Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:29 (12000): wrapper (7.7.26015): starting
01:04:29 (12000): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 01:04:29] Arguments: --nthreads 8
[2026-05-01 01:04:29] Threads: 8
[2026-05-01 01:04:29] Checking for CVMFS
[2026-05-01 01:04:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 01:04:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 01:04:32] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 01:04:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 01:04:34] 2.11.2.0 2379 21957 98864 159069 3 119 19404133 25165824 540 130560 0 7636500 99.881 3071924 4261 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 01:04:34] CVMFS is ok
[2026-05-01 01:04:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 01:04:34] Checking for apptainer binary...
[2026-05-01 01:04:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 01:04:34] Running /usr/bin/apptainer --version
[2026-05-01 01:04:34] apptainer version 1.3.2-1.el7
[2026-05-01 01:04:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 01:04:41] cg-vwn406.simple-grid.lan
[2026-05-01 01:04:41] apptainer works
[2026-05-01 01:04:41] Set ATHENA_PROC_NUMBER=8
[2026-05-01 01:04:41] Set ATHENA_CORE_NUMBER=8
[2026-05-01 01:04:41] Starting ATLAS job with PandaID=7122780620
[2026-05-01 01:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 05:46:14]  *** The last 200 lines of the pilot log: ***
[2026-05-01 05:46:14] 2026-05-01 03:45:17,550 | INFO     | this job has now completed (state=finished)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,550 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,550 | INFO     | log transfer has been attempted: DONE
[2026-05-01 05:46:14] 2026-05-01 03:45:17,551 | INFO     | job 7122780620 has finished - writing final server update
[2026-05-01 05:46:14] 2026-05-01 03:45:17,551 | INFO     | total number of processed events: 400 (read)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,553 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7122780620/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,554 | INFO     | extracted standard info from prmon json
[2026-05-01 05:46:14] 2026-05-01 03:45:17,554 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 05:46:14] 2026-05-01 03:45:17,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 05:46:14] 2026-05-01 03:45:17,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 05:46:14] 2026-05-01 03:45:17,560 | INFO     | fitting pss+swap vs Time
[2026-05-01 05:46:14] 2026-05-01 03:45:17,561 | INFO     | sum of square deviations: 5705372090.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,563 | INFO     | sum of deviations: 70981503840.5
[2026-05-01 05:46:14] 2026-05-01 03:45:17,563 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,564 | INFO     | mean y: 2502912.7234848486
[2026-05-01 05:46:14] 2026-05-01 03:45:17,564 | INFO     | intersect: 2502912.7234848486
[2026-05-01 05:46:14] 2026-05-01 03:45:17,564 | INFO     | chi2: 5.483534658981334
[2026-05-01 05:46:14] 2026-05-01 03:45:17,565 | INFO     | sum of square deviations: 5387301010.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,567 | INFO     | sum of deviations: 69719494452.00002
[2026-05-01 05:46:14] 2026-05-01 03:45:17,567 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,567 | INFO     | mean y: 2502307.583011583
[2026-05-01 05:46:14] 2026-05-01 03:45:17,568 | INFO     | intersect: 2502307.583011583
[2026-05-01 05:46:14] 2026-05-01 03:45:17,568 | INFO     | chi2: 5.490031657786919
[2026-05-01 05:46:14] 2026-05-01 03:45:17,568 | INFO     | current chi2=5.490031657786919 (change=-0.11848195023157054 %)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,568 | INFO     | right removable region: 258
[2026-05-01 05:46:14] 2026-05-01 03:45:17,569 | INFO     | sum of square deviations: 5387301010.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,571 | INFO     | sum of deviations: -17985528164.00002
[2026-05-01 05:46:14] 2026-05-01 03:45:17,571 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,572 | INFO     | mean y: 2545523.532818533
[2026-05-01 05:46:14] 2026-05-01 03:45:17,572 | INFO     | intersect: 2545523.532818533
[2026-05-01 05:46:14] 2026-05-01 03:45:17,572 | INFO     | chi2: 1.1401470988048608
[2026-05-01 05:46:14] 2026-05-01 03:45:17,572 | INFO     | current chi2=1.1401470988048608 (change=79.2078071953563 %)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,573 | INFO     | sum of square deviations: 5081276667.5
[2026-05-01 05:46:14] 2026-05-01 03:45:17,575 | INFO     | sum of deviations: -51555249098.00001
[2026-05-01 05:46:14] 2026-05-01 03:45:17,575 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,575 | INFO     | mean y: 2562137.598425197
[2026-05-01 05:46:14] 2026-05-01 03:45:17,576 | INFO     | intersect: 2562137.598425197
[2026-05-01 05:46:14] 2026-05-01 03:45:17,576 | INFO     | chi2: 0.2688472776702469
[2026-05-01 05:46:14] 2026-05-01 03:45:17,576 | INFO     | current chi2=0.2688472776702469 (change=76.41994809686739 %)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,577 | INFO     | sum of square deviations: 4787066500.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,579 | INFO     | sum of deviations: -57121683195.99999
