Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:31:59 (18807): wrapper (7.7.26015): starting
04:31:59 (18807): wrapper: running run_atlas (--nthreads 8)
[2026-05-01 04:31:59] Arguments: --nthreads 8
[2026-05-01 04:31:59] Threads: 8
[2026-05-01 04:31:59] Checking for CVMFS
[2026-05-01 04:32:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-05-01 04:32:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-05-01 04:32:03] Running cvmfs_config stat atlas.cern.ch
[2026-05-01 04:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-05-01 04:32:05] 2.11.2.0 15723 22168 99896 159074 2 54 18426215 25165825 96 130560 0 6180297 99.908 5316017 9202 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-05-01 04:32:05] CVMFS is ok
[2026-05-01 04:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 04:32:05] Checking for apptainer binary...
[2026-05-01 04:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-05-01 04:32:05] Running /usr/bin/apptainer --version
[2026-05-01 04:32:05] apptainer version 1.3.2-1.el7
[2026-05-01 04:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 04:32:14] cg-vwn428.simple-grid.lan
[2026-05-01 04:32:14] apptainer works
[2026-05-01 04:32:14] Set ATHENA_PROC_NUMBER=8
[2026-05-01 04:32:14] Set ATHENA_CORE_NUMBER=8
[2026-05-01 04:32:14] Starting ATLAS job with PandaID=7122779951
[2026-05-01 04:32:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 09:03:02]  *** The last 200 lines of the pilot log: ***
[2026-05-01 09:03:02] 2026-05-01 07:02:10,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 09:03:02] 2026-05-01 07:02:10,782 | INFO     | fitting pss+swap vs Time
[2026-05-01 09:03:02] 2026-05-01 07:02:10,783 | INFO     | sum of square deviations: 5141528960.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,785 | INFO     | sum of deviations: 155049010477.00006
[2026-05-01 09:03:02] 2026-05-01 07:02:10,785 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,785 | INFO     | mean y: 2433773.8549019606
[2026-05-01 09:03:02] 2026-05-01 07:02:10,785 | INFO     | intersect: 2433773.8549019606
[2026-05-01 09:03:02] 2026-05-01 07:02:10,786 | INFO     | chi2: 10.263914117518581
[2026-05-01 09:03:02] 2026-05-01 07:02:10,786 | INFO     | sum of square deviations: 4844974562.5
[2026-05-01 09:03:02] 2026-05-01 07:02:10,789 | INFO     | sum of deviations: 168791066138.00003
[2026-05-01 09:03:02] 2026-05-01 07:02:10,789 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,789 | INFO     | mean y: 2440700.496
[2026-05-01 09:03:02] 2026-05-01 07:02:10,789 | INFO     | intersect: 2440700.496
[2026-05-01 09:03:02] 2026-05-01 07:02:10,790 | INFO     | chi2: 9.584118809029214
[2026-05-01 09:03:02] 2026-05-01 07:02:10,790 | INFO     | current chi2=9.584118809029214 (change=6.623158579718476 %)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,790 | INFO     | right removable region: 249
[2026-05-01 09:03:02] 2026-05-01 07:02:10,790 | INFO     | sum of square deviations: 4844974562.5
[2026-05-01 09:03:02] 2026-05-01 07:02:10,792 | INFO     | sum of deviations: 62679397832.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,793 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,793 | INFO     | mean y: 2481264.336
[2026-05-01 09:03:02] 2026-05-01 07:02:10,793 | INFO     | intersect: 2481264.336
[2026-05-01 09:03:02] 2026-05-01 07:02:10,793 | INFO     | chi2: 4.682498406174431
