 2026-05-01 04:30:04,734 | INFO     | 
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | job summary report
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | --------------------------------------------------
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | PanDA job id: 7122841415
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | task id: 50017163
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | errors: (none)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | pilot state: finished 
[2026-05-01 06:31:04] 2026-05-01 04:30:04,735 | INFO     | transexitcode: 0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | exeerrorcode: 0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | exeerrordiag: 
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | exitcode: 0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | exitmsg: OK
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | cpuconsumptiontime: 56000 s
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | nevents: 400
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | neventsw: 0
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | pid: 2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | pgrp: 2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | corecount: 4
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | event service: False
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | sizes: {0: 2275854, 1: 2278352, 12: 2278352, 14471: 2309117, 14474: 2318139, 14476: 2318195, 14479: 2318517}
[2026-05-01 06:31:04] 2026-05-01 04:30:04,736 | INFO     | --------------------------------------------------
[2026-05-01 06:31:04] 2026-05-01 04:30:04,737 | INFO     | 
[2026-05-01 06:31:04] 2026-05-01 04:30:04,737 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/26
[2026-05-01 06:31:04] 2026-05-01 04:30:04,761 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,762 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | job 7122841415 has completed (purged errors)
[2026-05-01 06:31:04] 2026-05-01 04:30:04,763 | INFO     | overall cleanup function is called
[2026-05-01 06:31:04] 2026-05-01 04:30:05,771 | INFO     | --- collectZombieJob: --- 10, [2122217]
[2026-05-01 06:31:04] 2026-05-01 04:30:05,772 | INFO     | zombie collector waiting for pid 2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:05,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 06:31:04] 2026-05-01 04:30:05,772 | INFO     | collected zombie processes
[2026-05-01 06:31:04] 2026-05-01 04:30:05,772 | INFO     | will attempt to kill all subprocesses of pid=2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:06,064 | INFO     | process IDs to be killed: [2122217] (in reverse order)
[2026-05-01 06:31:04] 2026-05-01 04:30:06,185 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 06:31:04] 2026-05-01 04:30:06,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 06:31:04] 2026-05-01 04:30:06,197 | INFO     | did not find any defunct processes belonging to 2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:06,209 | INFO     | did not find any defunct processes belonging to 2122217
[2026-05-01 06:31:04] 2026-05-01 04:30:06,209 | INFO     | Ready for new job
[2026-05-01 06:31:04] 2026-05-01 04:30:06,211 | INFO     | ***************************************
[2026-05-01 06:31:04] 2026-05-01 04:30:06,211 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 06:31:04] 2026-05-01 04:30:06,212 | INFO     | ***************************************
[2026-05-01 06:31:04] 2026-05-01 04:30:06,212 | INFO     | 
[2026-05-01 06:31:04] 2026-05-01 04:30:06,216 | INFO     | architecture information:
[2026-05-01 06:31:04] 2026-05-01 04:30:06,216 | INFO     | executing command: cat /etc/os-release
[2026-05-01 06:31:04] 2026-05-01 04:30:06,231 | INFO     | cat /etc/os-release:
[2026-05-01 06:31:04] NAME="CentOS Linux"
[2026-05-01 06:31:04] VERSION="7 (Core)"
[2026-05-01 06:31:04] ID="centos"
[2026-05-01 06:31:04] ID_LIKE="rhel fedora"
[2026-05-01 06:31:04] VERSION_ID="7"
[2026-05-01 06:31:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 06:31:04] ANSI_COLOR="0;31"
[2026-05-01 06:31:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 06:31:04] HOME_URL="https://www.centos.org/"
[2026-05-01 06:31:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 06:31:04] 
[2026-05-01 06:31:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 06:31:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 06:31:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 06:31:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 06:31:04] 
