Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:29:47 (3782412): wrapper (7.7.26015): starting
08:29:47 (3782412): wrapper: running run_atlas (--nthreads 11)
[2026-04-30 08:29:47] Arguments: --nthreads 11
[2026-04-30 08:29:47] Threads: 11
[2026-04-30 08:29:47] Checking for CVMFS
[2026-04-30 08:29:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 08:29:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 08:29:47] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 08:29:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 08:29:47] 2.13.3.0 13693 253249 263712 159051 1 196 22032526 40960000 4333 16776704 0 697931546 99.636 719134829 36605 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 08:29:47] CVMFS is ok
[2026-04-30 08:29:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 08:29:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 08:29:47] Further information can be found at the LHC@home message board.
[2026-04-30 08:29:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 08:29:47] Checking for apptainer binary...
[2026-04-30 08:29:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 08:29:47] Running /usr/bin/apptainer --version
[2026-04-30 08:29:47] apptainer version 1.4.5-3.el9
[2026-04-30 08:29:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 08:29:48] c6-5-37-3.aglt2.org
[2026-04-30 08:29:48] apptainer works
[2026-04-30 08:29:48] Set ATHENA_PROC_NUMBER=11
[2026-04-30 08:29:48] Set ATHENA_CORE_NUMBER=11
[2026-04-30 08:29:48] Starting ATLAS job with PandaID=7122343611
[2026-04-30 08:29:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 09:35:13]  *** The last 200 lines of the pilot log: ***
[2026-04-30 09:35:13]  filetype=log
[2026-04-30 09:35:13]  guid=1a6928d0-e187-4dc2-afe9-0061a36f8509
[2026-04-30 09:35:13]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-04-30 09:35:13]  is_altstaged=None
[2026-04-30 09:35:13]  is_tar=False
[2026-04-30 09:35:13]  lfn=log.50017082._000048.job.log.tgz.1
[2026-04-30 09:35:13]  mtime=0
[2026-04-30 09:35:13]  protocol_id=None
[2026-04-30 09:35:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-04-30 09:35:13]  replicas=None
[2026-04-30 09:35:13]  scope=mc23_13p6TeV
[2026-04-30 09:35:13]  status=None
[2026-04-30 09:35:13]  status_code=0
[2026-04-30 09:35:13]  storage_token=
[2026-04-30 09:35:13]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-7122343611/log.50017082._000048.job.log.tgz.1
[2026-04-30 09:35:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/03/log.50017082._000048.job.log.tgz.1
[2026-04-30 09:35:13]  workdir=None
[2026-04-30 09:35:13] ]
[2026-04-30 09:35:13] 2026-04-30 13:34:25,497 | INFO     | monitor loop #293: job 0:7122343611 is in state 'stageout'
[2026-04-30 09:35:13] 2026-04-30 13:34:25,506 | WARNING  | aborting job monitor tasks since payload process 3793742 is not running
[2026-04-30 09:35:13] 2026-04-30 13:34:25,506 | INFO     | transferring file log.50017082._000048.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-7122343611/log.50017082._000048.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-04-30 09:35:13] 2026-04-30 13:34:25,506 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-7122343611/log.50017082._000048.job.log.tgz.1 /tmp/boinchome/slots/4/log.50017082._000048.job
[2026-04-30 09:35:13] 2026-04-30 13:34:25,524 | INFO     | adding to output.list: log.50017082._000048.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ec/03/log.50017082._000048.job.log.tg
[2026-04-30 09:35:13] 2026-04-30 13:34:25,525 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-04-30 09:35:13] 2026-04-30 13:34:25,525 | INFO     | summary of transferred files:
[2026-04-30 09:35:13] 2026-04-30 13:34:25,525 | INFO     |  -- lfn=log.50017082._000048.job.log.tgz.1, status_code=0, status=transferred
[2026-04-30 09:35:13] 2026-04-30 13:34:25,525 | INFO     | stage-out finished correctly
[2026-04-30 09:35:13] 2026-04-30 13:34:26,039 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-04-30 09:35:13] 2026-04-30 13:34:28,008 | INFO     | monitor loop #294: job 0:7122343611 is in state 'finished'
[2026-04-30 09:35:13] 2026-04-30 13:34:28,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,097 | INFO     | job 7122343611 has state=finished
[2026-04-30 09:35:13] 2026-04-30 13:34:28,098 | INFO     | preparing for final server update for job 7122343611 in state='finished'
[2026-04-30 09:35:13] 2026-04-30 13:34:28,098 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-7122343611/jobReport.json
[2026-04-30 09:35:13] 2026-04-30 13:34:28,100 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-04-30 09:35:13] 2026-04-30 13:34:28,100 | INFO     | this job has now completed (state=finished)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,100 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,100 | INFO     | log transfer has been attempted: DONE
[2026-04-30 09:35:13] 2026-04-30 13:34:28,101 | INFO     | job 7122343611 has finished - writing final server update
[2026-04-30 09:35:13] 2026-04-30 13:34:28,101 | INFO     | total number of processed events: 400 (read)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,109 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7122343611/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,110 | INFO     | extracted standard info from prmon json
