Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:29:14 (1532851): wrapper (7.7.26015): starting
19:29:14 (1532851): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 19:29:14] Arguments: --nthreads 4
[2026-05-01 19:29:14] Threads: 4
[2026-05-01 19:29:14] Checking for CVMFS
[2026-05-01 19:29:14] No cvmfs_config command found, will try listing directly
[2026-05-01 19:29:14] CVMFS is ok
[2026-05-01 19:29:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 19:29:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 19:29:14] Further information can be found at the LHC@home message board.
[2026-05-01 19:29:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 19:29:14] Checking for apptainer binary...
[2026-05-01 19:29:14] which: no apptainer in ((null))
[2026-05-01 19:29:14] apptainer is not installed, using version from CVMFS
[2026-05-01 19:29:14] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 19:29:14] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-01 19:29:14] apptainer works
[2026-05-01 19:29:14] Set ATHENA_PROC_NUMBER=4
[2026-05-01 19:29:14] Set ATHENA_CORE_NUMBER=4
[2026-05-01 19:29:14] Starting ATLAS job with PandaID=7122776657
[2026-05-01 19:29:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 22:55:00]  *** The last 200 lines of the pilot log: ***
[2026-05-01 22:55:00] 2026-05-01 20:54:14,959 | INFO     | maximum number of monitored processes: 6
[2026-05-01 22:55:00] 2026-05-01 20:54:16,984 | INFO     | job 7122776657 has state=finished
[2026-05-01 22:55:00] 2026-05-01 20:54:16,984 | INFO     | preparing for final server update for job 7122776657 in state='finished'
[2026-05-01 22:55:00] 2026-05-01 20:54:16,984 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7122776657/jobReport.json
[2026-05-01 22:55:00] 2026-05-01 20:54:16,987 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/0/workernode_map.json
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | INFO     | this job has now completed (state=finished)
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | INFO     | log transfer has been attempted: DONE
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | INFO     | job 7122776657 has finished - writing final server update
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3891972/.job.ad'
[2026-05-01 22:55:00] 2026-05-01 20:54:16,988 | INFO     | total number of processed events: 400 (read)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,001 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7122776657/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,001 | INFO     | extracted standard info from prmon json
[2026-05-01 22:55:00] 2026-05-01 20:54:17,001 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 22:55:00] 2026-05-01 20:54:17,002 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 22:55:00] 2026-05-01 20:54:17,002 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 22:55:00] 2026-05-01 20:54:17,010 | INFO     | fitting pss+swap vs Time
[2026-05-01 22:55:00] 2026-05-01 20:54:17,011 | INFO     | sum of square deviations: 2518000700.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,012 | INFO     | sum of deviations: 9037958859.999994
[2026-05-01 22:55:00] 2026-05-01 20:54:17,012 | INFO     | mean x (centered): 0.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,012 | INFO     | mean y: 2345742.6666666665
[2026-05-01 22:55:00] 2026-05-01 20:54:17,012 | INFO     | intersect: 2345742.6666666665
[2026-05-01 22:55:00] 2026-05-01 20:54:17,013 | INFO     | chi2: 1.3845293774209881
[2026-05-01 22:55:00] 2026-05-01 20:54:17,013 | INFO     | sum of square deviations: 2334722845.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,014 | INFO     | sum of deviations: 8800754168.499998
[2026-05-01 22:55:00] 2026-05-01 20:54:17,014 | INFO     | mean x (centered): 0.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,014 | INFO     | mean y: 2345545.2908163266
[2026-05-01 22:55:00] 2026-05-01 20:54:17,015 | INFO     | intersect: 2345545.2908163266
[2026-05-01 22:55:00] 2026-05-01 20:54:17,015 | INFO     | chi2: 1.3851700568077923
[2026-05-01 22:55:00] 2026-05-01 20:54:17,015 | INFO     | current chi2=1.3851700568077923 (change=-0.04627416342710891 %)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,015 | INFO     | right removable region: 195
[2026-05-01 22:55:00] 2026-05-01 20:54:17,015 | INFO     | sum of square deviations: 2334722845.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | sum of deviations: -16551310010.999998
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | mean x (centered): 0.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | mean y: 2366755.0816326533
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | intersect: 2366755.0816326533
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | chi2: 0.05532537617292574
[2026-05-01 22:55:00] 2026-05-01 20:54:17,017 | INFO     | current chi2=0.05532537617292574 (change=96.0040301726221 %)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,018 | INFO     | sum of square deviations: 2160561440.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,019 | INFO     | sum of deviations: -13252361813.000002
[2026-05-01 22:55:00] 2026-05-01 20:54:17,019 | INFO     | mean x (centered): 0.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,019 | INFO     | mean y: 2363847.9895287957