[2026-05-01 09:03:02] 2026-05-01 07:02:10,794 | INFO     | current chi2=4.682498406174431 (change=54.379018057231384 %)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,794 | INFO     | sum of square deviations: 4560048290.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,796 | INFO     | sum of deviations: -10796745446.999996
[2026-05-01 09:03:02] 2026-05-01 07:02:10,796 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,796 | INFO     | mean y: 2520554.3061224488
[2026-05-01 09:03:02] 2026-05-01 07:02:10,797 | INFO     | intersect: 2520554.3061224488
[2026-05-01 09:03:02] 2026-05-01 07:02:10,797 | INFO     | chi2: 1.439033804285077
[2026-05-01 09:03:02] 2026-05-01 07:02:10,797 | INFO     | current chi2=1.439033804285077 (change=69.26782073459886 %)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,798 | INFO     | sum of square deviations: 4286517580.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,800 | INFO     | sum of deviations: -34236756849.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,800 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,800 | INFO     | mean y: 2533512.4166666665
[2026-05-01 09:03:02] 2026-05-01 07:02:10,800 | INFO     | intersect: 2533512.4166666665
[2026-05-01 09:03:02] 2026-05-01 07:02:10,800 | INFO     | chi2: 0.9150403926884709
[2026-05-01 09:03:02] 2026-05-01 07:02:10,801 | INFO     | current chi2=0.9150403926884709 (change=36.41286327230721 %)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,801 | INFO     | sum of square deviations: 4024149870.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,803 | INFO     | sum of deviations: -26903443842.999996
[2026-05-01 09:03:02] 2026-05-01 07:02:10,803 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,803 | INFO     | mean y: 2529243.9276595744
[2026-05-01 09:03:02] 2026-05-01 07:02:10,803 | INFO     | intersect: 2529243.9276595744
[2026-05-01 09:03:02] 2026-05-01 07:02:10,804 | INFO     | chi2: 0.8948219511285174
[2026-05-01 09:03:02] 2026-05-01 07:02:10,804 | INFO     | current chi2=0.8948219511285174 (change=2.2095682028363752 %)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,804 | INFO     | left removable region: 20
[2026-05-01 09:03:02] 2026-05-01 07:02:10,805 | INFO     | sum of square deviations: 3723716330.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,807 | INFO     | sum of deviations: -10781200694.999998
[2026-05-01 09:03:02] 2026-05-01 07:02:10,807 | INFO     | mean x (centered): 0.0
[2026-05-01 09:03:02] 2026-05-01 07:02:10,807 | INFO     | mean y: 2538857.7161572054
[2026-05-01 09:03:02] 2026-05-01 07:02:10,807 | INFO     | intersect: 2538857.7161572054
[2026-05-01 09:03:02] 2026-05-01 07:02:10,807 | INFO     | chi2: 0.10233240136569667
[2026-05-01 09:03:02] 2026-05-01 07:02:10,808 | INFO     | current memory leak: -2.90 B/s (using 229 data points, chi2=0.10)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,808 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | ..............................
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . Timing measurements:
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . get job = 0 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . initial setup = 119 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . payload setup = 162 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . stage-in = 0 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . payload execution = 15638 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . stage-out = 3 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | . log creation = 1 s
[2026-05-01 09:03:02] 2026-05-01 07:02:10,809 | INFO     | ..............................