[2026-05-01 06:31:04] 2026-05-01 04:30:06,231 | INFO     | ***************************************
[2026-05-01 06:31:04] 2026-05-01 04:30:06,734 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/26
[2026-05-01 06:31:04] 2026-05-01 04:30:06,751 | INFO     | sufficient remaining disk space (26717716480 B)
[2026-05-01 06:31:04] 2026-05-01 04:30:06,752 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 06:31:04] 2026-05-01 04:30:06,752 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 06:31:04] 2026-05-01 04:30:06,752 | INFO     | update_server=False
[2026-05-01 06:31:04] 2026-05-01 04:30:06,752 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 06:31:04] 2026-05-01 04:30:06,956 | INFO     | all payload control threads have been joined
[2026-05-01 06:31:04] 2026-05-01 04:30:07,045 | INFO     | all job control threads have been joined
[2026-05-01 06:31:04] 2026-05-01 04:30:07,352 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 06:31:04] 2026-05-01 04:30:07,353 | INFO     | aborting loop
[2026-05-01 06:31:04] 2026-05-01 04:30:07,708 | INFO     | all data control threads have been joined
[2026-05-01 06:31:04] 2026-05-01 04:30:07,738 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 06:31:04] 2026-05-01 04:30:07,757 | INFO     | [job] retrieve thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:07,961 | INFO     | [payload] control thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,050 | INFO     | [job] control thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,062 | INFO     | [payload] validate_post thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 06:31:04] 2026-05-01 04:30:08,154 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,357 | INFO     | [job] job monitor thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,358 | INFO     | [job] validate thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,486 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,570 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,713 | INFO     | [data] control thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:08,875 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:09,021 | INFO     | [payload] failed_post thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:09,101 | INFO     | [data] copytool_in thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:09,743 | INFO     | [data] copytool_out thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:09,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 06:31:04] 2026-05-01 04:30:10,764 | INFO     | [job] queue monitor thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:12,122 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 06:31:04] 2026-05-01 04:30:36,406 | INFO     | PID=2117414 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 06:31:04] 2026-05-01 04:30:36,406 | INFO     | .. there are 13 such processes running
[2026-05-01 06:31:04] 2026-05-01 04:30:36,406 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 06:31:04] 2026-05-01 04:30:36,407 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 06:31:04] 2026-05-01 04:30:36,407 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 06:31:04] 2026-05-01 04:30:58,069 | INFO     | [monitor] cgroup control has ended
[2026-05-01 06:31:04] 2026-05-01 04:30:58,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22806922520384)>', '<ExcThread(monitor, started 22806690813696)>']
[2026-05-01 06:31:04] 2026-05-01 04:30:59,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 06:31:04] 2026-05-01 04:30:59,522 | INFO     | [monitor] control thread has ended
[2026-05-01 06:31:04] 2026-05-01 04:31:03,739 | INFO     | all workflow threads have been joined
[2026-05-01 06:31:04] 2026-05-01 04:31:03,740 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 06:31:04] 2026-05-01 04:31:03,741 | INFO     | traces error code: 0
[2026-05-01 06:31:04] 2026-05-01 04:31:03,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 06:31:04] 2026-05-01 04:31:03,903 [wrapper] ==== pilot stdout END ====
[2026-05-01 06:31:04] 2026-05-01 04:31:03,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 06:31:04] 2026-05-01 04:31:03,909 [wrapper] pilotpid: 2117414
[2026-05-01 06:31:04] 2026-05-01 04:31:03,912 [wrapper] Pilot exit status: 0
[2026-05-01 06:31:04] 2026-05-01 04:31:03,923 [wrapper] pandaids: 7122841415
[2026-05-01 06:31:04] 2026-05-01 04:31:03,995 [wrapper] cleanup supervisor_pilot 2423219 2117415
[2026-05-01 06:31:04] 2026-05-01 04:31:03,998 [wrapper] Test setup, not cleaning
[2026-05-01 06:31:04] 2026-05-01 04:31:04,001 [wrapper] apfmon messages muted
