Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:54:44 (187131): wrapper (7.7.26015): starting
21:54:44 (187131): wrapper: running run_atlas (--nthreads 4)
[2026-04-30 21:54:45] Arguments: --nthreads 4
[2026-04-30 21:54:45] Threads: 4
[2026-04-30 21:54:45] Checking for CVMFS
[2026-04-30 21:54:45] No cvmfs_config command found, will try listing directly
[2026-04-30 21:54:45] CVMFS is ok
[2026-04-30 21:54:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 21:54:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 21:54:45] Further information can be found at the LHC@home message board.
[2026-04-30 21:54:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 21:54:45] Checking for apptainer binary...
[2026-04-30 21:54:45] which: no apptainer in ((null))
[2026-04-30 21:54:45] apptainer is not installed, using version from CVMFS
[2026-04-30 21:54:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 21:54:45] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot12/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-04-30 21:54:45] apptainer works
[2026-04-30 21:54:45] Set ATHENA_PROC_NUMBER=4
[2026-04-30 21:54:45] Set ATHENA_CORE_NUMBER=4
[2026-04-30 21:54:45] Starting ATLAS job with PandaID=7122777547
[2026-04-30 21:54:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot12/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 00:50:44]  *** The last 200 lines of the pilot log: ***
[2026-05-01 00:50:44] 2026-04-30 22:49:54,346 | INFO     | monitor loop #769: job 0:7122777547 is in state 'finished'
[2026-05-01 00:50:44] 2026-04-30 22:49:54,346 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,350 | INFO     | job 7122777547 has state=finished
[2026-05-01 00:50:44] 2026-04-30 22:49:55,350 | INFO     | preparing for final server update for job 7122777547 in state='finished'
[2026-05-01 00:50:44] 2026-04-30 22:49:55,351 | INFO     | reading metadata from: /var/lib/boinc/var/slot12/slots/11/PanDA_Pilot-7122777547/jobReport.json
[2026-05-01 00:50:44] 2026-04-30 22:49:55,354 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot12/slots/11/workernode_map.json
[2026-05-01 00:50:44] 2026-04-30 22:49:55,354 | INFO     | this job has now completed (state=finished)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,354 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,354 | INFO     | log transfer has been attempted: DONE
[2026-05-01 00:50:44] 2026-04-30 22:49:55,355 | INFO     | job 7122777547 has finished - writing final server update
[2026-05-01 00:50:44] 2026-04-30 22:49:55,355 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3958875/.job.ad'
[2026-05-01 00:50:44] 2026-04-30 22:49:55,355 | INFO     | total number of processed events: 400 (read)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,367 | INFO     | using path: /var/lib/boinc/var/slot12/slots/11/PanDA_Pilot-7122777547/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,368 | INFO     | extracted standard info from prmon json
[2026-05-01 00:50:44] 2026-04-30 22:49:55,368 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 00:50:44] 2026-04-30 22:49:55,368 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 00:50:44] 2026-04-30 22:49:55,368 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 00:50:44] 2026-04-30 22:49:55,372 | INFO     | fitting pss+swap vs Time
[2026-05-01 00:50:44] 2026-04-30 22:49:55,372 | INFO     | sum of square deviations: 1550429070.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,373 | INFO     | sum of deviations: 15366717033.999998
[2026-05-01 00:50:44] 2026-04-30 22:49:55,373 | INFO     | mean x (centered): 0.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,373 | INFO     | mean y: 2334506.4269005847
[2026-05-01 00:50:44] 2026-04-30 22:49:55,373 | INFO     | intersect: 2334506.4269005847
[2026-05-01 00:50:44] 2026-04-30 22:49:55,374 | INFO     | chi2: 1.4962454893095902
[2026-05-01 00:50:44] 2026-04-30 22:49:55,374 | INFO     | sum of square deviations: 1418361477.5
[2026-05-01 00:50:44] 2026-04-30 22:49:55,375 | INFO     | sum of deviations: 14910069661.499998
[2026-05-01 00:50:44] 2026-04-30 22:49:55,375 | INFO     | mean x (centered): 0.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,375 | INFO     | mean y: 2333978.93373494
[2026-05-01 00:50:44] 2026-04-30 22:49:55,375 | INFO     | intersect: 2333978.93373494
[2026-05-01 00:50:44] 2026-04-30 22:49:55,376 | INFO     | chi2: 1.497655339067962
[2026-05-01 00:50:44] 2026-04-30 22:49:55,376 | INFO     | current chi2=1.497655339067962 (change=-0.09422583182004633 %)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,376 | INFO     | right removable region: 165
[2026-05-01 00:50:44] 2026-04-30 22:49:55,376 | INFO     | sum of square deviations: 1418361477.5
[2026-05-01 00:50:44] 2026-04-30 22:49:55,377 | INFO     | sum of deviations: -7932856446.999998
[2026-05-01 00:50:44] 2026-04-30 22:49:55,377 | INFO     | mean x (centered): 0.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,377 | INFO     | mean y: 2361018.506024096
[2026-05-01 00:50:44] 2026-04-30 22:49:55,377 | INFO     | intersect: 2361018.506024096
[2026-05-01 00:50:44] 2026-04-30 22:49:55,378 | INFO     | chi2: 0.052576807236977344
[2026-05-01 00:50:44] 2026-04-30 22:49:55,378 | INFO     | current chi2=0.052576807236977344 (change=96.48608416114672 %)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,378 | INFO     | sum of square deviations: 1294014960.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,379 | INFO     | sum of deviations: -5481285722.999999