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | 
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | job summary report
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | --------------------------------------------------
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | PanDA job id: 7122779951
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | task id: 50017065
[2026-05-01 09:03:02] 2026-05-01 07:02:11,245 | INFO     | errors: (none)
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | pilot state: finished 
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | transexitcode: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | exeerrorcode: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | exeerrordiag: 
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | exitcode: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | exitmsg: OK
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | cpuconsumptiontime: 58539 s
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | nevents: 400
[2026-05-01 09:03:02] 2026-05-01 07:02:11,246 | INFO     | neventsw: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | pid: 27256
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | pgrp: 27256
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | corecount: 8
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | event service: False
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | sizes: {0: 2275835, 1: 2276520, 2: 2278349, 13: 2278349, 15806: 2309692, 15810: 2318690, 15811: 2318874, 15812: 2319068}
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | --------------------------------------------------
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | 
[2026-05-01 09:03:02] 2026-05-01 07:02:11,247 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-01 09:03:02] 2026-05-01 07:02:11,745 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,746 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 09:03:02] 2026-05-01 07:02:11,747 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,748 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 09:03:02] 2026-05-01 07:02:11,748 | INFO     | job 7122779951 has completed (purged errors)
[2026-05-01 09:03:02] 2026-05-01 07:02:11,748 | INFO     | overall cleanup function is called
[2026-05-01 09:03:02] 2026-05-01 07:02:12,026 | INFO     | PID=22781 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 09:03:02] 2026-05-01 07:02:12,026 | INFO     | .. there are 2 such processes running
[2026-05-01 09:03:02] 2026-05-01 07:02:12,757 | INFO     | --- collectZombieJob: --- 10, [27256]
[2026-05-01 09:03:02] 2026-05-01 07:02:12,757 | INFO     | zombie collector waiting for pid 27256
[2026-05-01 09:03:02] 2026-05-01 07:02:12,757 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 09:03:02] 2026-05-01 07:02:12,757 | INFO     | collected zombie processes
[2026-05-01 09:03:02] 2026-05-01 07:02:12,757 | INFO     | will attempt to kill all subprocesses of pid=27256
[2026-05-01 09:03:02] 2026-05-01 07:02:12,821 | INFO     | process IDs to be killed: [27256] (in reverse order)
[2026-05-01 09:03:02] 2026-05-01 07:02:13,896 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 09:03:02] 2026-05-01 07:02:13,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 09:03:02] 2026-05-01 07:02:13,899 | INFO     | did not find any defunct processes belonging to 27256
[2026-05-01 09:03:02] 2026-05-01 07:02:13,901 | INFO     | did not find any defunct processes belonging to 27256
[2026-05-01 09:03:02] 2026-05-01 07:02:13,901 | INFO     | Ready for new job
[2026-05-01 09:03:02] 2026-05-01 07:02:13,903 | INFO     | ***************************************
[2026-05-01 09:03:02] 2026-05-01 07:02:13,903 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 09:03:02] 2026-05-01 07:02:13,903 | INFO     | ***************************************
[2026-05-01 09:03:02] 2026-05-01 07:02:13,903 | INFO     | 
[2026-05-01 09:03:02] 2026-05-01 07:02:13,904 | INFO     | pilot is running in a VM
[2026-05-01 09:03:02] 2026-05-01 07:02:13,904 | INFO     | architecture information:
[2026-05-01 09:03:02] 2026-05-01 07:02:13,904 | INFO     | executing command: cat /etc/os-release
[2026-05-01 09:03:02] 2026-05-01 07:02:14,209 | INFO     | cat /etc/os-release:
[2026-05-01 09:03:02] NAME="CentOS Linux"
[2026-05-01 09:03:02] VERSION="7 (Core)"
[2026-05-01 09:03:02] ID="centos"
[2026-05-01 09:03:02] ID_LIKE="rhel fedora"
[2026-05-01 09:03:02] VERSION_ID="7"
[2026-05-01 09:03:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 09:03:02] ANSI_COLOR="0;31"
[2026-05-01 09:03:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 09:03:02] HOME_URL="https://www.centos.org/"