[2026-04-30 09:35:13] 2026-04-30 13:34:28,110 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 09:35:13] 2026-04-30 13:34:28,110 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 09:35:13] 2026-04-30 13:34:28,110 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | fitting pss+swap vs Time
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | sum of square deviations: 54438230.0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | sum of deviations: -626320275.4999999
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | mean x (centered): 0.0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | mean y: 2733185.6964285714
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | intersect: 2733185.6964285714
[2026-04-30 09:35:13] 2026-04-30 13:34:28,112 | INFO     | chi2: 0.03620559151579642
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | current memory leak: -11.51 B/s (using 56 data points, chi2=0.04)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | could have reported an average CPU frequency of 3132 MHz (6 samples)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | ..............................
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | . Timing measurements:
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | . get job = 0 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | . initial setup = 5 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | . payload setup = 8 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,113 | INFO     | . stage-in = 0 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,114 | INFO     | . payload execution = 3839 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,114 | INFO     | . stage-out = 0 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,114 | INFO     | . log creation = 0 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,114 | INFO     | ..............................
[2026-04-30 09:35:13] 2026-04-30 13:34:28,187 | INFO     | 
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | job summary report
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | --------------------------------------------------
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | PanDA job id: 7122343611
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | task id: 50017082
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | errors: (none)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | pilot state: finished 
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | transexitcode: 0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | exeerrorcode: 0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | exeerrordiag: 
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | exitcode: 0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,188 | INFO     | exitmsg: OK
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | cpuconsumptiontime: 37244 s
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | nevents: 400
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | neventsw: 0
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | pid: 3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | pgrp: 3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | corecount: 11
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | event service: False
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | sizes: {0: 2277044, 1: 2278873, 11: 2278873, 3852: 2313726, 3853: 2313726, 3855: 2313920}
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | --------------------------------------------------
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | 
[2026-04-30 09:35:13] 2026-04-30 13:34:28,189 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | job 7122343611 has completed (purged errors)
[2026-04-30 09:35:13] 2026-04-30 13:34:28,207 | INFO     | overall cleanup function is called
[2026-04-30 09:35:13] 2026-04-30 13:34:29,215 | INFO     | --- collectZombieJob: --- 10, [3793742]
[2026-04-30 09:35:13] 2026-04-30 13:34:29,215 | INFO     | zombie collector waiting for pid 3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:29,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 09:35:13] 2026-04-30 13:34:29,216 | INFO     | collected zombie processes
[2026-04-30 09:35:13] 2026-04-30 13:34:29,216 | INFO     | will attempt to kill all subprocesses of pid=3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:29,408 | INFO     | process IDs to be killed: [3793742] (in reverse order)
[2026-04-30 09:35:13] 2026-04-30 13:34:29,484 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 09:35:13] 2026-04-30 13:34:29,485 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 09:35:13] 2026-04-30 13:34:29,494 | INFO     | did not find any defunct processes belonging to 3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:29,502 | INFO     | did not find any defunct processes belonging to 3793742
[2026-04-30 09:35:13] 2026-04-30 13:34:29,502 | INFO     | Ready for new job
[2026-04-30 09:35:13] 2026-04-30 13:34:29,503 | INFO     | ***************************************
[2026-04-30 09:35:13] 2026-04-30 13:34:29,503 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 09:35:13] 2026-04-30 13:34:29,503 | INFO     | ***************************************
