Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:22:43 (47943): wrapper (7.7.26015): starting
11:22:43 (47943): wrapper: running run_atlas (--nthreads 10)
[2026-04-30 11:22:43] Arguments: --nthreads 10
[2026-04-30 11:22:43] Threads: 10
[2026-04-30 11:22:43] Checking for CVMFS
[2026-04-30 11:22:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 11:22:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 11:22:43] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 11:22:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 11:22:43] 2.13.3.0 9206 11 49464 159056 1 80 32263733 39288833 1939 16776704 0 130691 99.983 2972 43705 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-30 11:22:43] CVMFS is ok
[2026-04-30 11:22:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 11:22:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 11:22:43] Further information can be found at the LHC@home message board.
[2026-04-30 11:22:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 11:22:43] Checking for apptainer binary...
[2026-04-30 11:22:43] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 11:22:43] Running /usr/bin/apptainer --version
[2026-04-30 11:22:43] apptainer version 1.4.5-3.el9
[2026-04-30 11:22:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 11:22:44] c-211-20.aglt2.org
[2026-04-30 11:22:44] apptainer works
[2026-04-30 11:22:44] Set ATHENA_PROC_NUMBER=10
[2026-04-30 11:22:44] Set ATHENA_CORE_NUMBER=10
[2026-04-30 11:22:44] Starting ATLAS job with PandaID=7122779600
[2026-04-30 11:22:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 13:30:13]  *** The last 200 lines of the pilot log: ***
[2026-04-30 13:30:13] 2026-04-30 17:29:32,317 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,317 | INFO     | mean y: 2630289.696
[2026-04-30 13:30:13] 2026-04-30 17:29:32,317 | INFO     | intersect: 2630289.696
[2026-04-30 13:30:13] 2026-04-30 17:29:32,318 | INFO     | chi2: 1.9291487476028293
[2026-04-30 13:30:13] 2026-04-30 17:29:32,318 | INFO     | sum of square deviations: 535786790.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,319 | INFO     | sum of deviations: 4253999486.5
[2026-04-30 13:30:13] 2026-04-30 17:29:32,319 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,319 | INFO     | mean y: 2648270.625
[2026-04-30 13:30:13] 2026-04-30 17:29:32,319 | INFO     | intersect: 2648270.625
[2026-04-30 13:30:13] 2026-04-30 17:29:32,320 | INFO     | chi2: 1.2312562251446637
[2026-04-30 13:30:13] 2026-04-30 17:29:32,320 | INFO     | current chi2=1.2312562251446637 (change=36.17619031841742 %)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,320 | INFO     | sum of square deviations: 471562330.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,321 | INFO     | sum of deviations: 4318592417.000002
[2026-04-30 13:30:13] 2026-04-30 17:29:32,321 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,321 | INFO     | mean y: 2648423.243478261
[2026-04-30 13:30:13] 2026-04-30 17:29:32,322 | INFO     | intersect: 2648423.243478261
[2026-04-30 13:30:13] 2026-04-30 17:29:32,322 | INFO     | chi2: 1.2328763051394298
[2026-04-30 13:30:13] 2026-04-30 17:29:32,322 | INFO     | current chi2=1.2328763051394298 (change=-0.13157943583804024 %)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,322 | INFO     | right removable region: 114
[2026-04-30 13:30:13] 2026-04-30 17:29:32,323 | INFO     | sum of square deviations: 535786790.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,323 | INFO     | sum of deviations: -20008174155.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,324 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,324 | INFO     | mean y: 2663963.5166666666
[2026-04-30 13:30:13] 2026-04-30 17:29:32,324 | INFO     | intersect: 2663963.5166666666
[2026-04-30 13:30:13] 2026-04-30 17:29:32,324 | INFO     | chi2: 0.746966126370893
[2026-04-30 13:30:13] 2026-04-30 17:29:32,324 | INFO     | current chi2=0.746966126370893 (change=61.28001392847092 %)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,325 | INFO     | sum of square deviations: 471562330.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,326 | INFO     | sum of deviations: -18216378333.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,326 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,326 | INFO     | mean y: 2659708.5565217393
[2026-04-30 13:30:13] 2026-04-30 17:29:32,326 | INFO     | intersect: 2659708.5565217393