[2026-05-01 09:03:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 09:03:02] 
[2026-05-01 09:03:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 09:03:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 09:03:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 09:03:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 09:03:02] 
[2026-05-01 09:03:02] 2026-05-01 07:02:14,210 | INFO     | ***************************************
[2026-05-01 09:03:02] 2026-05-01 07:02:14,713 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-01 09:03:02] 2026-05-01 07:02:14,920 | INFO     | sufficient remaining disk space (494925774848 B)
[2026-05-01 09:03:02] 2026-05-01 07:02:14,920 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 09:03:02] 2026-05-01 07:02:14,920 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 09:03:02] 2026-05-01 07:02:14,920 | INFO     | update_server=False
[2026-05-01 09:03:02] 2026-05-01 07:02:14,921 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 09:03:02] 2026-05-01 07:02:14,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 09:03:02] 2026-05-01 07:02:15,022 | INFO     | all data control threads have been joined
[2026-05-01 09:03:02] 2026-05-01 07:02:15,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:03:02] 2026-05-01 07:02:15,299 | INFO     | aborting loop
[2026-05-01 09:03:02] 2026-05-01 07:02:15,594 | INFO     | all payload control threads have been joined
[2026-05-01 09:03:02] 2026-05-01 07:02:15,927 | INFO     | [job] retrieve thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:15,934 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:15,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:03:02] 2026-05-01 07:02:16,028 | INFO     | [data] control thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,149 | INFO     | [payload] failed_post thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 09:03:02] 2026-05-01 07:02:16,305 | INFO     | [job] job monitor thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,402 | INFO     | [data] copytool_in thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,426 | INFO     | [job] validate thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,547 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,600 | INFO     | [payload] control thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,606 | INFO     | all job control threads have been joined
[2026-05-01 09:03:02] 2026-05-01 07:02:16,838 | INFO     | [payload] validate_post thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,842 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,903 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,929 | INFO     | [data] copytool_out thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:16,966 | INFO     | [job] queue monitor thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:17,612 | INFO     | [job] control thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:20,261 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 09:03:02] 2026-05-01 07:02:44,173 | INFO     | PID=22781 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 09:03:02] 2026-05-01 07:02:44,174 | INFO     | .. there are 2 such processes running
[2026-05-01 09:03:02] 2026-05-01 07:02:44,174 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 09:03:02] 2026-05-01 07:02:44,174 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 09:03:02] 2026-05-01 07:02:44,174 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 09:03:02] 2026-05-01 07:02:52,401 | INFO     | [monitor] cgroup control has ended
[2026-05-01 09:03:02] 2026-05-01 07:02:52,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532041664320)>', '<ExcThread(monitor, started 140531380246272)>']
[2026-05-01 09:03:02] 2026-05-01 07:02:53,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 09:03:02] 2026-05-01 07:02:53,228 | INFO     | [monitor] control thread has ended
[2026-05-01 09:03:02] 2026-05-01 07:02:57,436 | INFO     | all workflow threads have been joined
[2026-05-01 09:03:02] 2026-05-01 07:02:57,436 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 09:03:02] 2026-05-01 07:02:57,436 | INFO     | traces error code: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:57,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 09:03:02] 2026-05-01 07:02:57,845 [wrapper] ==== pilot stdout END ====
[2026-05-01 09:03:02] 2026-05-01 07:02:57,969 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 09:03:02] 2026-05-01 07:02:58,034 [wrapper] pilotpid: 22781
[2026-05-01 09:03:02] 2026-05-01 07:02:58,172 [wrapper] Pilot exit status: 0
[2026-05-01 09:03:02] 2026-05-01 07:02:58,646 [wrapper] pandaids: 7122779951
[2026-05-01 09:03:02] 2026-05-01 07:02:59,563 [wrapper] cleanup supervisor_pilot  2077 22782
