Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:53:14 (19500): wrapper (7.7.26015): starting
03:53:14 (19500): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 03:53:14] Arguments: --nthreads 8
[2026-05-01 03:53:14] Threads: 8
[2026-05-01 03:53:14] Checking for CVMFS
[2026-05-01 03:53:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 03:53:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 03:53:18] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 03:53:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 03:53:19] 2.11.2.0 14708 22144 102060 159072 2 53 22162432 25165825 96 130560 0 9414658 99.829 8323947 3550 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 03:53:19] CVMFS is ok
[2026-05-01 03:53:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 03:53:19] Checking for apptainer binary...
[2026-05-01 03:53:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 03:53:19] Running /usr/bin/apptainer --version
[2026-05-01 03:53:19] apptainer version 1.3.2-1.el7
[2026-05-01 03:53:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 03:53:44] cg-vwn445.simple-grid.lan
[2026-05-01 03:53:44] apptainer works
[2026-05-01 03:53:44] Set ATHENA_PROC_NUMBER=8
[2026-05-01 03:53:44] Set ATHENA_CORE_NUMBER=8
[2026-05-01 03:53:44] Starting ATLAS job with PandaID=7122780133
[2026-05-01 03:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 10:42:06]  *** The last 200 lines of the pilot log: ***
[2026-05-01 10:42:06] 2026-05-01 08:41:24,374 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 10:42:06] 2026-05-01 08:41:24,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 10:42:06] 2026-05-01 08:41:24,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 10:42:06] 2026-05-01 08:41:24,383 | INFO     | fitting pss+swap vs Time
[2026-05-01 10:42:06] 2026-05-01 08:41:24,383 | INFO     | sum of square deviations: 18252584090.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,388 | INFO     | sum of deviations: 253941309812.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,389 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,389 | INFO     | mean y: 2458982.0976863755
[2026-05-01 10:42:06] 2026-05-01 08:41:24,389 | INFO     | intersect: 2458982.0976863755
[2026-05-01 10:42:06] 2026-05-01 08:41:24,389 | INFO     | chi2: 10.493666818150231
[2026-05-01 10:42:06] 2026-05-01 08:41:24,390 | INFO     | sum of square deviations: 17557761760.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,395 | INFO     | sum of deviations: 277667433296.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,395 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,395 | INFO     | mean y: 2464127.53125
[2026-05-01 10:42:06] 2026-05-01 08:41:24,396 | INFO     | intersect: 2464127.53125
[2026-05-01 10:42:06] 2026-05-01 08:41:24,396 | INFO     | chi2: 9.718198153806913
[2026-05-01 10:42:06] 2026-05-01 08:41:24,396 | INFO     | current chi2=9.718198153806913 (change=7.389873128066532 %)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,396 | INFO     | right removable region: 383
[2026-05-01 10:42:06] 2026-05-01 08:41:24,397 | INFO     | sum of square deviations: 17557761760.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,402 | INFO     | sum of deviations: 112173329592.5
[2026-05-01 10:42:06] 2026-05-01 08:41:24,402 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,402 | INFO     | mean y: 2490091.2526041665
[2026-05-01 10:42:06] 2026-05-01 08:41:24,402 | INFO     | intersect: 2490091.2526041665
[2026-05-01 10:42:06] 2026-05-01 08:41:24,403 | INFO     | chi2: 5.188438743778579
[2026-05-01 10:42:06] 2026-05-01 08:41:24,403 | INFO     | current chi2=5.188438743778579 (change=50.55647531323879 %)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,404 | INFO     | sum of square deviations: 16880800230.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,408 | INFO     | sum of deviations: -2906602419.9999924
[2026-05-01 10:42:06] 2026-05-01 08:41:24,409 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,409 | INFO     | mean y: 2516003.2928759893
[2026-05-01 10:42:06] 2026-05-01 08:41:24,409 | INFO     | intersect: 2516003.2928759893
[2026-05-01 10:42:06] 2026-05-01 08:41:24,410 | INFO     | chi2: 1.899926668252457
[2026-05-01 10:42:06] 2026-05-01 08:41:24,410 | INFO     | current chi2=1.899926668252457 (change=63.3815341747911 %)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,410 | INFO     | sum of square deviations: 16221466937.5
[2026-05-01 10:42:06] 2026-05-01 08:41:24,415 | INFO     | sum of deviations: -55653488470.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,415 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,415 | INFO     | mean y: 2528149.0695187165
[2026-05-01 10:42:06] 2026-05-01 08:41:24,416 | INFO     | intersect: 2528149.0695187165
[2026-05-01 10:42:06] 2026-05-01 08:41:24,416 | INFO     | chi2: 0.9736609380941734
[2026-05-01 10:42:06] 2026-05-01 08:41:24,416 | INFO     | current chi2=0.9736609380941734 (change=48.752709545903585 %)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,417 | INFO     | sum of square deviations: 15579529320.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,421 | INFO     | sum of deviations: -63391514943.000015
[2026-05-01 10:42:06] 2026-05-01 08:41:24,421 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,422 | INFO     | mean y: 2529974.0894308942