[2026-04-30 13:30:13] 2026-04-30 17:29:32,326 | INFO     | chi2: 0.7474592845873133
[2026-04-30 13:30:13] 2026-04-30 17:29:32,327 | INFO     | current chi2=0.7474592845873133 (change=-0.06602149669306358 %)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,327 | INFO     | left removable region: 10
[2026-04-30 13:30:13] 2026-04-30 17:29:32,327 | INFO     | sum of square deviations: 348769330.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,328 | INFO     | sum of deviations: -9149848323.499998
[2026-04-30 13:30:13] 2026-04-30 17:29:32,328 | INFO     | mean x (centered): 0.0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,328 | INFO     | mean y: 2682694.144230769
[2026-04-30 13:30:13] 2026-04-30 17:29:32,328 | INFO     | intersect: 2682694.144230769
[2026-04-30 13:30:13] 2026-04-30 17:29:32,329 | INFO     | chi2: 0.020612199685040723
[2026-04-30 13:30:13] 2026-04-30 17:29:32,329 | INFO     | current memory leak: -26.23 B/s (using 104 data points, chi2=0.02)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,329 | INFO     | could have reported an average CPU frequency of 2969 MHz (8 samples)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | ..............................
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . Timing measurements:
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . get job = 0 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . initial setup = 5 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . payload setup = 6 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . stage-in = 0 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,330 | INFO     | . payload execution = 7573 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,331 | INFO     | . stage-out = 0 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,331 | INFO     | . log creation = 0 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,331 | INFO     | ..............................
[2026-04-30 13:30:13] 2026-04-30 17:29:32,473 | INFO     | 
[2026-04-30 13:30:13] 2026-04-30 17:29:32,473 | INFO     | job summary report
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | --------------------------------------------------
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | PanDA job id: 7122779600
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | task id: 50017045
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | errors: (none)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | pilot state: finished 
[2026-04-30 13:30:13] 2026-04-30 17:29:32,474 | INFO     | transexitcode: 0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | exeerrorcode: 0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | exeerrordiag: 
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | exitcode: 0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | exitmsg: OK
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | cpuconsumptiontime: 64100 s
[2026-04-30 13:30:13] 2026-04-30 17:29:32,475 | INFO     | nevents: 400
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | neventsw: 0
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | pid: 58122
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | pgrp: 58122
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | corecount: 10
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | event service: False
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | sizes: {0: 2276559, 1: 2278303, 11: 2278331, 7584: 2305756, 7585: 2314754, 7586: 2315132}
[2026-04-30 13:30:13] 2026-04-30 17:29:32,476 | INFO     | --------------------------------------------------
[2026-04-30 13:30:13] 2026-04-30 17:29:32,477 | INFO     | 
[2026-04-30 13:30:13] 2026-04-30 17:29:32,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-04-30 13:30:13] 2026-04-30 17:29:32,496 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,496 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,497 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 13:30:13] 2026-04-30 17:29:32,500 | INFO     | job 7122779600 has completed (purged errors)
[2026-04-30 13:30:13] 2026-04-30 17:29:32,500 | INFO     | overall cleanup function is called
[2026-04-30 13:30:13] 2026-04-30 17:29:33,507 | INFO     | --- collectZombieJob: --- 10, [58122]
[2026-04-30 13:30:13] 2026-04-30 17:29:33,508 | INFO     | zombie collector waiting for pid 58122