[2026-05-01 00:50:44] 2026-04-30 22:49:55,379 | INFO     | mean x (centered): 0.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,379 | INFO     | mean y: 2357984.813664596
[2026-05-01 00:50:44] 2026-04-30 22:49:55,379 | INFO     | intersect: 2357984.813664596
[2026-05-01 00:50:44] 2026-04-30 22:49:55,379 | INFO     | chi2: 0.044849536588294485
[2026-05-01 00:50:44] 2026-04-30 22:49:55,380 | INFO     | current chi2=0.044849536588294485 (change=14.697108962615474 %)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,380 | INFO     | left removable region: 10
[2026-05-01 00:50:44] 2026-04-30 22:49:55,380 | INFO     | sum of square deviations: 1154663510.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | sum of deviations: -5305049708.000001
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | mean x (centered): 0.0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | mean y: 2358216.3225806453
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | intersect: 2358216.3225806453
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | chi2: 0.04457217957602984
[2026-05-01 00:50:44] 2026-04-30 22:49:55,381 | INFO     | current memory leak: -4.59 B/s (using 155 data points, chi2=0.04)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | could have reported an average CPU frequency of 2483 MHz (9 samples)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | ..............................
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | . Timing measurements:
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | . get job = 0 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | . initial setup = 10 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | . payload setup = 24 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,382 | INFO     | . stage-in = 0 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,383 | INFO     | . payload execution = 10427 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,383 | INFO     | . stage-out = 0 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,383 | INFO     | . log creation = 0 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,383 | INFO     | ..............................
[2026-05-01 00:50:44] 2026-04-30 22:49:55,473 | INFO     | 
[2026-05-01 00:50:44] 2026-04-30 22:49:55,473 | INFO     | job summary report
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | --------------------------------------------------
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | PanDA job id: 7122777547
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | task id: 50017045
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | errors: (none)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | pilot state: finished 
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | transexitcode: 0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | exeerrorcode: 0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | exeerrordiag: 
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | exitcode: 0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | exitmsg: OK
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | cpuconsumptiontime: 39106 s
[2026-05-01 00:50:44] 2026-04-30 22:49:55,474 | INFO     | nevents: 400
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | neventsw: 0
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | pid: 196477
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | pgrp: 196477
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | corecount: 4
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | event service: False
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | sizes: {0: 2276514, 1: 2278343, 12: 2278343, 10456: 2306994, 10457: 2316016, 10459: 2316072, 10461: 2316458}
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | --------------------------------------------------
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | 
[2026-05-01 00:50:44] 2026-04-30 22:49:55,475 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot12/slots/11
[2026-05-01 00:50:44] 2026-04-30 22:49:55,505 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,505 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,505 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | job 7122777547 has completed (purged errors)
[2026-05-01 00:50:44] 2026-04-30 22:49:55,507 | INFO     | overall cleanup function is called
[2026-05-01 00:50:44] 2026-04-30 22:49:56,515 | INFO     | --- collectZombieJob: --- 10, [196477]
[2026-05-01 00:50:44] 2026-04-30 22:49:56,515 | INFO     | zombie collector waiting for pid 196477
[2026-05-01 00:50:44] 2026-04-30 22:49:56,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 00:50:44] 2026-04-30 22:49:56,515 | INFO     | collected zombie processes
[2026-05-01 00:50:44] 2026-04-30 22:49:56,515 | INFO     | will attempt to kill all subprocesses of pid=196477
[2026-05-01 00:50:44] 2026-04-30 22:49:56,802 | INFO     | process IDs to be killed: [196477] (in reverse order)
[2026-05-01 00:50:44] 2026-04-30 22:49:56,917 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 00:50:44] 2026-04-30 22:49:56,917 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 00:50:44] 2026-04-30 22:49:56,928 | INFO     | did not find any defunct processes belonging to 196477
[2026-05-01 00:50:44] 2026-04-30 22:49:56,938 | INFO     | did not find any defunct processes belonging to 196477