[2026-05-01 05:46:14] 2026-05-01 03:45:17,579 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,579 | INFO     | mean y: 2565022.7269076305
[2026-05-01 05:46:14] 2026-05-01 03:45:17,580 | INFO     | intersect: 2565022.7269076305
[2026-05-01 05:46:14] 2026-05-01 03:45:17,580 | INFO     | chi2: 0.22986188814486191
[2026-05-01 05:46:14] 2026-05-01 03:45:17,580 | INFO     | current chi2=0.22986188814486191 (change=14.500942640454149 %)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,580 | INFO     | left removable region: 15
[2026-05-01 05:46:14] 2026-05-01 03:45:17,581 | INFO     | sum of square deviations: 4449281562.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,583 | INFO     | sum of deviations: -55719493763.999985
[2026-05-01 05:46:14] 2026-05-01 03:45:17,583 | INFO     | mean x (centered): 0.0
[2026-05-01 05:46:14] 2026-05-01 03:45:17,584 | INFO     | mean y: 2565782.53909465
[2026-05-01 05:46:14] 2026-05-01 03:45:17,584 | INFO     | intersect: 2565782.53909465
[2026-05-01 05:46:14] 2026-05-01 03:45:17,584 | INFO     | chi2: 0.2265273544390919
[2026-05-01 05:46:14] 2026-05-01 03:45:17,584 | INFO     | current memory leak: -12.52 B/s (using 243 data points, chi2=0.23)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,585 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | ..............................
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | . Timing measurements:
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | . get job = 0 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | . initial setup = 118 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | . payload setup = 232 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,586 | INFO     | . stage-in = 0 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,587 | INFO     | . payload execution = 16224 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,587 | INFO     | . stage-out = 1 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,587 | INFO     | . log creation = 0 s
[2026-05-01 05:46:14] 2026-05-01 03:45:17,587 | INFO     | ..............................
[2026-05-01 05:46:14] 2026-05-01 03:45:18,160 | INFO     | 
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | job summary report
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | --------------------------------------------------
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | PanDA job id: 7122780620
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | task id: 50017241
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | errors: (none)
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | pilot state: finished 
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | transexitcode: 0
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | exeerrorcode: 0
[2026-05-01 05:46:14] 2026-05-01 03:45:18,161 | INFO     | exeerrordiag: 
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | exitcode: 0
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | exitmsg: OK
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | cpuconsumptiontime: 92034 s
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | nevents: 400
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | neventsw: 0
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | pid: 20573
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | pgrp: 20573
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | corecount: 8
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | event service: False
[2026-05-01 05:46:14] 2026-05-01 03:45:18,162 | INFO     | sizes: {0: 2276491, 1: 2276948, 2: 2278376, 12: 2278404, 16460: 2310148, 16461: 2310147, 16462: 2319329, 16464: 2319385, 16466: 2319579}
[2026-05-01 05:46:14] 2026-05-01 03:45:18,163 | INFO     | --------------------------------------------------
[2026-05-01 05:46:14] 2026-05-01 03:45:18,163 | INFO     | 
[2026-05-01 05:46:14] 2026-05-01 03:45:18,163 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,200 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,201 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | job 7122780620 has completed (purged errors)
[2026-05-01 05:46:14] 2026-05-01 03:45:18,202 | INFO     | overall cleanup function is called
[2026-05-01 05:46:14] 2026-05-01 03:45:19,211 | INFO     | --- collectZombieJob: --- 10, [20573]
[2026-05-01 05:46:14] 2026-05-01 03:45:19,211 | INFO     | zombie collector waiting for pid 20573
[2026-05-01 05:46:14] 2026-05-01 03:45:19,211 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 05:46:14] 2026-05-01 03:45:19,211 | INFO     | collected zombie processes
[2026-05-01 05:46:14] 2026-05-01 03:45:19,211 | INFO     | will attempt to kill all subprocesses of pid=20573
[2026-05-01 05:46:14] 2026-05-01 03:45:19,266 | INFO     | process IDs to be killed: [20573] (in reverse order)
[2026-05-01 05:46:14] 2026-05-01 03:45:19,330 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 05:46:14] 2026-05-01 03:45:19,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 05:46:14] 2026-05-01 03:45:19,332 | INFO     | did not find any defunct processes belonging to 20573
[2026-05-01 05:46:14] 2026-05-01 03:45:19,334 | INFO     | did not find any defunct processes belonging to 20573
[2026-05-01 05:46:14] 2026-05-01 03:45:19,334 | INFO     | Ready for new job
