Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:10 (1871290): wrapper (7.7.26015): starting
22:43:10 (1871290): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 22:43:10] Arguments: --nthreads 4
[2026-05-03 22:43:10] Threads: 4
[2026-05-03 22:43:10] Checking for CVMFS
[2026-05-03 22:43:10] No cvmfs_config command found, will try listing directly
[2026-05-03 22:43:10] CVMFS is ok
[2026-05-03 22:43:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 22:43:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 22:43:10] Further information can be found at the LHC@home message board.
[2026-05-03 22:43:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 22:43:10] Checking for apptainer binary...
[2026-05-03 22:43:10] which: no apptainer in ((null))
[2026-05-03 22:43:10] apptainer is not installed, using version from CVMFS
[2026-05-03 22:43:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 22:43:11] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-05-03 22:43:11] apptainer works
[2026-05-03 22:43:11] Set ATHENA_PROC_NUMBER=4
[2026-05-03 22:43:11] Set ATHENA_CORE_NUMBER=4
[2026-05-03 22:43:11] Starting ATLAS job with PandaID=7122342459
[2026-05-03 22:43:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 03:00:52]  *** The last 200 lines of the pilot log: ***
[2026-05-04 03:00:52] 2026-05-04 01:00:10,472 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/4/workernode_map.json
[2026-05-04 03:00:52] 2026-05-04 01:00:10,472 | INFO     | this job has now completed (state=finished)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,472 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,472 | INFO     | log transfer has been attempted: DONE
[2026-05-04 03:00:52] 2026-05-04 01:00:10,472 | INFO     | job 7122342459 has finished - writing final server update
[2026-05-04 03:00:52] 2026-05-04 01:00:10,473 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3733437/.job.ad'
[2026-05-04 03:00:52] 2026-05-04 01:00:10,473 | INFO     | total number of processed events: 400 (read)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,502 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/PanDA_Pilot-7122342459/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,503 | INFO     | extracted standard info from prmon json
[2026-05-04 03:00:52] 2026-05-04 01:00:10,503 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 03:00:52] 2026-05-04 01:00:10,503 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 03:00:52] 2026-05-04 01:00:10,503 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 03:00:52] 2026-05-04 01:00:10,512 | INFO     | fitting pss+swap vs Time
[2026-05-04 03:00:52] 2026-05-04 01:00:10,513 | INFO     | sum of square deviations: 4903347750.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,515 | INFO     | sum of deviations: 31484867143.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,515 | INFO     | mean x (centered): 0.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,515 | INFO     | mean y: 2323422.25498008
[2026-05-04 03:00:52] 2026-05-04 01:00:10,515 | INFO     | intersect: 2323422.25498008
[2026-05-04 03:00:52] 2026-05-04 01:00:10,516 | INFO     | chi2: 1.4994226907665213
[2026-05-04 03:00:52] 2026-05-04 01:00:10,516 | INFO     | sum of square deviations: 4616114457.5
[2026-05-04 03:00:52] 2026-05-04 01:00:10,518 | INFO     | sum of deviations: 30639784000.999996
[2026-05-04 03:00:52] 2026-05-04 01:00:10,518 | INFO     | mean x (centered): 0.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,518 | INFO     | mean y: 2322974.276422764
[2026-05-04 03:00:52] 2026-05-04 01:00:10,518 | INFO     | intersect: 2322974.276422764
[2026-05-04 03:00:52] 2026-05-04 01:00:10,519 | INFO     | chi2: 1.50007171818568
[2026-05-04 03:00:52] 2026-05-04 01:00:10,519 | INFO     | current chi2=1.50007171818568 (change=-0.04328515388991686 %)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,519 | INFO     | right removable region: 245
[2026-05-04 03:00:52] 2026-05-04 01:00:10,519 | INFO     | sum of square deviations: 4616114457.5
[2026-05-04 03:00:52] 2026-05-04 01:00:10,521 | INFO     | sum of deviations: -4617034642.5
[2026-05-04 03:00:52] 2026-05-04 01:00:10,521 | INFO     | mean x (centered): 0.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,521 | INFO     | mean y: 2342411.264227642
[2026-05-04 03:00:52] 2026-05-04 01:00:10,521 | INFO     | intersect: 2342411.264227642
[2026-05-04 03:00:52] 2026-05-04 01:00:10,522 | INFO     | chi2: 0.010749871402855087
[2026-05-04 03:00:52] 2026-05-04 01:00:10,522 | INFO     | current chi2=0.010749871402855087 (change=99.28306597805589 %)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,522 | INFO     | sum of square deviations: 4340323240.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,524 | INFO     | sum of deviations: -3628915742.000001
[2026-05-04 03:00:52] 2026-05-04 01:00:10,524 | INFO     | mean x (centered): 0.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,524 | INFO     | mean y: 2341862.3029045644
[2026-05-04 03:00:52] 2026-05-04 01:00:10,524 | INFO     | intersect: 2341862.3029045644
[2026-05-04 03:00:52] 2026-05-04 01:00:10,525 | INFO     | chi2: 0.010299244488917616
[2026-05-04 03:00:52] 2026-05-04 01:00:10,525 | INFO     | current chi2=0.010299244488917616 (change=4.191928415234702 %)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,525 | INFO     | left removable region: 10
