Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:18 (1744344): wrapper (7.7.26015): starting
22:04:18 (1744344): wrapper: running run_atlas (--nthreads 4)
[2026-04-30 22:04:18] Arguments: --nthreads 4
[2026-04-30 22:04:18] Threads: 4
[2026-04-30 22:04:18] Checking for CVMFS
[2026-04-30 22:04:18] No cvmfs_config command found, will try listing directly
[2026-04-30 22:04:18] CVMFS is ok
[2026-04-30 22:04:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 22:04:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 22:04:18] Further information can be found at the LHC@home message board.
[2026-04-30 22:04:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 22:04:18] Checking for apptainer binary...
[2026-04-30 22:04:18] which: no apptainer in ((null))
[2026-04-30 22:04:18] apptainer is not installed, using version from CVMFS
[2026-04-30 22:04:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 22:04:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot16/slots/26/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2026-04-30 22:04:18] apptainer works
[2026-04-30 22:04:18] Set ATHENA_PROC_NUMBER=4
[2026-04-30 22:04:18] Set ATHENA_CORE_NUMBER=4
[2026-04-30 22:04:18] Starting ATLAS job with PandaID=7122823854
[2026-04-30 22:04:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot16/slots/26 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 02:28:06]  *** The last 200 lines of the pilot log: ***
[2026-05-01 02:28:06] 2026-05-01 00:27:04,161 | INFO     | right removable region: 252
[2026-05-01 02:28:06] 2026-05-01 00:27:04,161 | INFO     | sum of square deviations: 5021496942.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,163 | INFO     | sum of deviations: 5115864552.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,164 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,164 | INFO     | mean y: 2349255.4743083003
[2026-05-01 02:28:06] 2026-05-01 00:27:04,164 | INFO     | intersect: 2349255.4743083003
[2026-05-01 02:28:06] 2026-05-01 00:27:04,164 | INFO     | chi2: 0.015513191035426427
[2026-05-01 02:28:06] 2026-05-01 00:27:04,164 | INFO     | current chi2=0.015513191035426427 (change=98.78658486979107 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,165 | INFO     | sum of square deviations: 4729621702.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,167 | INFO     | sum of deviations: 8460789486.999998
[2026-05-01 02:28:06] 2026-05-01 00:27:04,167 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,167 | INFO     | mean y: 2347491.064516129
[2026-05-01 02:28:06] 2026-05-01 00:27:04,167 | INFO     | intersect: 2347491.064516129
[2026-05-01 02:28:06] 2026-05-01 00:27:04,168 | INFO     | chi2: 0.0007390529399017519
[2026-05-01 02:28:06] 2026-05-01 00:27:04,168 | INFO     | current chi2=0.0007390529399017519 (change=95.23597087011933 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,168 | INFO     | sum of square deviations: 4449281562.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,170 | INFO     | sum of deviations: 7174014312.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,170 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,170 | INFO     | mean y: 2348190.7119341563
[2026-05-01 02:28:06] 2026-05-01 00:27:04,171 | INFO     | intersect: 2348190.7119341563
[2026-05-01 02:28:06] 2026-05-01 00:27:04,171 | INFO     | chi2: 0.0003068605564400915
[2026-05-01 02:28:06] 2026-05-01 00:27:04,171 | INFO     | current chi2=0.0003068605564400915 (change=58.479218487259544 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,172 | INFO     | sum of square deviations: 4180243959.5
[2026-05-01 02:28:06] 2026-05-01 00:27:04,173 | INFO     | sum of deviations: 6250257579.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,173 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,174 | INFO     | mean y: 2348714.848739496
[2026-05-01 02:28:06] 2026-05-01 00:27:04,174 | INFO     | intersect: 2348714.848739496
[2026-05-01 02:28:06] 2026-05-01 00:27:04,174 | INFO     | chi2: 0.00012812039892877788
[2026-05-01 02:28:06] 2026-05-01 00:27:04,174 | INFO     | current chi2=0.00012812039892877788 (change=58.248006711872435 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,175 | INFO     | sum of square deviations: 3922276332.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,176 | INFO     | sum of deviations: 5607341857.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,177 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,177 | INFO     | mean y: 2349094.416309013
[2026-05-01 02:28:06] 2026-05-01 00:27:04,177 | INFO     | intersect: 2349094.416309013
[2026-05-01 02:28:06] 2026-05-01 00:27:04,177 | INFO     | chi2: 7.372939918787068e-05
[2026-05-01 02:28:06] 2026-05-01 00:27:04,177 | INFO     | current chi2=7.372939918787068e-05 (change=42.45303651539764 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,178 | INFO     | sum of square deviations: 3675146117.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,179 | INFO     | sum of deviations: 5234849017.000001
[2026-05-01 02:28:06] 2026-05-01 00:27:04,179 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,180 | INFO     | mean y: 2349323.8333333335
[2026-05-01 02:28:06] 2026-05-01 00:27:04,180 | INFO     | intersect: 2349323.8333333335
[2026-05-01 02:28:06] 2026-05-01 00:27:04,180 | INFO     | chi2: 6.690367317890638e-05