[2026-05-01 10:42:06] 2026-05-01 08:41:24,422 | INFO     | intersect: 2529974.0894308942
[2026-05-01 10:42:06] 2026-05-01 08:41:24,422 | INFO     | chi2: 0.9354928123696772
[2026-05-01 10:42:06] 2026-05-01 08:41:24,422 | INFO     | current chi2=0.9354928123696772 (change=3.9200633640706433 %)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,423 | INFO     | left removable region: 20
[2026-05-01 10:42:06] 2026-05-01 08:41:24,423 | INFO     | sum of square deviations: 14831839022.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,427 | INFO     | sum of deviations: -36783299022.000015
[2026-05-01 10:42:06] 2026-05-01 08:41:24,428 | INFO     | mean x (centered): 0.0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,428 | INFO     | mean y: 2536400.347107438
[2026-05-01 10:42:06] 2026-05-01 08:41:24,428 | INFO     | intersect: 2536400.347107438
[2026-05-01 10:42:06] 2026-05-01 08:41:24,428 | INFO     | chi2: 0.07943177200226204
[2026-05-01 10:42:06] 2026-05-01 08:41:24,429 | INFO     | current memory leak: -2.48 B/s (using 363 data points, chi2=0.08)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,429 | INFO     | could have reported an average CPU frequency of 1999 MHz (17 samples)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | ..............................
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . Timing measurements:
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . get job = 0 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . initial setup = 117 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . payload setup = 216 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . stage-in = 0 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . payload execution = 23830 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,430 | INFO     | . stage-out = 5 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,431 | INFO     | . log creation = 1 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,431 | INFO     | ..............................
[2026-05-01 10:42:06] 2026-05-01 08:41:24,562 | INFO     | 
[2026-05-01 10:42:06] 2026-05-01 08:41:24,562 | INFO     | job summary report
[2026-05-01 10:42:06] 2026-05-01 08:41:24,562 | INFO     | --------------------------------------------------
[2026-05-01 10:42:06] 2026-05-01 08:41:24,562 | INFO     | PanDA job id: 7122780133
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | task id: 50017241
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | errors: (none)
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | pilot state: finished 
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | transexitcode: 0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | exeerrorcode: 0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | exeerrordiag: 
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | exitcode: 0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | exitmsg: OK
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | cpuconsumptiontime: 91209 s
[2026-05-01 10:42:06] 2026-05-01 08:41:24,563 | INFO     | nevents: 400
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | neventsw: 0
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | pid: 27972
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | pgrp: 27972
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | corecount: 8
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | event service: False
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | sizes: {0: 2276548, 1: 2276949, 2: 2278405, 13: 2278405, 24050: 2313469, 24055: 2322653, 24056: 2322855}
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | --------------------------------------------------
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | 
[2026-05-01 10:42:06] 2026-05-01 08:41:24,564 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2026-05-01 10:42:06] 2026-05-01 08:41:25,057 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,059 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 10:42:06] 2026-05-01 08:41:25,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,060 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 10:42:06] 2026-05-01 08:41:25,060 | INFO     | job 7122780133 has completed (purged errors)
[2026-05-01 10:42:06] 2026-05-01 08:41:25,060 | INFO     | overall cleanup function is called
[2026-05-01 10:42:06] 2026-05-01 08:41:26,069 | INFO     | --- collectZombieJob: --- 10, [27972]
[2026-05-01 10:42:06] 2026-05-01 08:41:26,069 | INFO     | zombie collector waiting for pid 27972
[2026-05-01 10:42:06] 2026-05-01 08:41:26,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 10:42:06] 2026-05-01 08:41:26,070 | INFO     | collected zombie processes
[2026-05-01 10:42:06] 2026-05-01 08:41:26,070 | INFO     | will attempt to kill all subprocesses of pid=27972
[2026-05-01 10:42:06] 2026-05-01 08:41:26,135 | INFO     | process IDs to be killed: [27972] (in reverse order)
[2026-05-01 10:42:06] 2026-05-01 08:41:26,871 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 10:42:06] 2026-05-01 08:41:26,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 10:42:06] 2026-05-01 08:41:26,874 | INFO     | did not find any defunct processes belonging to 27972
[2026-05-01 10:42:06] 2026-05-01 08:41:26,876 | INFO     | did not find any defunct processes belonging to 27972
