Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:07:40 (1278007): wrapper (7.7.26015): starting
17:07:40 (1278007): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 17:07:40] Arguments: --nthreads 4
[2026-05-03 17:07:40] Threads: 4
[2026-05-03 17:07:40] Checking for CVMFS
[2026-05-03 17:07:40] No cvmfs_config command found, will try listing directly
[2026-05-03 17:07:40] CVMFS is ok
[2026-05-03 17:07:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 17:07:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 17:07:40] Further information can be found at the LHC@home message board.
[2026-05-03 17:07:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 17:07:40] Checking for apptainer binary...
[2026-05-03 17:07:40] which: no apptainer in ((null))
[2026-05-03 17:07:40] apptainer is not installed, using version from CVMFS
[2026-05-03 17:07:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 17:07:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-03 17:07:40] apptainer works
[2026-05-03 17:07:40] Set ATHENA_PROC_NUMBER=4
[2026-05-03 17:07:40] Set ATHENA_CORE_NUMBER=4
[2026-05-03 17:07:40] Starting ATLAS job with PandaID=7122776048
[2026-05-03 17:07:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 19:47:28]  *** The last 200 lines of the pilot log: ***
[2026-05-03 19:47:28] 2026-05-03 17:46:38,003 | INFO     | this job has now completed (state=finished)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,003 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,004 | INFO     | log transfer has been attempted: DONE
[2026-05-03 19:47:28] 2026-05-03 17:46:38,004 | INFO     | job 7122776048 has finished - writing final server update
[2026-05-03 19:47:28] 2026-05-03 17:46:38,005 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_74497/.job.ad'
[2026-05-03 19:47:28] 2026-05-03 17:46:38,005 | INFO     | total number of processed events: 400 (read)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,053 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7122776048/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,055 | INFO     | extracted standard info from prmon json
[2026-05-03 19:47:28] 2026-05-03 17:46:38,055 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 19:47:28] 2026-05-03 17:46:38,056 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 19:47:28] 2026-05-03 17:46:38,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 19:47:28] 2026-05-03 17:46:38,065 | INFO     | fitting pss+swap vs Time
[2026-05-03 19:47:28] 2026-05-03 17:46:38,066 | INFO     | sum of square deviations: 1177156955.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,068 | INFO     | sum of deviations: 13816846327.499996
[2026-05-03 19:47:28] 2026-05-03 17:46:38,068 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,068 | INFO     | mean y: 2299538.173076923
[2026-05-03 19:47:28] 2026-05-03 17:46:38,069 | INFO     | intersect: 2299538.173076923
[2026-05-03 19:47:28] 2026-05-03 17:46:38,069 | INFO     | chi2: 2.256854640243408
[2026-05-03 19:47:28] 2026-05-03 17:46:38,070 | INFO     | sum of square deviations: 1067554900.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,073 | INFO     | sum of deviations: 22984934443.999996
[2026-05-03 19:47:28] 2026-05-03 17:46:38,073 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,073 | INFO     | mean y: 2311935.741721854
[2026-05-03 19:47:28] 2026-05-03 17:46:38,073 | INFO     | intersect: 2311935.741721854
[2026-05-03 19:47:28] 2026-05-03 17:46:38,075 | INFO     | chi2: 1.4404158186995384
[2026-05-03 19:47:28] 2026-05-03 17:46:38,075 | INFO     | current chi2=1.4404158186995384 (change=36.17595954056724 %)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,076 | INFO     | sum of square deviations: 964976232.5
[2026-05-03 19:47:28] 2026-05-03 17:46:38,078 | INFO     | sum of deviations: 22041264535.499996
[2026-05-03 19:47:28] 2026-05-03 17:46:38,078 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,079 | INFO     | mean y: 2310532.4178082193
[2026-05-03 19:47:28] 2026-05-03 17:46:38,079 | INFO     | intersect: 2310532.4178082193
[2026-05-03 19:47:28] 2026-05-03 17:46:38,080 | INFO     | chi2: 1.4416702584017058
[2026-05-03 19:47:28] 2026-05-03 17:46:38,080 | INFO     | current chi2=1.4416702584017058 (change=-0.08708872020719592 %)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,080 | INFO     | right removable region: 145
[2026-05-03 19:47:28] 2026-05-03 17:46:38,081 | INFO     | sum of square deviations: 1067554900.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,082 | INFO     | sum of deviations: -7415094608.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | mean y: 2328609.9933774834
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | intersect: 2328609.9933774834
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | chi2: 0.8444255772025718
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | current chi2=0.8444255772025718 (change=62.58396255810707 %)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,083 | INFO     | sum of square deviations: 964976232.5
[2026-05-03 19:47:28] 2026-05-03 17:46:38,084 | INFO     | sum of deviations: -7581851040.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,084 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,084 | INFO     | mean y: 2328866.2328767125
[2026-05-03 19:47:28] 2026-05-03 17:46:38,084 | INFO     | intersect: 2328866.2328767125
[2026-05-03 19:47:28] 2026-05-03 17:46:38,084 | INFO     | chi2: 0.8445669048131252
[2026-05-03 19:47:28] 2026-05-03 17:46:38,085 | INFO     | current chi2=0.8445669048131252 (change=-0.01673653834854253 %)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,085 | INFO     | left removable region: 10
[2026-05-03 19:47:28] 2026-05-03 17:46:38,085 | INFO     | sum of square deviations: 762879420.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | sum of deviations: 1418069989.0000002
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | mean x (centered): 0.0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | mean y: 2342752.311111111
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | intersect: 2342752.311111111
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | chi2: 0.00014318278341629817
[2026-05-03 19:47:28] 2026-05-03 17:46:38,086 | INFO     | current memory leak: 1.86 B/s (using 135 data points, chi2=0.00)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | could have reported an average CPU frequency of 2699 MHz (9 samples)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | ..............................