[2026-05-01 05:46:14] 2026-05-01 03:45:19,336 | INFO     | ***************************************
[2026-05-01 05:46:14] 2026-05-01 03:45:19,336 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 05:46:14] 2026-05-01 03:45:19,336 | INFO     | ***************************************
[2026-05-01 05:46:14] 2026-05-01 03:45:19,336 | INFO     | 
[2026-05-01 05:46:14] 2026-05-01 03:45:19,337 | INFO     | pilot is running in a VM
[2026-05-01 05:46:14] 2026-05-01 03:45:19,337 | INFO     | architecture information:
[2026-05-01 05:46:14] 2026-05-01 03:45:19,338 | INFO     | executing command: cat /etc/os-release
[2026-05-01 05:46:14] 2026-05-01 03:45:19,359 | INFO     | cat /etc/os-release:
[2026-05-01 05:46:14] NAME="CentOS Linux"
[2026-05-01 05:46:14] VERSION="7 (Core)"
[2026-05-01 05:46:14] ID="centos"
[2026-05-01 05:46:14] ID_LIKE="rhel fedora"
[2026-05-01 05:46:14] VERSION_ID="7"
[2026-05-01 05:46:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 05:46:14] ANSI_COLOR="0;31"
[2026-05-01 05:46:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 05:46:14] HOME_URL="https://www.centos.org/"
[2026-05-01 05:46:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 05:46:14] 
[2026-05-01 05:46:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 05:46:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 05:46:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 05:46:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 05:46:14] 
[2026-05-01 05:46:14] 2026-05-01 03:45:19,359 | INFO     | ***************************************
[2026-05-01 05:46:14] 2026-05-01 03:45:19,860 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-05-01 05:46:14] 2026-05-01 03:45:19,884 | INFO     | sufficient remaining disk space (497104715776 B)
[2026-05-01 05:46:14] 2026-05-01 03:45:19,885 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 05:46:14] 2026-05-01 03:45:19,885 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 05:46:14] 2026-05-01 03:45:19,885 | INFO     | update_server=False
[2026-05-01 05:46:14] 2026-05-01 03:45:19,885 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 05:46:14] 2026-05-01 03:45:19,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 05:46:14] 2026-05-01 03:45:19,886 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 05:46:14] 2026-05-01 03:45:19,886 | INFO     | aborting loop
[2026-05-01 05:46:14] 2026-05-01 03:45:20,200 | INFO     | all payload control threads have been joined
[2026-05-01 05:46:14] 2026-05-01 03:45:20,598 | INFO     | all data control threads have been joined
[2026-05-01 05:46:14] 2026-05-01 03:45:20,870 | INFO     | all job control threads have been joined
[2026-05-01 05:46:14] 2026-05-01 03:45:20,886 | INFO     | [job] retrieve thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:20,891 | INFO     | [job] job monitor thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,009 | INFO     | [data] copytool_in thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,068 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,172 | INFO     | [payload] failed_post thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,206 | INFO     | [payload] control thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,604 | INFO     | [data] control thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,699 | INFO     | [job] validate thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,717 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,839 | INFO     | [payload] validate_post thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,875 | INFO     | [job] control thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:21,892 | INFO     | [data] copytool_out thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:22,182 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:22,200 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:22,295 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 05:46:14] 2026-05-01 03:45:22,712 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 05:46:14] 2026-05-01 03:45:23,718 | INFO     | [job] queue monitor thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:26,301 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 05:46:14] 2026-05-01 03:45:50,927 | INFO     | PID=16095 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 05:46:14] 2026-05-01 03:45:50,927 | INFO     | .. there are 2 such processes running
[2026-05-01 05:46:14] 2026-05-01 03:45:50,928 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 05:46:14] 2026-05-01 03:45:50,928 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 05:46:14] 2026-05-01 03:45:50,928 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 05:46:14] 2026-05-01 03:46:07,120 | INFO     | [monitor] cgroup control has ended
[2026-05-01 05:46:14] 2026-05-01 03:46:08,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374477002560)>', '<ExcThread(monitor, started 140373817026304)>']
[2026-05-01 05:46:14] 2026-05-01 03:46:09,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 05:46:14] 2026-05-01 03:46:09,023 | INFO     | [monitor] control thread has ended
[2026-05-01 05:46:14] 2026-05-01 03:46:13,971 | INFO     | all workflow threads have been joined
[2026-05-01 05:46:14] 2026-05-01 03:46:13,971 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 05:46:14] 2026-05-01 03:46:13,972 | INFO     | traces error code: 0