[2026-05-01 06:31:04] 2026-05-01 04:31:04,004 [wrapper] ==== wrapper stdout END ====
[2026-05-01 06:31:04] 2026-05-01 04:31:04,006 [wrapper] ==== wrapper stderr END ====
[2026-05-01 06:31:04]  *** Error codes and diagnostics ***
[2026-05-01 06:31:04]     "exeErrorCode": 0,
[2026-05-01 06:31:04]     "pilotErrorCode": 0,
[2026-05-01 06:31:04]  *** Listing of results directory ***
[2026-05-01 06:31:04] total 493032
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc    683926 Apr 30 18:53 pilot3.tar.gz
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc      5631 Apr 30 18:56 queuedata.json
[2026-05-01 06:31:04] -rwx------. 1 boinc boinc     36322 Apr 30 18:57 runpilot2-wrapper.sh
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc       100 May  1 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 06:31:04] -rwxr-xr-x. 1 boinc boinc      7986 May  1 02:28 run_atlas
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc       105 May  1 02:28 job.xml
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc      6482 May  1 02:28 init_data.xml
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc 324368370 May  1 02:28 EVNT.50017157._000010.pool.root.1
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc     15667 May  1 02:28 start_atlas.sh
[2026-05-01 06:31:04] drwxrwx--x. 2 boinc boinc      4096 May  1 02:28 shared
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc    697398 May  1 02:28 input.tar.gz
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc         0 May  1 02:28 boinc_lockfile
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc      2528 May  1 02:28 pandaJob.out
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc   1001806 May  1 02:28 agis_schedconf.cvmfs.json
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc       452 May  1 02:28 workernode_map.json
[2026-05-01 06:31:04] drwx------. 5 boinc boinc      4096 May  1 02:28 pilot3
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc 172956831 May  1 06:29 HITS.50017163._000230.pool.root.1
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc       488 May  1 06:29 boinc_task_state.xml
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc        95 May  1 06:29 pilot_heartbeat.json
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc      1035 May  1 06:29 memory_monitor_summary.json
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc   1510091 May  1 06:29 agis_ddmendpoints.agis.ALL.json
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc    332994 May  1 06:29 log.50017163._000230.job.log.tgz.1
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc      6420 May  1 06:30 heartbeat_new.json
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc      6311 May  1 06:30 heartbeat.json
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc      8192 May  1 06:31 boinc_mmap_file
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc        28 May  1 06:31 wrapper_checkpoint.txt
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc      4833 May  1 06:31 pilotlog.txt
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc   1364602 May  1 06:31 log.50017163._000230.job.log.1
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc       357 May  1 06:31 output.list
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc       410 May  1 06:31 runtime_log
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc   1720320 May  1 06:31 result.tar.gz
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc      8845 May  1 06:31 runtime_log.err
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc       665 May  1 06:31 89fbd539fe17.diag
[2026-05-01 06:31:04] -rw-r--r--. 1 boinc boinc     21126 May  1 06:31 stderr.txt
[2026-05-01 06:31:04] HITS file was successfully produced:
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc 172956831 May  1 06:29 shared/HITS.pool.root.1
[2026-05-01 06:31:04]  *** Contents of shared directory: ***
[2026-05-01 06:31:04] total 488060
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc 324368370 May  1 02:28 ATLAS.root_0
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc     15667 May  1 02:28 start_atlas.sh
[2026-05-01 06:31:04] -rw-r--r--. 2 boinc boinc    697398 May  1 02:28 input.tar.gz
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc 172956831 May  1 06:29 HITS.pool.root.1
[2026-05-01 06:31:04] -rw-------. 1 boinc boinc   1720320 May  1 06:31 result.tar.gz
06:31:05 (2113173): run_atlas exited; CPU time 56512.992414
06:31:05 (2113173): called boinc_finish(0)

</stderr_txt>
]]>

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