[2026-05-01 10:42:06] 2026-05-01 08:41:26,876 | INFO     | Ready for new job
[2026-05-01 10:42:06] 2026-05-01 08:41:26,878 | INFO     | ***************************************
[2026-05-01 10:42:06] 2026-05-01 08:41:26,879 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 10:42:06] 2026-05-01 08:41:26,879 | INFO     | ***************************************
[2026-05-01 10:42:06] 2026-05-01 08:41:26,879 | INFO     | 
[2026-05-01 10:42:06] 2026-05-01 08:41:26,879 | INFO     | pilot is running in a VM
[2026-05-01 10:42:06] 2026-05-01 08:41:26,880 | INFO     | architecture information:
[2026-05-01 10:42:06] 2026-05-01 08:41:26,885 | INFO     | executing command: cat /etc/os-release
[2026-05-01 10:42:06] 2026-05-01 08:41:27,194 | INFO     | cat /etc/os-release:
[2026-05-01 10:42:06] NAME="CentOS Linux"
[2026-05-01 10:42:06] VERSION="7 (Core)"
[2026-05-01 10:42:06] ID="centos"
[2026-05-01 10:42:06] ID_LIKE="rhel fedora"
[2026-05-01 10:42:06] VERSION_ID="7"
[2026-05-01 10:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 10:42:06] ANSI_COLOR="0;31"
[2026-05-01 10:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 10:42:06] HOME_URL="https://www.centos.org/"
[2026-05-01 10:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 10:42:06] 
[2026-05-01 10:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 10:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 10:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 10:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 10:42:06] 
[2026-05-01 10:42:06] 2026-05-01 08:41:27,195 | INFO     | ***************************************
[2026-05-01 10:42:06] 2026-05-01 08:41:27,698 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2026-05-01 10:42:06] 2026-05-01 08:41:27,926 | INFO     | sufficient remaining disk space (495461597184 B)
[2026-05-01 10:42:06] 2026-05-01 08:41:27,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 10:42:06] 2026-05-01 08:41:27,926 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 10:42:06] 2026-05-01 08:41:27,926 | INFO     | update_server=False
[2026-05-01 10:42:06] 2026-05-01 08:41:27,926 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 10:42:06] 2026-05-01 08:41:27,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 10:42:06] 2026-05-01 08:41:27,927 | INFO     | aborting loop
[2026-05-01 10:42:06] 2026-05-01 08:41:28,509 | INFO     | all payload control threads have been joined
[2026-05-01 10:42:06] 2026-05-01 08:41:28,854 | INFO     | all data control threads have been joined
[2026-05-01 10:42:06] 2026-05-01 08:41:28,932 | INFO     | [job] retrieve thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:28,933 | INFO     | [job] job monitor thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:28,979 | INFO     | [data] copytool_in thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,049 | INFO     | [payload] validate_post thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,146 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 10:42:06] 2026-05-01 08:41:29,227 | INFO     | [job] validate thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,284 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,515 | INFO     | [payload] control thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,524 | INFO     | all job control threads have been joined
[2026-05-01 10:42:06] 2026-05-01 08:41:29,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 10:42:06] 2026-05-01 08:41:29,800 | INFO     | [payload] failed_post thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,802 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,860 | INFO     | [data] control thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:29,879 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 10:42:06] 2026-05-01 08:41:30,229 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:30,530 | INFO     | [job] control thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:30,583 | INFO     | [job] queue monitor thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:31,220 | INFO     | [data] copytool_out thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:33,888 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 10:42:06] 2026-05-01 08:41:56,074 | INFO     | [monitor] cgroup control has ended
[2026-05-01 10:42:06] 2026-05-01 08:41:57,154 | INFO     | PID=23505 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 10:42:06] 2026-05-01 08:41:57,154 | INFO     | .. there are 2 such processes running
[2026-05-01 10:42:06] 2026-05-01 08:41:57,161 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 10:42:06] 2026-05-01 08:41:57,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 10:42:06] 2026-05-01 08:41:57,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 10:42:06] 2026-05-01 08:41:57,837 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140349888026432)>', '<ExcThread(monitor, started 140349280327424)>']
[2026-05-01 10:42:06] 2026-05-01 08:41:58,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 10:42:06] 2026-05-01 08:41:58,167 | INFO     | [monitor] control thread has ended
[2026-05-01 10:42:06] 2026-05-01 08:42:02,863 | INFO     | all workflow threads have been joined
[2026-05-01 10:42:06] 2026-05-01 08:42:02,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 10:42:06] 2026-05-01 08:42:02,864 | INFO     | traces error code: 0