[2026-05-04 03:00:52] 2026-05-04 01:00:10,525 | INFO     | sum of square deviations: 4024149870.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,527 | INFO     | sum of deviations: -3773048555.000001
[2026-05-04 03:00:52] 2026-05-04 01:00:10,527 | INFO     | mean x (centered): 0.0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,527 | INFO     | mean y: 2341779.885106383
[2026-05-04 03:00:52] 2026-05-04 01:00:10,527 | INFO     | intersect: 2341779.885106383
[2026-05-04 03:00:52] 2026-05-04 01:00:10,528 | INFO     | chi2: 0.010171987558540405
[2026-05-04 03:00:52] 2026-05-04 01:00:10,528 | INFO     | current memory leak: -0.94 B/s (using 235 data points, chi2=0.01)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,528 | INFO     | could have reported an average CPU frequency of 2682 MHz (12 samples)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | ..............................
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . Timing measurements:
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . get job = 0 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . initial setup = 25 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . payload setup = 38 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . stage-in = 0 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . payload execution = 15304 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . stage-out = 1 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | . log creation = 0 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,529 | INFO     | ..............................
[2026-05-04 03:00:52] 2026-05-04 01:00:10,645 | INFO     | 
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | job summary report
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | --------------------------------------------------
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | PanDA job id: 7122342459
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | task id: 50017022
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | errors: (none)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | pilot state: finished 
[2026-05-04 03:00:52] 2026-05-04 01:00:10,646 | INFO     | transexitcode: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | exeerrorcode: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | exeerrordiag: 
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | exitcode: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | exitmsg: OK
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | cpuconsumptiontime: 54812 s
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | nevents: 400
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | neventsw: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | pid: 1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | pgrp: 1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | corecount: 4
[2026-05-04 03:00:52] 2026-05-04 01:00:10,647 | INFO     | event service: False
[2026-05-04 03:00:52] 2026-05-04 01:00:10,648 | INFO     | sizes: {0: 2275296, 1: 2277125, 15345: 2308850, 15347: 2317870, 15348: 2317926, 15349: 2318120}
[2026-05-04 03:00:52] 2026-05-04 01:00:10,648 | INFO     | --------------------------------------------------
[2026-05-04 03:00:52] 2026-05-04 01:00:10,648 | INFO     | 
[2026-05-04 03:00:52] 2026-05-04 01:00:10,648 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/4
[2026-05-04 03:00:52] 2026-05-04 01:00:10,688 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,689 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,690 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 03:00:52] 2026-05-04 01:00:10,691 | INFO     | job 7122342459 has completed (purged errors)
[2026-05-04 03:00:52] 2026-05-04 01:00:10,691 | INFO     | overall cleanup function is called
[2026-05-04 03:00:52] 2026-05-04 01:00:11,699 | INFO     | --- collectZombieJob: --- 10, [1881569]
[2026-05-04 03:00:52] 2026-05-04 01:00:11,700 | INFO     | zombie collector waiting for pid 1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:11,700 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 03:00:52] 2026-05-04 01:00:11,700 | INFO     | collected zombie processes
[2026-05-04 03:00:52] 2026-05-04 01:00:11,700 | INFO     | will attempt to kill all subprocesses of pid=1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:12,511 | WARNING  | process 1881569 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 03:00:52] 2026-05-04 01:00:13,456 | INFO     | process IDs to be killed: [1881569] (in reverse order)
[2026-05-04 03:00:52] 2026-05-04 01:00:13,585 | INFO     | using path: /var/lib/boinc/var/slot48/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 03:00:52] 2026-05-04 01:00:13,894 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 03:00:52] 2026-05-04 01:00:13,895 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 03:00:52] 2026-05-04 01:00:13,981 | INFO     | did not find any defunct processes belonging to 1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:14,078 | INFO     | did not find any defunct processes belonging to 1881569
[2026-05-04 03:00:52] 2026-05-04 01:00:14,079 | INFO     | Ready for new job
[2026-05-04 03:00:52] 2026-05-04 01:00:14,082 | INFO     | ***************************************
[2026-05-04 03:00:52] 2026-05-04 01:00:14,082 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 03:00:52] 2026-05-04 01:00:14,082 | INFO     | ***************************************