[2026-05-01 05:46:14] 2026-05-01 03:46:13,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 05:46:14] 2026-05-01 03:46:14,126 [wrapper] ==== pilot stdout END ====
[2026-05-01 05:46:14] 2026-05-01 03:46:14,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 05:46:14] 2026-05-01 03:46:14,136 [wrapper] pilotpid: 16095
[2026-05-01 05:46:14] 2026-05-01 03:46:14,140 [wrapper] Pilot exit status: 0
[2026-05-01 05:46:14] 2026-05-01 03:46:14,161 [wrapper] pandaids: 7122780620
[2026-05-01 05:46:14] 2026-05-01 03:46:14,205 [wrapper] cleanup supervisor_pilot 30081 16096
[2026-05-01 05:46:14] 2026-05-01 03:46:14,210 [wrapper] Test setup, not cleaning
[2026-05-01 05:46:14] 2026-05-01 03:46:14,216 [wrapper] apfmon messages muted
[2026-05-01 05:46:14] 2026-05-01 03:46:14,220 [wrapper] ==== wrapper stdout END ====
[2026-05-01 05:46:14] 2026-05-01 03:46:14,224 [wrapper] ==== wrapper stderr END ====
[2026-05-01 05:46:14]  *** Error codes and diagnostics ***
[2026-05-01 05:46:14]     "exeErrorCode": 0,
[2026-05-01 05:46:14]     "pilotErrorCode": 0,
[2026-05-01 05:46:14]  *** Listing of results directory ***
[2026-05-01 05:46:14] total 490200
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc    683926 Apr 30 15:39 pilot3.tar.gz
[2026-05-01 05:46:14] -rwx------. 1 boinc boinc     36322 Apr 30 15:40 runpilot2-wrapper.sh
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc      5631 Apr 30 15:41 queuedata.json
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc       100 May  1 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 05:46:14] -rwxr-xr-x. 1 boinc boinc      7986 May  1 01:04 run_atlas
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc       105 May  1 01:04 job.xml
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc      6307 May  1 01:04 init_data.xml
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc 314597345 May  1 01:04 EVNT.50017236._000019.pool.root.1
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc     15667 May  1 01:04 start_atlas.sh
[2026-05-01 05:46:14] drwxrwx--x. 2 boinc boinc        68 May  1 01:04 shared
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc    697410 May  1 01:04 input.tar.gz
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc         0 May  1 01:04 boinc_lockfile
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc      2563 May  1 01:04 pandaJob.out
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc       415 May  1 01:10 workernode_map.json
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc   1001806 May  1 01:10 agis_schedconf.cvmfs.json
[2026-05-01 05:46:14] drwx------. 5 boinc boinc      4096 May  1 01:10 pilot3
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc 179312449 May  1 05:44 HITS.50017241._000473.pool.root.1
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc       489 May  1 05:44 boinc_task_state.xml
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc      1010 May  1 05:45 memory_monitor_summary.json
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc   1510091 May  1 05:45 agis_ddmendpoints.agis.ALL.json
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc    431419 May  1 05:45 log.50017241._000473.job.log.tgz.1
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc      6333 May  1 05:45 heartbeat_new.json
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc      6224 May  1 05:45 heartbeat.json
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc        95 May  1 05:45 pilot_heartbeat.json
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc      8192 May  1 05:46 boinc_mmap_file
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc        28 May  1 05:46 wrapper_checkpoint.txt
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc      4883 May  1 05:46 pilotlog.txt
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc   1534151 May  1 05:46 log.50017241._000473.job.log.1
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc       357 May  1 05:46 output.list
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc       410 May  1 05:46 runtime_log
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc   1986560 May  1 05:46 result.tar.gz
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc      8439 May  1 05:46 runtime_log.err
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc       656 May  1 05:46 5bd61b89acaf.diag
[2026-05-01 05:46:14] -rw-r--r--. 1 boinc boinc     20661 May  1 05:46 stderr.txt
[2026-05-01 05:46:14] HITS file was successfully produced:
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc 179312449 May  1 05:44 shared/HITS.pool.root.1
[2026-05-01 05:46:14]  *** Contents of shared directory: ***
[2026-05-01 05:46:14] total 484976
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc 314597345 May  1 01:04 ATLAS.root_0
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc     15667 May  1 01:04 start_atlas.sh
[2026-05-01 05:46:14] -rw-r--r--. 2 boinc boinc    697410 May  1 01:04 input.tar.gz
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc 179312449 May  1 05:44 HITS.pool.root.1
[2026-05-01 05:46:14] -rw-------. 1 boinc boinc   1986560 May  1 05:46 result.tar.gz
05:46:15 (12000): run_atlas exited; CPU time 92184.902830
05:46:15 (12000): called boinc_finish(0)

</stderr_txt>
]]>

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