[2026-04-30 13:30:13] 2026-04-30 17:29:33,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 13:30:13] 2026-04-30 17:29:33,508 | INFO     | collected zombie processes
[2026-04-30 13:30:13] 2026-04-30 17:29:33,508 | INFO     | will attempt to kill all subprocesses of pid=58122
[2026-04-30 13:30:13] 2026-04-30 17:29:33,749 | INFO     | process IDs to be killed: [58122] (in reverse order)
[2026-04-30 13:30:13] 2026-04-30 17:29:33,824 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 13:30:13] 2026-04-30 17:29:33,824 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 13:30:13] 2026-04-30 17:29:33,836 | INFO     | did not find any defunct processes belonging to 58122
[2026-04-30 13:30:13] 2026-04-30 17:29:33,845 | INFO     | did not find any defunct processes belonging to 58122
[2026-04-30 13:30:13] 2026-04-30 17:29:33,846 | INFO     | Ready for new job
[2026-04-30 13:30:13] 2026-04-30 17:29:33,848 | INFO     | ***************************************
[2026-04-30 13:30:13] 2026-04-30 17:29:33,848 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 13:30:13] 2026-04-30 17:29:33,848 | INFO     | ***************************************
[2026-04-30 13:30:13] 2026-04-30 17:29:33,848 | INFO     | 
[2026-04-30 13:30:13] 2026-04-30 17:29:33,850 | INFO     | architecture information:
[2026-04-30 13:30:13] 2026-04-30 17:29:33,851 | INFO     | executing command: cat /etc/os-release
[2026-04-30 13:30:13] 2026-04-30 17:29:33,865 | INFO     | cat /etc/os-release:
[2026-04-30 13:30:13] NAME="CentOS Linux"
[2026-04-30 13:30:13] VERSION="7 (Core)"
[2026-04-30 13:30:13] ID="centos"
[2026-04-30 13:30:13] ID_LIKE="rhel fedora"
[2026-04-30 13:30:13] VERSION_ID="7"
[2026-04-30 13:30:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 13:30:13] ANSI_COLOR="0;31"
[2026-04-30 13:30:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 13:30:13] HOME_URL="https://www.centos.org/"
[2026-04-30 13:30:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 13:30:13] 
[2026-04-30 13:30:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 13:30:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 13:30:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 13:30:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 13:30:13] 
[2026-04-30 13:30:13] 2026-04-30 17:29:33,865 | INFO     | ***************************************
[2026-04-30 13:30:13] 2026-04-30 17:29:34,368 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-30 13:30:13] 2026-04-30 17:29:34,382 | INFO     | sufficient remaining disk space (50913607680 B)
[2026-04-30 13:30:13] 2026-04-30 17:29:34,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 13:30:13] 2026-04-30 17:29:34,383 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 13:30:13] 2026-04-30 17:29:34,383 | INFO     | update_server=False
[2026-04-30 13:30:13] 2026-04-30 17:29:34,383 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 13:30:13] 2026-04-30 17:29:34,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 13:30:13] 2026-04-30 17:29:34,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 13:30:13] 2026-04-30 17:29:34,492 | INFO     | all data control threads have been joined
[2026-04-30 13:30:13] 2026-04-30 17:29:34,693 | INFO     | all job control threads have been joined
[2026-04-30 13:30:13] 2026-04-30 17:29:35,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 13:30:13] 2026-04-30 17:29:35,276 | INFO     | all payload control threads have been joined
[2026-04-30 13:30:13] 2026-04-30 17:29:35,389 | INFO     | [job] retrieve thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:35,389 | INFO     | [job] queue monitor thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:35,498 | INFO     | [data] control thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:35,699 | INFO     | [job] control thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:35,837 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:35,864 | INFO     | [payload] failed_post thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,131 | INFO     | [job] validate thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,144 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,282 | INFO     | [payload] control thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,287 | INFO     | [payload] validate_post thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,662 | INFO     | [data] copytool_in thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,667 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:36,820 | WARNING  | process 58122 can no longer be monitored (due to stat problems) - aborting