[2026-05-04 03:00:52] 2026-05-04 01:00:14,082 | INFO     | 
[2026-05-04 03:00:52] 2026-05-04 01:00:14,097 | INFO     | architecture information:
[2026-05-04 03:00:52] 2026-05-04 01:00:14,101 | INFO     | executing command: cat /etc/os-release
[2026-05-04 03:00:52] 2026-05-04 01:00:14,135 | INFO     | cat /etc/os-release:
[2026-05-04 03:00:52] NAME="CentOS Linux"
[2026-05-04 03:00:52] VERSION="7 (Core)"
[2026-05-04 03:00:52] ID="centos"
[2026-05-04 03:00:52] ID_LIKE="rhel fedora"
[2026-05-04 03:00:52] VERSION_ID="7"
[2026-05-04 03:00:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 03:00:52] ANSI_COLOR="0;31"
[2026-05-04 03:00:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 03:00:52] HOME_URL="https://www.centos.org/"
[2026-05-04 03:00:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 03:00:52] 
[2026-05-04 03:00:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 03:00:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 03:00:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 03:00:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 03:00:52] 
[2026-05-04 03:00:52] 2026-05-04 01:00:14,135 | INFO     | ***************************************
[2026-05-04 03:00:52] 2026-05-04 01:00:14,524 | INFO     | number of running child processes to parent process 1881569: 1
[2026-05-04 03:00:52] 2026-05-04 01:00:14,525 | INFO     | maximum number of monitored processes: 6
[2026-05-04 03:00:52] 2026-05-04 01:00:14,525 | INFO     | aborting job monitoring since job object (job id=7122342459) has expired
[2026-05-04 03:00:52] 2026-05-04 01:00:14,638 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/4
[2026-05-04 03:00:52] 2026-05-04 01:00:14,667 | INFO     | sufficient remaining disk space (241432526848 B)
[2026-05-04 03:00:52] 2026-05-04 01:00:14,668 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 03:00:52] 2026-05-04 01:00:14,668 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 03:00:52] 2026-05-04 01:00:14,668 | INFO     | update_server=False
[2026-05-04 03:00:52] 2026-05-04 01:00:14,668 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 03:00:52] 2026-05-04 01:00:14,668 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 03:00:52] 2026-05-04 01:00:14,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 03:00:52] 2026-05-04 01:00:14,669 | INFO     | will abort loop
[2026-05-04 03:00:52] 2026-05-04 01:00:14,899 | INFO     | all payload control threads have been joined
[2026-05-04 03:00:52] 2026-05-04 01:00:15,100 | INFO     | all job control threads have been joined
[2026-05-04 03:00:52] 2026-05-04 01:00:15,588 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 03:00:52] 2026-05-04 01:00:15,602 | INFO     | all data control threads have been joined
[2026-05-04 03:00:52] 2026-05-04 01:00:15,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 03:00:52] 2026-05-04 01:00:15,674 | INFO     | [job] retrieve thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:15,674 | INFO     | [job] job monitor thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:15,808 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:15,904 | INFO     | [payload] control thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,105 | INFO     | [job] control thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,271 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,393 | INFO     | [payload] validate_post thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,569 | INFO     | [payload] failed_post thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,607 | INFO     | [data] control thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,662 | INFO     | [job] queue monitor thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,674 | INFO     | [data] copytool_out thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,699 | INFO     | [data] copytool_in thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,742 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:16,990 | INFO     | [job] validate thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:19,594 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:25,297 | INFO     | job.realtimelogging is not enabled
[2026-05-04 03:00:52] 2026-05-04 01:00:26,302 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 03:00:52] 2026-05-04 01:00:43,589 | INFO     | PID=1875654 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-05-04 03:00:52] 2026-05-04 01:00:43,590 | INFO     | .. there are 26 such processes running
[2026-05-04 03:00:52] 2026-05-04 01:00:43,598 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 03:00:52] 2026-05-04 01:00:43,599 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 03:00:52] 2026-05-04 01:00:43,599 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 03:00:52] 2026-05-04 01:00:44,912 | INFO     | [monitor] cgroup control has ended
[2026-05-04 03:00:52] 2026-05-04 01:00:46,730 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22907755566912)>', '<ExcThread(monitor, started 22907450570496)>']
[2026-05-04 03:00:52] 2026-05-04 01:00:47,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 03:00:52] 2026-05-04 01:00:47,619 | INFO     | [monitor] control thread has ended
[2026-05-04 03:00:52] 2026-05-04 01:00:51,755 | INFO     | all workflow threads have been joined