[2026-05-01 02:28:06] 2026-05-01 00:27:04,180 | INFO     | current chi2=6.690367317890638e-05 (change=9.257807718697922 %)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,180 | INFO     | left removable region: 30
[2026-05-01 02:28:06] 2026-05-01 00:27:04,181 | INFO     | sum of square deviations: 3392567795.5
[2026-05-01 02:28:06] 2026-05-01 00:27:04,182 | INFO     | sum of deviations: 4863638031.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,183 | INFO     | mean x (centered): 0.0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,183 | INFO     | mean y: 2349083.4594594594
[2026-05-01 02:28:06] 2026-05-01 00:27:04,183 | INFO     | intersect: 2349083.4594594594
[2026-05-01 02:28:06] 2026-05-01 00:27:04,183 | INFO     | chi2: 6.606111195345709e-05
[2026-05-01 02:28:06] 2026-05-01 00:27:04,183 | INFO     | current memory leak: 1.43 B/s (using 222 data points, chi2=0.00)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,184 | INFO     | could have reported an average CPU frequency of 2524 MHz (12 samples)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,184 | INFO     | ..............................
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . Timing measurements:
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . get job = 0 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . initial setup = 5 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . payload setup = 10 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . stage-in = 0 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . payload execution = 15722 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . stage-out = 1 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | . log creation = 0 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,185 | INFO     | ..............................
[2026-05-01 02:28:06] 2026-05-01 00:27:04,281 | INFO     | 
[2026-05-01 02:28:06] 2026-05-01 00:27:04,281 | INFO     | job summary report
[2026-05-01 02:28:06] 2026-05-01 00:27:04,281 | INFO     | --------------------------------------------------
[2026-05-01 02:28:06] 2026-05-01 00:27:04,281 | INFO     | PanDA job id: 7122823854
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | task id: 50016984
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | errors: (none)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | pilot state: finished 
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | transexitcode: 0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | exeerrorcode: 0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | exeerrordiag: 
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | exitcode: 0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | exitmsg: OK
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | cpuconsumptiontime: 60687 s
[2026-05-01 02:28:06] 2026-05-01 00:27:04,282 | INFO     | nevents: 400
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | neventsw: 0
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | pid: 1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | pgrp: 1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | corecount: 4
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | event service: False
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | sizes: {0: 2276694, 1: 2278324, 11: 2278352, 15736: 2309488, 15737: 2318510, 15738: 2318888}
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | --------------------------------------------------
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | 
[2026-05-01 02:28:06] 2026-05-01 00:27:04,283 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot16/slots/26
[2026-05-01 02:28:06] 2026-05-01 00:27:04,294 | INFO     | number of running child processes to parent process 1752948: 1
[2026-05-01 02:28:06] 2026-05-01 00:27:04,294 | INFO     | maximum number of monitored processes: 6
[2026-05-01 02:28:06] 2026-05-01 00:27:04,295 | INFO     | aborting job monitoring since job object (job id=7122823854) has expired
[2026-05-01 02:28:06] 2026-05-01 00:27:04,304 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 02:28:06] 2026-05-01 00:27:04,306 | INFO     | job 7122823854 has completed (purged errors)
[2026-05-01 02:28:06] 2026-05-01 00:27:04,307 | INFO     | overall cleanup function is called
[2026-05-01 02:28:06] 2026-05-01 00:27:05,315 | INFO     | --- collectZombieJob: --- 10, [1752948]
[2026-05-01 02:28:06] 2026-05-01 00:27:05,315 | INFO     | zombie collector waiting for pid 1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:05,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 02:28:06] 2026-05-01 00:27:05,315 | INFO     | collected zombie processes
[2026-05-01 02:28:06] 2026-05-01 00:27:05,315 | INFO     | will attempt to kill all subprocesses of pid=1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:05,596 | INFO     | process IDs to be killed: [1752948] (in reverse order)
[2026-05-01 02:28:06] 2026-05-01 00:27:05,716 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 02:28:06] 2026-05-01 00:27:05,717 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 02:28:06] 2026-05-01 00:27:05,728 | INFO     | did not find any defunct processes belonging to 1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:05,738 | INFO     | did not find any defunct processes belonging to 1752948