[2026-05-01 22:55:00] 2026-05-01 20:54:17,019 | INFO     | intersect: 2363847.9895287957
[2026-05-01 22:55:00] 2026-05-01 20:54:17,020 | INFO     | chi2: 0.0476976558423333
[2026-05-01 22:55:00] 2026-05-01 20:54:17,020 | INFO     | current chi2=0.0476976558423333 (change=13.787019371998726 %)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,020 | INFO     | left removable region: 10
[2026-05-01 22:55:00] 2026-05-01 20:54:17,020 | INFO     | sum of square deviations: 1963274020.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,021 | INFO     | sum of deviations: -12889614394.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,021 | INFO     | mean x (centered): 0.0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,021 | INFO     | mean y: 2364184.627027027
[2026-05-01 22:55:00] 2026-05-01 20:54:17,022 | INFO     | intersect: 2364184.627027027
[2026-05-01 22:55:00] 2026-05-01 20:54:17,022 | INFO     | chi2: 0.04696308000230643
[2026-05-01 22:55:00] 2026-05-01 20:54:17,022 | INFO     | current memory leak: -6.57 B/s (using 185 data points, chi2=0.05)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | could have reported an average CPU frequency of 2587 MHz (10 samples)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | ..............................
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . Timing measurements:
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . get job = 0 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . initial setup = 5 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . payload setup = 10 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . stage-in = 0 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . payload execution = 12253 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . stage-out = 1 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,023 | INFO     | . log creation = 0 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,024 | INFO     | ..............................
[2026-05-01 22:55:00] 2026-05-01 20:54:17,595 | INFO     | 
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | job summary report
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | --------------------------------------------------
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | PanDA job id: 7122776657
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | task id: 50017065
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | errors: (none)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | pilot state: finished 
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | transexitcode: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,596 | INFO     | exeerrorcode: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | exeerrordiag: 
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | exitcode: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | exitmsg: OK
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | cpuconsumptiontime: 44527 s
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | nevents: 400
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | neventsw: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | pid: 1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | pgrp: 1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | corecount: 4
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | event service: False
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | sizes: {0: 2275218, 1: 2277103, 12: 2277103, 12267: 2306534, 12269: 2315554, 12270: 2315610, 12273: 2315960}
[2026-05-01 22:55:00] 2026-05-01 20:54:17,597 | INFO     | --------------------------------------------------
[2026-05-01 22:55:00] 2026-05-01 20:54:17,598 | INFO     | 
[2026-05-01 22:55:00] 2026-05-01 20:54:17,598 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-05-01 22:55:00] 2026-05-01 20:54:17,630 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,630 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,630 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,630 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 22:55:00] 2026-05-01 20:54:17,632 | INFO     | job 7122776657 has completed (purged errors)
[2026-05-01 22:55:00] 2026-05-01 20:54:17,632 | INFO     | overall cleanup function is called
[2026-05-01 22:55:00] 2026-05-01 20:54:18,639 | INFO     | --- collectZombieJob: --- 10, [1542053]
[2026-05-01 22:55:00] 2026-05-01 20:54:18,640 | INFO     | zombie collector waiting for pid 1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:18,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 22:55:00] 2026-05-01 20:54:18,640 | INFO     | collected zombie processes
[2026-05-01 22:55:00] 2026-05-01 20:54:18,640 | INFO     | will attempt to kill all subprocesses of pid=1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:18,954 | INFO     | process IDs to be killed: [1542053] (in reverse order)
[2026-05-01 22:55:00] 2026-05-01 20:54:19,087 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 22:55:00] 2026-05-01 20:54:19,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 22:55:00] 2026-05-01 20:54:19,100 | INFO     | did not find any defunct processes belonging to 1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:19,112 | INFO     | did not find any defunct processes belonging to 1542053
[2026-05-01 22:55:00] 2026-05-01 20:54:19,113 | INFO     | Ready for new job