[2026-05-04 03:00:52] 2026-05-04 01:00:51,756 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 03:00:52] 2026-05-04 01:00:51,756 | INFO     | traces error code: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:51,756 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 03:00:52] 2026-05-04 01:00:51,904 [wrapper] ==== pilot stdout END ====
[2026-05-04 03:00:52] 2026-05-04 01:00:51,908 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 03:00:52] 2026-05-04 01:00:51,914 [wrapper] pilotpid: 1875654
[2026-05-04 03:00:52] 2026-05-04 01:00:51,917 [wrapper] Pilot exit status: 0
[2026-05-04 03:00:52] 2026-05-04 01:00:51,982 [wrapper] pandaids: 7122342459
[2026-05-04 03:00:52] 2026-05-04 01:00:52,189 [wrapper] cleanup supervisor_pilot 2456068 1875655
[2026-05-04 03:00:52] 2026-05-04 01:00:52,201 [wrapper] Test setup, not cleaning
[2026-05-04 03:00:52] 2026-05-04 01:00:52,209 [wrapper] apfmon messages muted
[2026-05-04 03:00:52] 2026-05-04 01:00:52,229 [wrapper] ==== wrapper stdout END ====
[2026-05-04 03:00:52] 2026-05-04 01:00:52,234 [wrapper] ==== wrapper stderr END ====
[2026-05-04 03:00:52]  *** Error codes and diagnostics ***
[2026-05-04 03:00:52]     "exeErrorCode": 0,
[2026-05-04 03:00:52]     "pilotErrorCode": 0,
[2026-05-04 03:00:52]  *** Listing of results directory ***
[2026-05-04 03:00:52] total 484128
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc    683926 Apr 30 12:14 pilot3.tar.gz
[2026-05-04 03:00:52] -rwx------. 1 boinc boinc     36322 Apr 30 12:17 runpilot2-wrapper.sh
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc      5631 Apr 30 12:18 queuedata.json
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc       100 May  3 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 03:00:52] -rwxr-xr-x. 1 boinc boinc      7986 May  3 22:43 run_atlas
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc       105 May  3 22:43 job.xml
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc      6540 May  3 22:43 init_data.xml
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc 312940341 May  3 22:43 EVNT.50017015._000009.pool.root.1
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc     15667 May  3 22:43 start_atlas.sh
[2026-05-04 03:00:52] drwxrwx--x. 2 boinc boinc      4096 May  3 22:43 shared
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc    697395 May  3 22:43 input.tar.gz
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc         0 May  3 22:43 boinc_lockfile
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc      2527 May  3 22:43 pandaJob.out
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc   1003003 May  3 22:43 agis_schedconf.cvmfs.json
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc       443 May  3 22:44 workernode_map.json
[2026-05-04 03:00:52] drwx------. 5 boinc boinc      4096 May  3 22:44 pilot3
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc 175246868 May  4 02:59 HITS.50017022._000207.pool.root.1
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc       489 May  4 03:00 boinc_task_state.xml
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc      1038 May  4 03:00 memory_monitor_summary.json
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc   1508687 May  4 03:00 agis_ddmendpoints.agis.ALL.json
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc    339513 May  4 03:00 log.50017022._000207.job.log.tgz.1
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc      6367 May  4 03:00 heartbeat_new.json
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc      6258 May  4 03:00 heartbeat.json
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc      8192 May  4 03:00 boinc_mmap_file
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc        28 May  4 03:00 wrapper_checkpoint.txt
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc        95 May  4 03:00 pilot_heartbeat.json
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc      5196 May  4 03:00 pilotlog.txt
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc   1371253 May  4 03:00 log.50017022._000207.job.log.1
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc       357 May  4 03:00 output.list
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc       410 May  4 03:00 runtime_log
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc   1730560 May  4 03:00 result.tar.gz
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc      8828 May  4 03:00 runtime_log.err
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc       666 May  4 03:00 2c549b7b00c5.diag
[2026-05-04 03:00:52] -rw-r--r--. 1 boinc boinc     21055 May  4 03:00 stderr.txt
[2026-05-04 03:00:52] HITS file was successfully produced:
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc 175246868 May  4 02:59 shared/HITS.pool.root.1
[2026-05-04 03:00:52]  *** Contents of shared directory: ***
[2026-05-04 03:00:52] total 479148
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc 312940341 May  3 22:43 ATLAS.root_0
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc     15667 May  3 22:43 start_atlas.sh
[2026-05-04 03:00:52] -rw-r--r--. 2 boinc boinc    697395 May  3 22:43 input.tar.gz
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc 175246868 May  4 02:59 HITS.pool.root.1
[2026-05-04 03:00:52] -rw-------. 1 boinc boinc   1730560 May  4 03:00 result.tar.gz
03:00:54 (1871290): run_atlas exited; CPU time 55684.794699
03:00:54 (1871290): called boinc_finish(0)

</stderr_txt>
]]>

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