[2026-05-01 02:28:06] 2026-05-01 00:27:05,739 | INFO     | Ready for new job
[2026-05-01 02:28:06] 2026-05-01 00:27:05,741 | INFO     | ***************************************
[2026-05-01 02:28:06] 2026-05-01 00:27:05,741 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 02:28:06] 2026-05-01 00:27:05,741 | INFO     | ***************************************
[2026-05-01 02:28:06] 2026-05-01 00:27:05,741 | INFO     | 
[2026-05-01 02:28:06] 2026-05-01 00:27:05,745 | INFO     | architecture information:
[2026-05-01 02:28:06] 2026-05-01 00:27:05,746 | INFO     | executing command: cat /etc/os-release
[2026-05-01 02:28:06] 2026-05-01 00:27:05,760 | INFO     | cat /etc/os-release:
[2026-05-01 02:28:06] NAME="CentOS Linux"
[2026-05-01 02:28:06] VERSION="7 (Core)"
[2026-05-01 02:28:06] ID="centos"
[2026-05-01 02:28:06] ID_LIKE="rhel fedora"
[2026-05-01 02:28:06] VERSION_ID="7"
[2026-05-01 02:28:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 02:28:06] ANSI_COLOR="0;31"
[2026-05-01 02:28:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 02:28:06] HOME_URL="https://www.centos.org/"
[2026-05-01 02:28:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 02:28:06] 
[2026-05-01 02:28:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 02:28:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 02:28:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 02:28:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 02:28:06] 
[2026-05-01 02:28:06] 2026-05-01 00:27:05,760 | INFO     | ***************************************
[2026-05-01 02:28:06] 2026-05-01 00:27:06,263 | INFO     | executing command: df -mP /var/lib/boinc/var/slot16/slots/26
[2026-05-01 02:28:06] 2026-05-01 00:27:06,278 | INFO     | sufficient remaining disk space (20930625536 B)
[2026-05-01 02:28:06] 2026-05-01 00:27:06,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 02:28:06] 2026-05-01 00:27:06,279 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 02:28:06] 2026-05-01 00:27:06,279 | INFO     | update_server=False
[2026-05-01 02:28:06] 2026-05-01 00:27:06,279 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 02:28:06] 2026-05-01 00:27:06,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 02:28:06] 2026-05-01 00:27:06,280 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 02:28:06] 2026-05-01 00:27:06,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 02:28:06] 2026-05-01 00:27:06,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 02:28:06] 2026-05-01 00:27:06,280 | INFO     | aborting loop
[2026-05-01 02:28:06] 2026-05-01 00:27:06,528 | INFO     | all data control threads have been joined
[2026-05-01 02:28:06] 2026-05-01 00:27:06,673 | INFO     | all payload control threads have been joined
[2026-05-01 02:28:06] 2026-05-01 00:27:07,285 | INFO     | [job] retrieve thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,285 | INFO     | [job] queue monitor thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,286 | INFO     | [job] job monitor thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,337 | INFO     | all job control threads have been joined
[2026-05-01 02:28:06] 2026-05-01 00:27:07,495 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,533 | INFO     | [data] control thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,555 | INFO     | [job] validate thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,612 | INFO     | [payload] validate_post thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,676 | INFO     | [payload] control thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,868 | INFO     | [payload] failed_post thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:07,971 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:08,285 | INFO     | [data] copytool_out thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:08,342 | INFO     | [job] control thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:08,622 | INFO     | [data] copytool_in thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:08,716 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:10,285 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:16,880 | INFO     | job.realtimelogging is not enabled
[2026-05-01 02:28:06] 2026-05-01 00:27:17,885 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 02:28:06] 2026-05-01 00:27:37,244 | INFO     | PID=1748126 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 02:28:06] 2026-05-01 00:27:37,244 | INFO     | .. there are 14 such processes running
[2026-05-01 02:28:06] 2026-05-01 00:27:37,245 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 02:28:06] 2026-05-01 00:27:37,246 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 02:28:06] 2026-05-01 00:27:37,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 02:28:06] 2026-05-01 00:28:00,125 | INFO     | [monitor] cgroup control has ended
[2026-05-01 02:28:06] 2026-05-01 00:28:01,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22619558123328)>', '<ExcThread(monitor, started 22619243935488)>']
[2026-05-01 02:28:06] 2026-05-01 00:28:01,352 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 02:28:06] 2026-05-01 00:28:01,353 | INFO     | [monitor] control thread has ended
[2026-05-01 02:28:06] 2026-05-01 00:28:06,138 | INFO     | all workflow threads have been joined
[2026-05-01 02:28:06] 2026-05-01 00:28:06,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 02:28:06] 2026-05-01 00:28:06,139 | INFO     | traces error code: 0