[2026-05-01 10:42:06] 2026-05-01 08:42:02,864 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 10:42:06] 2026-05-01 08:42:03,283 [wrapper] ==== pilot stdout END ====
[2026-05-01 10:42:06] 2026-05-01 08:42:03,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 10:42:06] 2026-05-01 08:42:03,477 [wrapper] pilotpid: 23505
[2026-05-01 10:42:06] 2026-05-01 08:42:03,588 [wrapper] Pilot exit status: 0
[2026-05-01 10:42:06] 2026-05-01 08:42:04,063 [wrapper] pandaids: 7122780133
[2026-05-01 10:42:06] 2026-05-01 08:42:05,016 [wrapper] cleanup supervisor_pilot  4106 23506
[2026-05-01 10:42:06] 2026-05-01 08:42:05,119 [wrapper] Test setup, not cleaning
[2026-05-01 10:42:06] 2026-05-01 08:42:05,224 [wrapper] apfmon messages muted
[2026-05-01 10:42:06] 2026-05-01 08:42:05,288 [wrapper] ==== wrapper stdout END ====
[2026-05-01 10:42:06] 2026-05-01 08:42:05,373 [wrapper] ==== wrapper stderr END ====
[2026-05-01 10:42:06]  *** Error codes and diagnostics ***
[2026-05-01 10:42:06]     "exeErrorCode": 0,
[2026-05-01 10:42:06]     "pilotErrorCode": 0,
[2026-05-01 10:42:06]  *** Listing of results directory ***
[2026-05-01 10:42:06] total 490288
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc    683926 Apr 30 15:39 pilot3.tar.gz
[2026-05-01 10:42:06] -rwx------. 1 boinc boinc     36322 Apr 30 15:43 runpilot2-wrapper.sh
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc      5631 Apr 30 15:43 queuedata.json
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc       100 May  1 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 10:42:06] -rwxr-xr-x. 1 boinc boinc      7986 May  1 03:53 run_atlas
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc       105 May  1 03:53 job.xml
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc      6308 May  1 03:53 init_data.xml
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc 311200451 May  1 03:53 EVNT.50017236._000014.pool.root.1
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc     15667 May  1 03:53 start_atlas.sh
[2026-05-01 10:42:06] drwxrwx--x. 2 boinc boinc        68 May  1 03:53 shared
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc    697411 May  1 03:53 input.tar.gz
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc         0 May  1 03:53 boinc_lockfile
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc      2563 May  1 03:53 pandaJob.out
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc       415 May  1 04:00 workernode_map.json
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc   1001806 May  1 04:00 agis_schedconf.cvmfs.json
[2026-05-01 10:42:06] drwx------. 5 boinc boinc      4096 May  1 04:00 pilot3
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc 181322125 May  1 10:39 HITS.50017241._000341.pool.root.1
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc       488 May  1 10:40 boinc_task_state.xml
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc      1010 May  1 10:41 memory_monitor_summary.json
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc   1510091 May  1 10:41 agis_ddmendpoints.agis.ALL.json
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc    489116 May  1 10:41 log.50017241._000341.job.log.tgz.1
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc      6329 May  1 10:41 heartbeat_new.json
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc      6220 May  1 10:41 heartbeat.json
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc      8192 May  1 10:41 boinc_mmap_file
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc        28 May  1 10:41 wrapper_checkpoint.txt
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc        95 May  1 10:41 pilot_heartbeat.json
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc      4884 May  1 10:42 pilotlog.txt
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc   2213620 May  1 10:42 log.50017241._000341.job.log.1
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc       357 May  1 10:42 output.list
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc       410 May  1 10:42 runtime_log
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc   2723840 May  1 10:42 result.tar.gz
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc      8455 May  1 10:42 runtime_log.err
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc       656 May  1 10:42 5c6f8c35f60d.diag
[2026-05-01 10:42:06] -rw-r--r--. 1 boinc boinc     20460 May  1 10:42 stderr.txt
[2026-05-01 10:42:06] HITS file was successfully produced:
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc 181322125 May  1 10:39 shared/HITS.pool.root.1
[2026-05-01 10:42:06]  *** Contents of shared directory: ***
[2026-05-01 10:42:06] total 484344
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc 311200451 May  1 03:53 ATLAS.root_0
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc     15667 May  1 03:53 start_atlas.sh
[2026-05-01 10:42:06] -rw-r--r--. 2 boinc boinc    697411 May  1 03:53 input.tar.gz
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc 181322125 May  1 10:39 HITS.pool.root.1
[2026-05-01 10:42:06] -rw-------. 1 boinc boinc   2723840 May  1 10:42 result.tar.gz
10:42:08 (19500): run_atlas exited; CPU time 91451.042395
10:42:08 (19500): called boinc_finish(0)

</stderr_txt>
]]>

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