[2026-05-01 22:55:00] 2026-05-01 20:54:19,115 | INFO     | ***************************************
[2026-05-01 22:55:00] 2026-05-01 20:54:19,116 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 22:55:00] 2026-05-01 20:54:19,116 | INFO     | ***************************************
[2026-05-01 22:55:00] 2026-05-01 20:54:19,116 | INFO     | 
[2026-05-01 22:55:00] 2026-05-01 20:54:19,120 | INFO     | architecture information:
[2026-05-01 22:55:00] 2026-05-01 20:54:19,121 | INFO     | executing command: cat /etc/os-release
[2026-05-01 22:55:00] 2026-05-01 20:54:19,143 | INFO     | cat /etc/os-release:
[2026-05-01 22:55:00] NAME="CentOS Linux"
[2026-05-01 22:55:00] VERSION="7 (Core)"
[2026-05-01 22:55:00] ID="centos"
[2026-05-01 22:55:00] ID_LIKE="rhel fedora"
[2026-05-01 22:55:00] VERSION_ID="7"
[2026-05-01 22:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 22:55:00] ANSI_COLOR="0;31"
[2026-05-01 22:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 22:55:00] HOME_URL="https://www.centos.org/"
[2026-05-01 22:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 22:55:00] 
[2026-05-01 22:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 22:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 22:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 22:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 22:55:00] 
[2026-05-01 22:55:00] 2026-05-01 20:54:19,143 | INFO     | ***************************************
[2026-05-01 22:55:00] 2026-05-01 20:54:19,646 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-05-01 22:55:00] 2026-05-01 20:54:19,667 | INFO     | sufficient remaining disk space (29096935424 B)
[2026-05-01 22:55:00] 2026-05-01 20:54:19,667 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 22:55:00] 2026-05-01 20:54:19,667 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 22:55:00] 2026-05-01 20:54:19,667 | INFO     | update_server=False
[2026-05-01 22:55:00] 2026-05-01 20:54:19,668 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 22:55:00] 2026-05-01 20:54:19,724 | INFO     | all data control threads have been joined
[2026-05-01 22:55:00] 2026-05-01 20:54:19,733 | INFO     | all payload control threads have been joined
[2026-05-01 22:55:00] 2026-05-01 20:54:19,851 | INFO     | all job control threads have been joined
[2026-05-01 22:55:00] 2026-05-01 20:54:19,964 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 22:55:00] 2026-05-01 20:54:19,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 22:55:00] 2026-05-01 20:54:19,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 22:55:00] 2026-05-01 20:54:19,965 | INFO     | will abort loop
[2026-05-01 22:55:00] 2026-05-01 20:54:20,583 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 22:55:00] 2026-05-01 20:54:20,654 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 22:55:00] 2026-05-01 20:54:20,673 | INFO     | [job] retrieve thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,730 | INFO     | [data] control thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,739 | INFO     | [payload] control thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,857 | INFO     | [job] control thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,879 | INFO     | [data] copytool_in thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:20,970 | INFO     | [job] job monitor thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:21,196 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:21,249 | INFO     | [payload] failed_post thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:21,311 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:21,433 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:21,717 | INFO     | [job] validate thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:22,041 | INFO     | [payload] validate_post thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:22,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 22:55:00] 2026-05-01 20:54:22,659 | INFO     | [data] copytool_out thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:23,158 | INFO     | [job] queue monitor thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:24,589 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 22:55:00] 2026-05-01 20:54:50,013 | INFO     | PID=1536951 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 22:55:00] 2026-05-01 20:54:50,013 | INFO     | .. there are 14 such processes running
[2026-05-01 22:55:00] 2026-05-01 20:54:50,015 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 22:55:00] 2026-05-01 20:54:50,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 22:55:00] 2026-05-01 20:54:50,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 22:55:00] 2026-05-01 20:54:52,507 | INFO     | [monitor] cgroup control has ended
[2026-05-01 22:55:00] 2026-05-01 20:54:54,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22682422171456)>', '<ExcThread(monitor, started 22682110232320)>']
[2026-05-01 22:55:00] 2026-05-01 20:54:55,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 22:55:00] 2026-05-01 20:54:55,040 | INFO     | [monitor] control thread has ended
[2026-05-01 22:55:00] 2026-05-01 20:54:59,317 | INFO     | all workflow threads have been joined