[2026-04-30 13:30:13] 2026-04-30 17:29:37,056 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 13:30:13] 2026-04-30 17:29:37,057 | INFO     | using path: /tmp/boinchome/slots/3/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 13:30:13] 2026-04-30 17:29:37,058 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-04-30 13:30:13] 2026-04-30 17:29:37,058 | WARNING  | maxPSS not found in memory monitor output
[2026-04-30 13:30:13] 2026-04-30 17:29:37,059 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/3/PanDA_Pilot-7122779600/payload.stdout) since it has not been created yet
[2026-04-30 13:30:13] 2026-04-30 17:29:37,059 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-04-30 13:30:13] 2026-04-30 17:29:37,072 | INFO     | sufficient remaining disk space (50910461952 B)
[2026-04-30 13:30:13] 2026-04-30 17:29:37,072 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-04-30 13:30:13] 2026-04-30 17:29:37,073 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-7122779600/HITS.50017045._000980.pool.root.1 since it does not exist
[2026-04-30 13:30:13] 2026-04-30 17:29:37,171 | INFO     | [data] copytool_out thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:37,316 | INFO     | number of running child processes to parent process 58122: 1
[2026-04-30 13:30:13] 2026-04-30 17:29:37,317 | INFO     | maximum number of monitored processes: 6
[2026-04-30 13:30:13] 2026-04-30 17:29:37,317 | INFO     | aborting job monitoring since job object (job id=7122779600) has expired
[2026-04-30 13:30:13] 2026-04-30 17:29:37,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 13:30:13] 2026-04-30 17:29:37,317 | INFO     | will abort loop
[2026-04-30 13:30:13] 2026-04-30 17:29:38,323 | INFO     | [job] job monitor thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:38,390 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:29:45,170 | INFO     | job.realtimelogging is not enabled
[2026-04-30 13:30:13] 2026-04-30 17:29:46,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 13:30:13] 2026-04-30 17:30:05,011 | INFO     | PID=52335 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 13:30:13] 2026-04-30 17:30:05,011 | INFO     | .. there are 5 such processes running
[2026-04-30 13:30:13] 2026-04-30 17:30:05,012 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 13:30:13] 2026-04-30 17:30:05,013 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 13:30:13] 2026-04-30 17:30:05,013 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 13:30:13] 2026-04-30 17:30:07,786 | INFO     | [monitor] cgroup control has ended
[2026-04-30 13:30:13] 2026-04-30 17:30:08,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549535369024)>', '<ExcThread(monitor, started 140549096986368)>']
[2026-04-30 13:30:13] 2026-04-30 17:30:09,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 13:30:13] 2026-04-30 17:30:09,034 | INFO     | [monitor] control thread has ended
[2026-04-30 13:30:13] 2026-04-30 17:30:13,444 | INFO     | all workflow threads have been joined
[2026-04-30 13:30:13] 2026-04-30 17:30:13,444 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 13:30:13] 2026-04-30 17:30:13,445 | INFO     | traces error code: 0
[2026-04-30 13:30:13] 2026-04-30 17:30:13,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 13:30:13] 2026-04-30 17:30:13,578 [wrapper] ==== pilot stdout END ====
[2026-04-30 13:30:13] 2026-04-30 17:30:13,582 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 13:30:13] 2026-04-30 17:30:13,584 [wrapper] pilotpid: 52335
[2026-04-30 13:30:13] 2026-04-30 17:30:13,587 [wrapper] Pilot exit status: 0
[2026-04-30 13:30:13] 2026-04-30 17:30:13,604 [wrapper] pandaids: 7122779600
[2026-04-30 13:30:13] 2026-04-30 17:30:13,653 [wrapper] cleanup supervisor_pilot  218040 52336
[2026-04-30 13:30:13] 2026-04-30 17:30:13,656 [wrapper] Test setup, not cleaning
[2026-04-30 13:30:13] 2026-04-30 17:30:13,659 [wrapper] apfmon messages muted
[2026-04-30 13:30:13] 2026-04-30 17:30:13,662 [wrapper] ==== wrapper stdout END ====
[2026-04-30 13:30:13] 2026-04-30 17:30:13,664 [wrapper] ==== wrapper stderr END ====
[2026-04-30 13:30:13]  *** Error codes and diagnostics ***
[2026-04-30 13:30:13]     "exeErrorCode": 0,