[2026-04-30 09:35:13] 2026-04-30 13:34:29,503 | INFO     | 
[2026-04-30 09:35:13] 2026-04-30 13:34:29,506 | INFO     | architecture information:
[2026-04-30 09:35:13] 2026-04-30 13:34:29,506 | INFO     | executing command: cat /etc/os-release
[2026-04-30 09:35:13] 2026-04-30 13:34:29,519 | INFO     | cat /etc/os-release:
[2026-04-30 09:35:13] NAME="CentOS Linux"
[2026-04-30 09:35:13] VERSION="7 (Core)"
[2026-04-30 09:35:13] ID="centos"
[2026-04-30 09:35:13] ID_LIKE="rhel fedora"
[2026-04-30 09:35:13] VERSION_ID="7"
[2026-04-30 09:35:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 09:35:13] ANSI_COLOR="0;31"
[2026-04-30 09:35:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 09:35:13] HOME_URL="https://www.centos.org/"
[2026-04-30 09:35:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 09:35:13] 
[2026-04-30 09:35:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 09:35:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 09:35:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 09:35:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 09:35:13] 
[2026-04-30 09:35:13] 2026-04-30 13:34:29,520 | INFO     | ***************************************
[2026-04-30 09:35:13] 2026-04-30 13:34:30,023 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-30 09:35:13] 2026-04-30 13:34:30,038 | INFO     | sufficient remaining disk space (72041365504 B)
[2026-04-30 09:35:13] 2026-04-30 13:34:30,038 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 09:35:13] 2026-04-30 13:34:30,039 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 09:35:13] 2026-04-30 13:34:30,039 | INFO     | update_server=False
[2026-04-30 09:35:13] 2026-04-30 13:34:30,039 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 09:35:13] 2026-04-30 13:34:30,039 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 09:35:13] 2026-04-30 13:34:30,431 | INFO     | all data control threads have been joined
[2026-04-30 09:35:13] 2026-04-30 13:34:30,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 09:35:13] 2026-04-30 13:34:30,512 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 09:35:13] 2026-04-30 13:34:30,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 09:35:13] 2026-04-30 13:34:30,512 | INFO     | will abort loop
[2026-04-30 09:35:13] 2026-04-30 13:34:31,044 | INFO     | [job] retrieve thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,045 | INFO     | [job] queue monitor thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,054 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,062 | INFO     | [data] copytool_in thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 09:35:13] 2026-04-30 13:34:31,289 | INFO     | all payload control threads have been joined
[2026-04-30 09:35:13] 2026-04-30 13:34:31,435 | INFO     | [data] control thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,499 | INFO     | [payload] failed_post thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,517 | INFO     | [job] job monitor thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:31,521 | INFO     | all job control threads have been joined
[2026-04-30 09:35:13] 2026-04-30 13:34:31,779 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:32,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 09:35:13] 2026-04-30 13:34:32,194 | INFO     | [job] validate thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:32,249 | INFO     | [payload] validate_post thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:32,294 | INFO     | [payload] control thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:32,513 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:32,526 | INFO     | [job] control thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:33,124 | INFO     | [data] copytool_out thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:36,124 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:34:41,001 | INFO     | job.realtimelogging is not enabled
[2026-04-30 09:35:13] 2026-04-30 13:34:42,006 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 09:35:13] 2026-04-30 13:35:00,595 | INFO     | PID=3786481 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 09:35:13] 2026-04-30 13:35:00,595 | INFO     | .. there are 5 such processes running
[2026-04-30 09:35:13] 2026-04-30 13:35:00,595 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 09:35:13] 2026-04-30 13:35:00,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 09:35:13] 2026-04-30 13:35:00,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 09:35:13] 2026-04-30 13:35:07,864 | INFO     | [monitor] cgroup control has ended
[2026-04-30 09:35:13] 2026-04-30 13:35:08,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842333153088)>', '<ExcThread(monitor, started 139841559840512)>']
[2026-04-30 09:35:13] 2026-04-30 13:35:08,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 09:35:13] 2026-04-30 13:35:08,636 | INFO     | [monitor] control thread has ended
[2026-04-30 09:35:13] 2026-04-30 13:35:13,396 | INFO     | all workflow threads have been joined
[2026-04-30 09:35:13] 2026-04-30 13:35:13,397 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 09:35:13] 2026-04-30 13:35:13,397 | INFO     | traces error code: 0
[2026-04-30 09:35:13] 2026-04-30 13:35:13,397 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 09:35:13] 2026-04-30 13:35:13,545 [wrapper] ==== pilot stdout END ====