[2026-05-01 00:50:44] 2026-04-30 22:49:56,938 | INFO     | Ready for new job
[2026-05-01 00:50:44] 2026-04-30 22:49:56,940 | INFO     | ***************************************
[2026-05-01 00:50:44] 2026-04-30 22:49:56,940 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 00:50:44] 2026-04-30 22:49:56,940 | INFO     | ***************************************
[2026-05-01 00:50:44] 2026-04-30 22:49:56,941 | INFO     | 
[2026-05-01 00:50:44] 2026-04-30 22:49:56,944 | INFO     | architecture information:
[2026-05-01 00:50:44] 2026-04-30 22:49:56,945 | INFO     | executing command: cat /etc/os-release
[2026-05-01 00:50:44] 2026-04-30 22:49:56,961 | INFO     | cat /etc/os-release:
[2026-05-01 00:50:44] NAME="CentOS Linux"
[2026-05-01 00:50:44] VERSION="7 (Core)"
[2026-05-01 00:50:44] ID="centos"
[2026-05-01 00:50:44] ID_LIKE="rhel fedora"
[2026-05-01 00:50:44] VERSION_ID="7"
[2026-05-01 00:50:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 00:50:44] ANSI_COLOR="0;31"
[2026-05-01 00:50:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 00:50:44] HOME_URL="https://www.centos.org/"
[2026-05-01 00:50:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 00:50:44] 
[2026-05-01 00:50:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 00:50:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 00:50:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 00:50:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 00:50:44] 
[2026-05-01 00:50:44] 2026-04-30 22:49:56,961 | INFO     | ***************************************
[2026-05-01 00:50:44] 2026-04-30 22:49:57,464 | INFO     | executing command: df -mP /var/lib/boinc/var/slot12/slots/11
[2026-05-01 00:50:44] 2026-04-30 22:49:57,480 | INFO     | sufficient remaining disk space (26286751744 B)
[2026-05-01 00:50:44] 2026-04-30 22:49:57,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 00:50:44] 2026-04-30 22:49:57,480 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 00:50:44] 2026-04-30 22:49:57,480 | INFO     | update_server=False
[2026-05-01 00:50:44] 2026-04-30 22:49:57,480 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 00:50:44] 2026-04-30 22:49:57,690 | INFO     | all data control threads have been joined
[2026-05-01 00:50:44] 2026-04-30 22:49:57,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 00:50:44] 2026-04-30 22:49:57,854 | INFO     | aborting loop
[2026-05-01 00:50:44] 2026-04-30 22:49:58,201 | INFO     | all payload control threads have been joined
[2026-05-01 00:50:44] 2026-04-30 22:49:58,486 | INFO     | [job] retrieve thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:58,696 | INFO     | [data] control thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:58,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 00:50:44] 2026-04-30 22:49:58,859 | INFO     | [job] job monitor thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:58,920 | INFO     | all job control threads have been joined
[2026-05-01 00:50:44] 2026-04-30 22:49:58,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 00:50:44] 2026-04-30 22:49:58,996 | INFO     | [payload] validate_post thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,008 | INFO     | [job] validate thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,084 | INFO     | [payload] failed_post thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,163 | INFO     | [data] copytool_in thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,206 | INFO     | [payload] control thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,703 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,917 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,925 | INFO     | [job] control thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:49:59,953 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:50:00,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 00:50:44] 2026-04-30 22:50:00,925 | INFO     | [data] copytool_out thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:50:01,485 | INFO     | [job] queue monitor thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:50:02,803 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:50:08,103 | INFO     | job.realtimelogging is not enabled
[2026-05-01 00:50:44] 2026-04-30 22:50:09,109 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 00:50:44] 2026-04-30 22:50:27,620 | INFO     | PID=191577 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 00:50:44] 2026-04-30 22:50:27,621 | INFO     | .. there are 15 such processes running
[2026-05-01 00:50:44] 2026-04-30 22:50:27,621 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 00:50:44] 2026-04-30 22:50:27,621 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 00:50:44] 2026-04-30 22:50:27,621 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 00:50:44] 2026-04-30 22:50:38,180 | INFO     | [monitor] cgroup control has ended
[2026-05-01 00:50:44] 2026-04-30 22:50:39,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22881547278144)>', '<ExcThread(monitor, started 22881236940544)>']
[2026-05-01 00:50:44] 2026-04-30 22:50:39,680 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 00:50:44] 2026-04-30 22:50:39,680 | INFO     | [monitor] control thread has ended
[2026-05-01 00:50:44] 2026-04-30 22:50:44,104 | INFO     | all workflow threads have been joined
[2026-05-01 00:50:44] 2026-04-30 22:50:44,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 00:50:44] 2026-04-30 22:50:44,104 | INFO     | traces error code: 0
[2026-05-01 00:50:44] 2026-04-30 22:50:44,104 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 00:50:44] 2026-04-30 22:50:44,230 [wrapper] ==== pilot stdout END ====
[2026-05-01 00:50:44] 2026-04-30 22:50:44,233 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 00:50:44] 2026-04-30 22:50:44,235 [wrapper] pilotpid: 191577
[2026-05-01 00:50:44] 2026-04-30 22:50:44,238 [wrapper] Pilot exit status: 0
[2026-05-01 00:50:44] 2026-04-30 22:50:44,247 [wrapper] pandaids: 7122777547
[2026-05-01 00:50:44] 2026-04-30 22:50:44,319 [wrapper] cleanup supervisor_pilot  411935 191578
[2026-05-01 00:50:44] 2026-04-30 22:50:44,322 [wrapper] Test setup, not cleaning
[2026-05-01 00:50:44] 2026-04-30 22:50:44,326 [wrapper] apfmon messages muted
[2026-05-01 00:50:44] 2026-04-30 22:50:44,329 [wrapper] ==== wrapper stdout END ====
[2026-05-01 00:50:44] 2026-04-30 22:50:44,331 [wrapper] ==== wrapper stderr END ====
[2026-05-01 00:50:44]  *** Error codes and diagnostics ***
[2026-05-01 00:50:44]     "exeErrorCode": 0,
[2026-05-01 00:50:44]     "pilotErrorCode": 0,
[2026-05-01 00:50:44]  *** Listing of results directory ***
[2026-05-01 00:50:44] total 473664
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc    683926 Apr 30 15:02 pilot3.tar.gz
[2026-05-01 00:50:44] -rwx------. 1 boinc boinc     36322 Apr 30 15:06 runpilot2-wrapper.sh
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc      5631 Apr 30 15:06 queuedata.json
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc       100 Apr 30 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 00:50:44] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 21:54 run_atlas
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc       105 Apr 30 21:54 job.xml
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc      6480 Apr 30 21:54 init_data.xml
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc 308791642 Apr 30 21:54 EVNT.50017040._000026.pool.root.1
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc     15667 Apr 30 21:54 start_atlas.sh
[2026-05-01 00:50:44] drwxrwx--x. 2 boinc boinc      4096 Apr 30 21:54 shared
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc    697389 Apr 30 21:54 input.tar.gz
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc         0 Apr 30 21:54 boinc_lockfile
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc      2522 Apr 30 21:54 pandaJob.out
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc    997594 Apr 30 21:55 agis_schedconf.cvmfs.json
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc   1510091 Apr 30 21:55 agis_ddmendpoints.agis.ALL.json
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc       447 Apr 30 21:55 workernode_map.json
[2026-05-01 00:50:44] drwx------. 5 boinc boinc      4096 Apr 30 21:55 pilot3
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc 169517004 May  1 00:49 HITS.50017045._000645.pool.root.1
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc        95 May  1 00:49 pilot_heartbeat.json
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc       488 May  1 00:49 boinc_task_state.xml
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc      1034 May  1 00:49 memory_monitor_summary.json
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc    308577 May  1 00:49 log.50017045._000645.job.log.tgz.1
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc      6415 May  1 00:49 heartbeat_new.json
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc      6306 May  1 00:49 heartbeat.json
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc        28 May  1 00:50 wrapper_checkpoint.txt
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc      4904 May  1 00:50 pilotlog.txt
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc      8192 May  1 00:50 boinc_mmap_file
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc    989095 May  1 00:50 log.50017045._000645.job.log.1
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc       357 May  1 00:50 output.list
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc       410 May  1 00:50 runtime_log
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc   1310720 May  1 00:50 result.tar.gz
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc      8845 May  1 00:50 runtime_log.err
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc       664 May  1 00:50 53b9b24b2dd9.diag
[2026-05-01 00:50:44] -rw-r--r--. 1 boinc boinc     21069 May  1 00:50 stderr.txt
[2026-05-01 00:50:44] HITS file was successfully produced:
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc 169517004 May  1 00:49 shared/HITS.pool.root.1
[2026-05-01 00:50:44]  *** Contents of shared directory: ***
[2026-05-01 00:50:44] total 469088
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc 308791642 Apr 30 21:54 ATLAS.root_0
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc     15667 Apr 30 21:54 start_atlas.sh
[2026-05-01 00:50:44] -rw-r--r--. 2 boinc boinc    697389 Apr 30 21:54 input.tar.gz
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc 169517004 May  1 00:49 HITS.pool.root.1
[2026-05-01 00:50:44] -rw-------. 1 boinc boinc   1310720 May  1 00:50 result.tar.gz
00:50:45 (187131): run_atlas exited; CPU time 39453.212365
00:50:45 (187131): called boinc_finish(0)

</stderr_txt>
]]>

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