[2026-04-30 13:30:13]     "pilotErrorCode": 0,
[2026-04-30 13:30:13]  *** Listing of results directory ***
[2026-04-30 13:30:13] total 470656
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 09:36 queuedata.json
[2026-04-30 13:30:13] -rwx------. 1 boincer umatlas     36322 Apr 30 09:39 runpilot2-wrapper.sh
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 09:39 pilot3.tar.gz
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas       100 Apr 30 11:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 13:30:13] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 11:22 run_atlas
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas       105 Apr 30 11:22 job.xml
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas 314814554 Apr 30 11:22 EVNT.50017040._000040.pool.root.1
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 11:22 start_atlas.sh
[2026-04-30 13:30:13] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 11:22 shared
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas    697388 Apr 30 11:22 input.tar.gz
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas         0 Apr 30 11:22 boinc_lockfile
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas      2522 Apr 30 11:22 pandaJob.out
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas        57 Apr 30 11:22 setup.sh.local
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas    995207 Apr 30 11:22 agis_schedconf.cvmfs.json
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas   1510091 Apr 30 11:22 agis_ddmendpoints.agis.ALL.json
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas       442 Apr 30 11:22 workernode_map.json
[2026-04-30 13:30:13] drwx------. 5 boincer umatlas      4096 Apr 30 11:22 pilot3
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas 160866525 Apr 30 13:28 HITS.50017045._000980.pool.root.1
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas       487 Apr 30 13:29 boinc_task_state.xml
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas      1032 Apr 30 13:29 memory_monitor_summary.json
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas    354209 Apr 30 13:29 log.50017045._000980.job.log.tgz.1
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas      6400 Apr 30 13:29 heartbeat_new.json
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas      6291 Apr 30 13:29 heartbeat.json
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas      6438 Apr 30 13:30 init_data.xml
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas        95 Apr 30 13:30 pilot_heartbeat.json
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 13:30 boinc_mmap_file
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas        27 Apr 30 13:30 wrapper_checkpoint.txt
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas      6373 Apr 30 13:30 pilotlog.txt
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas    714069 Apr 30 13:30 log.50017045._000980.job.log.1
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas       357 Apr 30 13:30 output.list
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas       410 Apr 30 13:30 runtime_log
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas   1085440 Apr 30 13:30 result.tar.gz
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas      8966 Apr 30 13:30 runtime_log.err
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas       653 Apr 30 13:30 5b80bec14887.diag
[2026-04-30 13:30:13] -rw-r--r--. 1 boincer umatlas     21243 Apr 30 13:30 stderr.txt
[2026-04-30 13:30:13] HITS file was successfully produced:
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas 160866525 Apr 30 13:28 shared/HITS.pool.root.1
[2026-04-30 13:30:13]  *** Contents of shared directory: ***
[2026-04-30 13:30:13] total 466304
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas 314814554 Apr 30 11:22 ATLAS.root_0
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 11:22 start_atlas.sh
[2026-04-30 13:30:13] -rw-r--r--. 2 boincer umatlas    697388 Apr 30 11:22 input.tar.gz
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas 160866525 Apr 30 13:28 HITS.pool.root.1
[2026-04-30 13:30:13] -rw-------. 1 boincer umatlas   1085440 Apr 30 13:30 result.tar.gz
13:30:14 (47943): run_atlas exited; CPU time 64329.308410
13:30:14 (47943): called boinc_finish(0)

</stderr_txt>
]]>

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