[2026-05-01 02:28:06] 2026-05-01 00:28:06,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 02:28:06] 2026-05-01 00:28:06,310 [wrapper] ==== pilot stdout END ====
[2026-05-01 02:28:06] 2026-05-01 00:28:06,313 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 02:28:06] 2026-05-01 00:28:06,315 [wrapper] pilotpid: 1748126
[2026-05-01 02:28:06] 2026-05-01 00:28:06,318 [wrapper] Pilot exit status: 0
[2026-05-01 02:28:06] 2026-05-01 00:28:06,330 [wrapper] pandaids: 7122823854
[2026-05-01 02:28:06] 2026-05-01 00:28:06,400 [wrapper] cleanup supervisor_pilot 2096246 1748127
[2026-05-01 02:28:06] 2026-05-01 00:28:06,404 [wrapper] Test setup, not cleaning
[2026-05-01 02:28:06] 2026-05-01 00:28:06,407 [wrapper] apfmon messages muted
[2026-05-01 02:28:06] 2026-05-01 00:28:06,409 [wrapper] ==== wrapper stdout END ====
[2026-05-01 02:28:06] 2026-05-01 00:28:06,412 [wrapper] ==== wrapper stderr END ====
[2026-05-01 02:28:06]  *** Error codes and diagnostics ***
[2026-05-01 02:28:06]     "exeErrorCode": 0,
[2026-05-01 02:28:06]     "pilotErrorCode": 0,
[2026-05-01 02:28:06]  *** Listing of results directory ***
[2026-05-01 02:28:06] total 503932
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc    683926 Apr 30 17:01 pilot3.tar.gz
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc      5631 Apr 30 17:43 queuedata.json
[2026-05-01 02:28:06] -rwx------. 1 boinc boinc     36322 Apr 30 17:44 runpilot2-wrapper.sh
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc       100 Apr 30 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 02:28:06] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 22:04 run_atlas
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc       105 Apr 30 22:04 job.xml
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc 323202686 Apr 30 22:04 EVNT.50016980._000025.pool.root.1
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc      6482 Apr 30 22:04 init_data.xml
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:04 start_atlas.sh
[2026-05-01 02:28:06] drwxrwx--x. 2 boinc boinc      4096 Apr 30 22:04 shared
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc    697394 Apr 30 22:04 input.tar.gz
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc         0 Apr 30 22:04 boinc_lockfile
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc      2527 Apr 30 22:04 pandaJob.out
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc    997594 Apr 30 22:04 agis_schedconf.cvmfs.json
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc       452 Apr 30 22:04 workernode_map.json
[2026-05-01 02:28:06] drwx------. 5 boinc boinc      4096 Apr 30 22:04 pilot3
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc 184998858 May  1 02:26 HITS.50016984._000617.pool.root.1
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc       488 May  1 02:26 boinc_task_state.xml
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc      1033 May  1 02:26 memory_monitor_summary.json
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc   1510091 May  1 02:27 agis_ddmendpoints.agis.ALL.json
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc    358152 May  1 02:27 log.50016984._000617.job.log.tgz.1
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc      6419 May  1 02:27 heartbeat_new.json
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc      6310 May  1 02:27 heartbeat.json
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc      8192 May  1 02:27 boinc_mmap_file
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc        28 May  1 02:27 wrapper_checkpoint.txt
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc        95 May  1 02:27 pilot_heartbeat.json
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc      4905 May  1 02:28 pilotlog.txt
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc   1489195 May  1 02:28 log.50016984._000617.job.log.1
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc       357 May  1 02:28 output.list
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc       410 May  1 02:28 runtime_log
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc   1863680 May  1 02:28 result.tar.gz
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc      8845 May  1 02:28 runtime_log.err
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc       665 May  1 02:28 78c2189fa444.diag
[2026-05-01 02:28:06] -rw-r--r--. 1 boinc boinc     20661 May  1 02:28 stderr.txt
[2026-05-01 02:28:06] HITS file was successfully produced:
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc 184998858 May  1 02:26 shared/HITS.pool.root.1
[2026-05-01 02:28:06]  *** Contents of shared directory: ***
[2026-05-01 02:28:06] total 498820
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc 323202686 Apr 30 22:04 ATLAS.root_0
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:04 start_atlas.sh
[2026-05-01 02:28:06] -rw-r--r--. 2 boinc boinc    697394 Apr 30 22:04 input.tar.gz
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc 184998858 May  1 02:26 HITS.pool.root.1
[2026-05-01 02:28:06] -rw-------. 1 boinc boinc   1863680 May  1 02:28 result.tar.gz
02:28:08 (1744344): run_atlas exited; CPU time 61230.042031
02:28:08 (1744344): called boinc_finish(0)

</stderr_txt>
]]>

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