[2026-05-01 22:55:00] 2026-05-01 20:54:59,318 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 22:55:00] 2026-05-01 20:54:59,318 | INFO     | traces error code: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:59,318 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 22:55:00] 2026-05-01 20:54:59,560 [wrapper] ==== pilot stdout END ====
[2026-05-01 22:55:00] 2026-05-01 20:54:59,584 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 22:55:00] 2026-05-01 20:54:59,591 [wrapper] pilotpid: 1536951
[2026-05-01 22:55:00] 2026-05-01 20:54:59,618 [wrapper] Pilot exit status: 0
[2026-05-01 22:55:00] 2026-05-01 20:54:59,686 [wrapper] pandaids: 7122776657
[2026-05-01 22:55:00] 2026-05-01 20:54:59,818 [wrapper] cleanup supervisor_pilot 1800261 1536952
[2026-05-01 22:55:00] 2026-05-01 20:54:59,826 [wrapper] Test setup, not cleaning
[2026-05-01 22:55:00] 2026-05-01 20:54:59,833 [wrapper] apfmon messages muted
[2026-05-01 22:55:00] 2026-05-01 20:54:59,869 [wrapper] ==== wrapper stdout END ====
[2026-05-01 22:55:00] 2026-05-01 20:54:59,903 [wrapper] ==== wrapper stderr END ====
[2026-05-01 22:55:00]  *** Error codes and diagnostics ***
[2026-05-01 22:55:00]     "exeErrorCode": 0,
[2026-05-01 22:55:00]     "pilotErrorCode": 0,
[2026-05-01 22:55:00]  *** Listing of results directory ***
[2026-05-01 22:55:00] total 493924
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc    683926 Apr 30 14:07 pilot3.tar.gz
[2026-05-01 22:55:00] -rwx------. 1 boinc boinc     36322 Apr 30 14:07 runpilot2-wrapper.sh
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc      5631 Apr 30 14:07 queuedata.json
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc       100 May  1 19:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 22:55:00] -rwxr-xr-x. 1 boinc boinc      7986 May  1 19:29 run_atlas
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc       105 May  1 19:29 job.xml
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc 326235763 May  1 19:29 EVNT.50017059._000026.pool.root.1
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc      6483 May  1 19:29 init_data.xml
[2026-05-01 22:55:00] drwxrwx--x. 2 boinc boinc      4096 May  1 19:29 shared
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc    697393 May  1 19:29 input.tar.gz
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc     15667 May  1 19:29 start_atlas.sh
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc         0 May  1 19:29 boinc_lockfile
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc      2508 May  1 19:29 pandaJob.out
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc   1003051 May  1 19:29 agis_schedconf.cvmfs.json
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc       452 May  1 19:29 workernode_map.json
[2026-05-01 22:55:00] drwx------. 5 boinc boinc      4096 May  1 19:29 pilot3
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc 172506576 May  1 22:53 HITS.50017065._000634.pool.root.1
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc       488 May  1 22:53 boinc_task_state.xml
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc      1033 May  1 22:54 memory_monitor_summary.json
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc   1508687 May  1 22:54 agis_ddmendpoints.agis.ALL.json
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc    311305 May  1 22:54 log.50017065._000634.job.log.tgz.1
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc      6422 May  1 22:54 heartbeat_new.json
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc      6313 May  1 22:54 heartbeat.json
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc      8192 May  1 22:54 boinc_mmap_file
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc        28 May  1 22:54 wrapper_checkpoint.txt
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc        95 May  1 22:54 pilot_heartbeat.json
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc      5018 May  1 22:54 pilotlog.txt
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc   1136355 May  1 22:54 log.50017065._000634.job.log.1
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc       357 May  1 22:55 output.list
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc       410 May  1 22:55 runtime_log
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc   1464320 May  1 22:55 result.tar.gz
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc      8828 May  1 22:55 runtime_log.err
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc       665 May  1 22:55 45f90d7a07c4.diag
[2026-05-01 22:55:00] -rw-r--r--. 1 boinc boinc     21050 May  1 22:55 stderr.txt
[2026-05-01 22:55:00] HITS file was successfully produced:
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc 172506576 May  1 22:53 shared/HITS.pool.root.1
[2026-05-01 22:55:00]  *** Contents of shared directory: ***
[2026-05-01 22:55:00] total 489196
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc 326235763 May  1 19:29 ATLAS.root_0
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc    697393 May  1 19:29 input.tar.gz
[2026-05-01 22:55:00] -rw-r--r--. 2 boinc boinc     15667 May  1 19:29 start_atlas.sh
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc 172506576 May  1 22:53 HITS.pool.root.1
[2026-05-01 22:55:00] -rw-------. 1 boinc boinc   1464320 May  1 22:55 result.tar.gz
22:55:01 (1532851): run_atlas exited; CPU time 44960.695434
22:55:01 (1532851): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN