Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:50 (645450): wrapper (7.7.26015): starting
07:29:50 (645450): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 07:29:50] Arguments: --nthreads 4
[2026-05-01 07:29:50] Threads: 4
[2026-05-01 07:29:50] Checking for CVMFS
[2026-05-01 07:29:50] No cvmfs_config command found, will try listing directly
[2026-05-01 07:29:50] CVMFS is ok
[2026-05-01 07:29:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 07:29:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 07:29:50] Further information can be found at the LHC@home message board.
[2026-05-01 07:29:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 07:29:50] Checking for apptainer binary...
[2026-05-01 07:29:50] which: no apptainer in ((null))
[2026-05-01 07:29:50] apptainer is not installed, using version from CVMFS
[2026-05-01 07:29:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 07:29:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-05-01 07:29:50] apptainer works
[2026-05-01 07:29:50] Set ATHENA_PROC_NUMBER=4
[2026-05-01 07:29:50] Set ATHENA_CORE_NUMBER=4
[2026-05-01 07:29:50] Starting ATLAS job with PandaID=7122778076
[2026-05-01 07:29:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 10:25:47]  *** The last 200 lines of the pilot log: ***
[2026-05-01 10:25:47] 2026-05-01 08:24:56,743 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/8/workernode_map.json
[2026-05-01 10:25:47] 2026-05-01 08:24:56,743 | INFO     | this job has now completed (state=finished)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,743 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,743 | INFO     | log transfer has been attempted: DONE
[2026-05-01 10:25:47] 2026-05-01 08:24:56,744 | INFO     | job 7122778076 has finished - writing final server update
[2026-05-01 10:25:47] 2026-05-01 08:24:56,744 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2599139/.job.ad'
[2026-05-01 10:25:47] 2026-05-01 08:24:56,744 | INFO     | total number of processed events: 400 (read)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,774 | INFO     | using path: /var/lib/boinc/var/slot20/slots/8/PanDA_Pilot-7122778076/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,774 | INFO     | extracted standard info from prmon json
[2026-05-01 10:25:47] 2026-05-01 08:24:56,775 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 10:25:47] 2026-05-01 08:24:56,775 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 10:25:47] 2026-05-01 08:24:56,775 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 10:25:47] 2026-05-01 08:24:56,778 | INFO     | fitting pss+swap vs Time
[2026-05-01 10:25:47] 2026-05-01 08:24:56,779 | INFO     | sum of square deviations: 1550429070.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | sum of deviations: 14210867684.000004
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | mean x (centered): 0.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | mean y: 2343725.7426900584
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | intersect: 2343725.7426900584
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | chi2: 1.5362868584827882
[2026-05-01 10:25:47] 2026-05-01 08:24:56,780 | INFO     | sum of square deviations: 1418361477.5
[2026-05-01 10:25:47] 2026-05-01 08:24:56,781 | INFO     | sum of deviations: 13800689654.000002
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | mean x (centered): 0.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | mean y: 2343252.0240963856
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | intersect: 2343252.0240963856
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | chi2: 1.5377105444088808
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | current chi2=1.5377105444088808 (change=-0.09267057895024584 %)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | right removable region: 165
[2026-05-01 10:25:47] 2026-05-01 08:24:56,782 | INFO     | sum of square deviations: 1418361477.5
[2026-05-01 10:25:47] 2026-05-01 08:24:56,789 | INFO     | sum of deviations: -10189264686.000002
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | mean x (centered): 0.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | mean y: 2371507.638554217
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | intersect: 2371507.638554217
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | chi2: 0.034744351625772954
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | current chi2=0.034744351625772954 (change=97.73842030647285 %)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,790 | INFO     | sum of square deviations: 1294014960.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,791 | INFO     | sum of deviations: -9442301507.999998
[2026-05-01 10:25:47] 2026-05-01 08:24:56,791 | INFO     | mean x (centered): 0.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | mean y: 2370564.204968944
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | intersect: 2370564.204968944
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | chi2: 0.031096873988805118
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | current chi2=0.031096873988805118 (change=10.498044908865646 %)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | left removable region: 10
[2026-05-01 10:25:47] 2026-05-01 08:24:56,792 | INFO     | sum of square deviations: 1154663510.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,793 | INFO     | sum of deviations: -9108278257.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,793 | INFO     | mean x (centered): 0.0
[2026-05-01 10:25:47] 2026-05-01 08:24:56,793 | INFO     | mean y: 2371003.4
[2026-05-01 10:25:47] 2026-05-01 08:24:56,793 | INFO     | intersect: 2371003.4
[2026-05-01 10:25:47] 2026-05-01 08:24:56,794 | INFO     | chi2: 0.030423118789453724
[2026-05-01 10:25:47] 2026-05-01 08:24:56,794 | INFO     | current memory leak: -7.89 B/s (using 155 data points, chi2=0.03)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,794 | INFO     | could have reported an average CPU frequency of 2692 MHz (9 samples)
[2026-05-01 10:25:47] 2026-05-01 08:24:56,794 | INFO     | ..............................
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . Timing measurements:
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . get job = 0 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . initial setup = 12 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . payload setup = 29 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . stage-in = 0 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . payload execution = 10425 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . stage-out = 0 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | . log creation = 0 s
[2026-05-01 10:25:47] 2026-05-01 08:24:56,795 | INFO     | ..............................
[2026-05-01 10:25:47] 2026-05-01 08:24:57,316 | INFO     | 
[2026-05-01 10:25:47] 2026-05-01 08:24:57,316 | INFO     | job summary report
[2026-05-01 10:25:47] 2026-05-01 08:24:57,316 | INFO     | --------------------------------------------------
[2026-05-01 10:25:47] 2026-05-01 08:24:57,316 | INFO     | PanDA job id: 7122778076
[2026-05-01 10:25:47] 2026-05-01 08:24:57,316 | INFO     | task id: 50017065
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | errors: (none)
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | pilot state: finished 
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | transexitcode: 0
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | exeerrorcode: 0
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | exeerrordiag: 
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | exitcode: 0
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | exitmsg: OK
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | cpuconsumptiontime: 37953 s
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | nevents: 400
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | neventsw: 0
[2026-05-01 10:25:47] 2026-05-01 08:24:57,317 | INFO     | pid: 655719
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | pgrp: 655719
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | corecount: 4
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | event service: False
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | sizes: {0: 2276499, 1: 2278328, 11: 2278328, 10458: 2307607, 10459: 2316627, 10462: 2317069}
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | --------------------------------------------------
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | 
[2026-05-01 10:25:47] 2026-05-01 08:24:57,318 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/8
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,349 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | job 7122778076 has completed (purged errors)
[2026-05-01 10:25:47] 2026-05-01 08:24:57,350 | INFO     | overall cleanup function is called
[2026-05-01 10:25:47] 2026-05-01 08:24:58,233 | WARNING  | process 655719 can no longer be monitored (due to stat problems) - aborting
[2026-05-01 10:25:47] 2026-05-01 08:24:58,359 | INFO     | --- collectZombieJob: --- 10, [655719]
[2026-05-01 10:25:47] 2026-05-01 08:24:58,359 | INFO     | zombie collector waiting for pid 655719
[2026-05-01 10:25:47] 2026-05-01 08:24:58,359 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 10:25:47] 2026-05-01 08:24:58,359 | INFO     | collected zombie processes
[2026-05-01 10:25:47] 2026-05-01 08:24:58,360 | INFO     | will attempt to kill all subprocesses of pid=655719
[2026-05-01 10:25:47] 2026-05-01 08:24:59,337 | INFO     | using path: /var/lib/boinc/var/slot20/slots/8/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 10:25:47] 2026-05-01 08:25:00,071 | INFO     | process IDs to be killed: [655719] (in reverse order)
[2026-05-01 10:25:47] 2026-05-01 08:25:00,445 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 10:25:47] 2026-05-01 08:25:00,445 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 10:25:47] 2026-05-01 08:25:00,448 | INFO     | number of running child processes to parent process 655719: 1
[2026-05-01 10:25:47] 2026-05-01 08:25:00,449 | INFO     | maximum number of monitored processes: 6
[2026-05-01 10:25:47] 2026-05-01 08:25:00,449 | INFO     | aborting job monitoring since job object (job id=7122778076) has expired
[2026-05-01 10:25:47] 2026-05-01 08:25:00,473 | INFO     | did not find any defunct processes belonging to 655719
[2026-05-01 10:25:47] 2026-05-01 08:25:00,497 | INFO     | did not find any defunct processes belonging to 655719
[2026-05-01 10:25:47] 2026-05-01 08:25:00,497 | INFO     | Ready for new job
[2026-05-01 10:25:47] 2026-05-01 08:25:00,499 | INFO     | ***************************************
[2026-05-01 10:25:47] 2026-05-01 08:25:00,499 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 10:25:47] 2026-05-01 08:25:00,499 | INFO     | ***************************************
[2026-05-01 10:25:47] 2026-05-01 08:25:00,499 | INFO     | 
[2026-05-01 10:25:47] 2026-05-01 08:25:00,508 | INFO     | architecture information:
[2026-05-01 10:25:47] 2026-05-01 08:25:00,508 | INFO     | executing command: cat /etc/os-release
[2026-05-01 10:25:47] 2026-05-01 08:25:00,536 | INFO     | cat /etc/os-release:
[2026-05-01 10:25:47] NAME="CentOS Linux"
[2026-05-01 10:25:47] VERSION="7 (Core)"
[2026-05-01 10:25:47] ID="centos"
[2026-05-01 10:25:47] ID_LIKE="rhel fedora"
[2026-05-01 10:25:47] VERSION_ID="7"
[2026-05-01 10:25:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 10:25:47] ANSI_COLOR="0;31"
[2026-05-01 10:25:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 10:25:47] HOME_URL="https://www.centos.org/"
[2026-05-01 10:25:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 10:25:47] 
[2026-05-01 10:25:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 10:25:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 10:25:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 10:25:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 10:25:47] 
[2026-05-01 10:25:47] 2026-05-01 08:25:00,536 | INFO     | ***************************************
[2026-05-01 10:25:47] 2026-05-01 08:25:01,039 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/8
[2026-05-01 10:25:47] 2026-05-01 08:25:01,065 | INFO     | sufficient remaining disk space (110730674176 B)
[2026-05-01 10:25:47] 2026-05-01 08:25:01,065 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 10:25:47] 2026-05-01 08:25:01,065 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 10:25:47] 2026-05-01 08:25:01,065 | INFO     | update_server=False
[2026-05-01 10:25:47] 2026-05-01 08:25:01,065 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 10:25:47] 2026-05-01 08:25:01,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 10:25:47] 2026-05-01 08:25:01,066 | INFO     | will abort loop
[2026-05-01 10:25:47] 2026-05-01 08:25:01,343 | INFO     | all job control threads have been joined
[2026-05-01 10:25:47] 2026-05-01 08:25:01,411 | INFO     | all payload control threads have been joined
[2026-05-01 10:25:47] 2026-05-01 08:25:01,467 | INFO     | all data control threads have been joined
[2026-05-01 10:25:47] 2026-05-01 08:25:01,907 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 10:25:47] 2026-05-01 08:25:02,071 | INFO     | [job] retrieve thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,072 | INFO     | [job] job monitor thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,141 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,349 | INFO     | [job] control thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,416 | INFO     | [payload] control thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 10:25:47] 2026-05-01 08:25:02,472 | INFO     | [data] control thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,488 | INFO     | [payload] validate_post thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 10:25:47] 2026-05-01 08:25:02,865 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:02,913 | INFO     | [job] queue monitor thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:03,323 | INFO     | [data] copytool_in thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:03,382 | INFO     | [job] validate thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:03,406 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:03,589 | INFO     | [payload] failed_post thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:04,450 | INFO     | [data] copytool_out thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:06,763 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:11,280 | INFO     | job.realtimelogging is not enabled
[2026-05-01 10:25:47] 2026-05-01 08:25:12,285 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 10:25:47] 2026-05-01 08:25:30,286 | INFO     | PID=650349 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 10:25:47] 2026-05-01 08:25:30,286 | INFO     | .. there are 29 such processes running
[2026-05-01 10:25:47] 2026-05-01 08:25:30,288 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 10:25:47] 2026-05-01 08:25:30,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 10:25:47] 2026-05-01 08:25:30,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 10:25:47] 2026-05-01 08:25:40,948 | INFO     | [monitor] cgroup control has ended
[2026-05-01 10:25:47] 2026-05-01 08:25:42,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22814200248128)>', '<ExcThread(monitor, started 22813961627392)>']
[2026-05-01 10:25:47] 2026-05-01 08:25:42,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 10:25:47] 2026-05-01 08:25:42,350 | INFO     | [monitor] control thread has ended
[2026-05-01 10:25:47] 2026-05-01 08:25:47,182 | INFO     | all workflow threads have been joined
[2026-05-01 10:25:47] 2026-05-01 08:25:47,182 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 10:25:47] 2026-05-01 08:25:47,182 | INFO     | traces error code: 0
[2026-05-01 10:25:47] 2026-05-01 08:25:47,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 10:25:47] 2026-05-01 08:25:47,328 [wrapper] ==== pilot stdout END ====
[2026-05-01 10:25:47] 2026-05-01 08:25:47,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 10:25:47] 2026-05-01 08:25:47,338 [wrapper] pilotpid: 650349
[2026-05-01 10:25:47] 2026-05-01 08:25:47,343 [wrapper] Pilot exit status: 0
[2026-05-01 10:25:47] 2026-05-01 08:25:47,362 [wrapper] pandaids: 7122778076
[2026-05-01 10:25:47] 2026-05-01 08:25:47,560 [wrapper] cleanup supervisor_pilot 1084048 650350
[2026-05-01 10:25:47] 2026-05-01 08:25:47,564 [wrapper] Test setup, not cleaning
[2026-05-01 10:25:47] 2026-05-01 08:25:47,569 [wrapper] apfmon messages muted
[2026-05-01 10:25:47] 2026-05-01 08:25:47,574 [wrapper] ==== wrapper stdout END ====
[2026-05-01 10:25:47] 2026-05-01 08:25:47,578 [wrapper] ==== wrapper stderr END ====
[2026-05-01 10:25:47]  *** Error codes and diagnostics ***
[2026-05-01 10:25:47]     "exeErrorCode": 0,
[2026-05-01 10:25:47]     "pilotErrorCode": 0,
[2026-05-01 10:25:47]  *** Listing of results directory ***
[2026-05-01 10:25:47] total 487140
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc    683926 Apr 30 15:02 pilot3.tar.gz
[2026-05-01 10:25:47] -rwx------. 1 boinc boinc     36322 Apr 30 15:06 runpilot2-wrapper.sh
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc      5631 Apr 30 15:06 queuedata.json
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc       100 May  1 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 10:25:47] -rwxr-xr-x. 1 boinc boinc      7986 May  1 07:29 run_atlas
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc       105 May  1 07:29 job.xml
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc 321046647 May  1 07:29 EVNT.50017059._000040.pool.root.1
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc      6537 May  1 07:29 init_data.xml
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc     15667 May  1 07:29 start_atlas.sh
[2026-05-01 10:25:47] drwxrwx--x. 2 boinc boinc      4096 May  1 07:29 shared
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc    697386 May  1 07:29 input.tar.gz
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc         0 May  1 07:29 boinc_lockfile
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc      2508 May  1 07:29 pandaJob.out
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc   1001806 May  1 07:30 agis_schedconf.cvmfs.json
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc   1510091 May  1 07:30 agis_ddmendpoints.agis.ALL.json
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc       442 May  1 07:30 workernode_map.json
[2026-05-01 10:25:47] drwx------. 5 boinc boinc      4096 May  1 07:30 pilot3
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc 171145127 May  1 10:24 HITS.50017065._000981.pool.root.1
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc       488 May  1 10:24 boinc_task_state.xml
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc      1040 May  1 10:24 memory_monitor_summary.json
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc    289802 May  1 10:24 log.50017065._000981.job.log.tgz.1
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc      6367 May  1 10:24 heartbeat_new.json
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc      6258 May  1 10:24 heartbeat.json
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc        95 May  1 10:25 pilot_heartbeat.json
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc        28 May  1 10:25 wrapper_checkpoint.txt
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc      8192 May  1 10:25 boinc_mmap_file
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc      4907 May  1 10:25 pilotlog.txt
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc    962057 May  1 10:25 log.50017065._000981.job.log.1
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc       357 May  1 10:25 output.list
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc       410 May  1 10:25 runtime_log
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc   1269760 May  1 10:25 result.tar.gz
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc      8828 May  1 10:25 runtime_log.err
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc       665 May  1 10:25 53b95559d034.diag
[2026-05-01 10:25:47] -rw-r--r--. 1 boinc boinc     21036 May  1 10:25 stderr.txt
[2026-05-01 10:25:47] HITS file was successfully produced:
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc 171145127 May  1 10:24 shared/HITS.pool.root.1
[2026-05-01 10:25:47]  *** Contents of shared directory: ***
[2026-05-01 10:25:47] total 482608
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc 321046647 May  1 07:29 ATLAS.root_0
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc     15667 May  1 07:29 start_atlas.sh
[2026-05-01 10:25:47] -rw-r--r--. 2 boinc boinc    697386 May  1 07:29 input.tar.gz
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc 171145127 May  1 10:24 HITS.pool.root.1
[2026-05-01 10:25:47] -rw-------. 1 boinc boinc   1269760 May  1 10:25 result.tar.gz
10:25:49 (645450): run_atlas exited; CPU time 38505.933726
10:25:49 (645450): called boinc_finish(0)

</stderr_txt>
]]>

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