[2026-04-30 09:35:13] 2026-04-30 13:35:13,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 09:35:13] 2026-04-30 13:35:13,549 [wrapper] pilotpid: 3786481
[2026-04-30 09:35:13] 2026-04-30 13:35:13,551 [wrapper] Pilot exit status: 0
[2026-04-30 09:35:13] 2026-04-30 13:35:13,560 [wrapper] pandaids: 7122343611
[2026-04-30 09:35:13] 2026-04-30 13:35:13,611 [wrapper] cleanup supervisor_pilot 3908654 3786482
[2026-04-30 09:35:13] 2026-04-30 13:35:13,613 [wrapper] Test setup, not cleaning
[2026-04-30 09:35:13] 2026-04-30 13:35:13,616 [wrapper] apfmon messages muted
[2026-04-30 09:35:13] 2026-04-30 13:35:13,618 [wrapper] ==== wrapper stdout END ====
[2026-04-30 09:35:13] 2026-04-30 13:35:13,620 [wrapper] ==== wrapper stderr END ====
[2026-04-30 09:35:13]  *** Error codes and diagnostics ***
[2026-04-30 09:35:13]     "exeErrorCode": 0,
[2026-04-30 09:35:13]     "pilotErrorCode": 0,
[2026-04-30 09:35:13]  *** Listing of results directory ***
[2026-04-30 09:35:13] total 499992
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 06:49 pilot3.tar.gz
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 06:50 queuedata.json
[2026-04-30 09:35:13] -rwx------. 1 boincer umatlas     36322 Apr 30 06:50 runpilot2-wrapper.sh
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas       100 Apr 30 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 09:35:13] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 08:29 run_atlas
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas       105 Apr 30 08:29 job.xml
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas 333684959 Apr 30 08:29 EVNT.50017078._000002.pool.root.1
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 08:29 start_atlas.sh
[2026-04-30 09:35:13] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 08:29 shared
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas    697396 Apr 30 08:29 input.tar.gz
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas         0 Apr 30 08:29 boinc_lockfile
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas      2517 Apr 30 08:29 pandaJob.out
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas        57 Apr 30 08:29 setup.sh.local
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas    993692 Apr 30 08:29 agis_schedconf.cvmfs.json
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas   1510841 Apr 30 08:29 agis_ddmendpoints.agis.ALL.json
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas       442 Apr 30 08:30 workernode_map.json
[2026-04-30 09:35:13] drwx------. 5 boincer umatlas      4096 Apr 30 08:30 pilot3
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas      6760 Apr 30 09:31 init_data.xml
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas 172658528 Apr 30 09:33 HITS.50017082._000048.pool.root.1
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas       487 Apr 30 09:33 boinc_task_state.xml
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas        95 Apr 30 09:34 pilot_heartbeat.json
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas      1032 Apr 30 09:34 memory_monitor_summary.json
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas    352817 Apr 30 09:34 log.50017082._000048.job.log.tgz.1
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas      6390 Apr 30 09:34 heartbeat_new.json
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas      6281 Apr 30 09:34 heartbeat.json
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 09:35 boinc_mmap_file
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas        27 Apr 30 09:35 wrapper_checkpoint.txt
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas      5080 Apr 30 09:35 pilotlog.txt
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas    403486 Apr 30 09:35 log.50017082._000048.job.log.1
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas       357 Apr 30 09:35 output.list
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas       410 Apr 30 09:35 runtime_log
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas    778240 Apr 30 09:35 result.tar.gz
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas      8971 Apr 30 09:35 runtime_log.err
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas       652 Apr 30 09:35 340d8c2241b0.diag
[2026-04-30 09:35:13] -rw-r--r--. 1 boincer umatlas     21207 Apr 30 09:35 stderr.txt
[2026-04-30 09:35:13] HITS file was successfully produced:
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas 172658528 Apr 30 09:33 shared/HITS.pool.root.1
[2026-04-30 09:35:13]  *** Contents of shared directory: ***
[2026-04-30 09:35:13] total 495944
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas 333684959 Apr 30 08:29 ATLAS.root_0
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 08:29 start_atlas.sh
[2026-04-30 09:35:13] -rw-r--r--. 2 boincer umatlas    697396 Apr 30 08:29 input.tar.gz
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas 172658528 Apr 30 09:33 HITS.pool.root.1
[2026-04-30 09:35:13] -rw-------. 1 boincer umatlas    778240 Apr 30 09:35 result.tar.gz
09:35:15 (3782412): run_atlas exited; CPU time 37310.268793
09:35:15 (3782412): called boinc_finish(0)

</stderr_txt>
]]>

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