[2026-05-01 09:03:02] 2026-05-01 07:02:59,661 [wrapper] Test setup, not cleaning
[2026-05-01 09:03:02] 2026-05-01 07:02:59,718 [wrapper] apfmon messages muted
[2026-05-01 09:03:02] 2026-05-01 07:02:59,771 [wrapper] ==== wrapper stdout END ====
[2026-05-01 09:03:02] 2026-05-01 07:02:59,874 [wrapper] ==== wrapper stderr END ====
[2026-05-01 09:03:02]  *** Error codes and diagnostics ***
[2026-05-01 09:03:02]     "exeErrorCode": 0,
[2026-05-01 09:03:02]     "pilotErrorCode": 0,
[2026-05-01 09:03:02]  *** Listing of results directory ***
[2026-05-01 09:03:02] total 489936
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc    683926 Apr 30 15:39 pilot3.tar.gz
[2026-05-01 09:03:02] -rwx------. 1 boinc boinc     36322 Apr 30 15:39 runpilot2-wrapper.sh
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc      5631 Apr 30 15:39 queuedata.json
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc       100 May  1 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 09:03:02] -rwxr-xr-x. 1 boinc boinc      7986 May  1 04:31 run_atlas
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc       105 May  1 04:31 job.xml
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc      6307 May  1 04:31 init_data.xml
[2026-05-01 09:03:02] -rw-r--r--. 2 boinc boinc 318704134 May  1 04:31 EVNT.50017059._000049.pool.root.1
[2026-05-01 09:03:02] -rw-r--r--. 2 boinc boinc     15667 May  1 04:31 start_atlas.sh
[2026-05-01 09:03:02] drwxrwx--x. 2 boinc boinc        68 May  1 04:31 shared
[2026-05-01 09:03:02] -rw-r--r--. 2 boinc boinc    697391 May  1 04:31 input.tar.gz
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc         0 May  1 04:31 boinc_lockfile
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc      2510 May  1 04:32 pandaJob.out
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc       415 May  1 04:38 workernode_map.json
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc   1001806 May  1 04:38 agis_schedconf.cvmfs.json
[2026-05-01 09:03:02] drwx------. 5 boinc boinc      4096 May  1 04:38 pilot3
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc 175134716 May  1 09:00 HITS.50017065._001209.pool.root.1
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc       489 May  1 09:00 boinc_task_state.xml
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc        95 May  1 09:01 pilot_heartbeat.json
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc      1009 May  1 09:02 memory_monitor_summary.json
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc   1510091 May  1 09:02 agis_ddmendpoints.agis.ALL.json
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc    402132 May  1 09:02 log.50017065._001209.job.log.tgz.1
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc      6344 May  1 09:02 heartbeat_new.json
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc      6235 May  1 09:02 heartbeat.json
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc      8192 May  1 09:02 boinc_mmap_file
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc        28 May  1 09:02 wrapper_checkpoint.txt
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc      4883 May  1 09:02 pilotlog.txt
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc   1465135 May  1 09:02 log.50017065._001209.job.log.1
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc       357 May  1 09:03 output.list
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc       410 May  1 09:03 runtime_log
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc   1884160 May  1 09:03 result.tar.gz
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc      8439 May  1 09:03 runtime_log.err
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc       655 May  1 09:03 5b8ba1f38c84.diag
[2026-05-01 09:03:02] -rw-r--r--. 1 boinc boinc     20508 May  1 09:03 stderr.txt
[2026-05-01 09:03:02] HITS file was successfully produced:
[2026-05-01 09:03:02] -rw-------. 1 boinc boinc 175134716 May  1 09:00 shared/HITS.pool.root.1
[2026-05-01 09:03:02]  *** Contents of shared directory: ***
[2026-05-01 09:03:03] total 484808
[2026-05-01 09:03:03] -rw-r--r--. 2 boinc boinc 318704134 May  1 04:31 ATLAS.root_0
[2026-05-01 09:03:03] -rw-r--r--. 2 boinc boinc     15667 May  1 04:31 start_atlas.sh
[2026-05-01 09:03:03] -rw-r--r--. 2 boinc boinc    697391 May  1 04:31 input.tar.gz
[2026-05-01 09:03:03] -rw-------. 1 boinc boinc 175134716 May  1 09:00 HITS.pool.root.1
[2026-05-01 09:03:03] -rw-------. 1 boinc boinc   1884160 May  1 09:03 result.tar.gz
09:03:04 (18807): run_atlas exited; CPU time 58687.173578
09:03:04 (18807): called boinc_finish(0)

</stderr_txt>
]]>

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