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | . Timing measurements:
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | . get job = 0 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | . initial setup = 8 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | . payload setup = 16 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,087 | INFO     | . stage-in = 0 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,088 | INFO     | . payload execution = 9478 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,088 | INFO     | . stage-out = 0 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,088 | INFO     | . log creation = 0 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,088 | INFO     | ..............................
[2026-05-03 19:47:28] 2026-05-03 17:46:38,187 | INFO     | 
[2026-05-03 19:47:28] 2026-05-03 17:46:38,187 | INFO     | job summary report
[2026-05-03 19:47:28] 2026-05-03 17:46:38,187 | INFO     | --------------------------------------------------
[2026-05-03 19:47:28] 2026-05-03 17:46:38,187 | INFO     | PanDA job id: 7122776048
[2026-05-03 19:47:28] 2026-05-03 17:46:38,187 | INFO     | task id: 50017045
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | errors: (none)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | pilot state: finished 
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | transexitcode: 0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | exeerrorcode: 0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | exeerrordiag: 
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | exitcode: 0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | exitmsg: OK
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | cpuconsumptiontime: 34979 s
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | nevents: 400
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | neventsw: 0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,188 | INFO     | pid: 1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | pgrp: 1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | corecount: 4
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | event service: False
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | sizes: {0: 2275289, 1: 2277118, 12: 2277118, 9498: 2305875, 9499: 2314897, 9500: 2315339}
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | --------------------------------------------------
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | 
[2026-05-03 19:47:28] 2026-05-03 17:46:38,189 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-05-03 19:47:28] 2026-05-03 17:46:38,228 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,228 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,228 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,228 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,230 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,230 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,230 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 19:47:28] 2026-05-03 17:46:38,230 | INFO     | job 7122776048 has completed (purged errors)
[2026-05-03 19:47:28] 2026-05-03 17:46:38,230 | INFO     | overall cleanup function is called
[2026-05-03 19:47:28] 2026-05-03 17:46:39,239 | INFO     | --- collectZombieJob: --- 10, [1288806]
[2026-05-03 19:47:28] 2026-05-03 17:46:39,240 | INFO     | zombie collector waiting for pid 1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:39,240 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 19:47:28] 2026-05-03 17:46:39,240 | INFO     | collected zombie processes
[2026-05-03 19:47:28] 2026-05-03 17:46:39,240 | INFO     | will attempt to kill all subprocesses of pid=1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:39,941 | INFO     | process IDs to be killed: [1288806] (in reverse order)
[2026-05-03 19:47:28] 2026-05-03 17:46:40,292 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 19:47:28] 2026-05-03 17:46:40,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 19:47:28] 2026-05-03 17:46:40,329 | INFO     | did not find any defunct processes belonging to 1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:40,361 | INFO     | did not find any defunct processes belonging to 1288806
[2026-05-03 19:47:28] 2026-05-03 17:46:40,362 | INFO     | Ready for new job
[2026-05-03 19:47:28] 2026-05-03 17:46:40,364 | INFO     | ***************************************
[2026-05-03 19:47:28] 2026-05-03 17:46:40,364 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 19:47:28] 2026-05-03 17:46:40,364 | INFO     | ***************************************
[2026-05-03 19:47:28] 2026-05-03 17:46:40,364 | INFO     | 
[2026-05-03 19:47:28] 2026-05-03 17:46:40,373 | INFO     | architecture information:
[2026-05-03 19:47:28] 2026-05-03 17:46:40,373 | INFO     | executing command: cat /etc/os-release
[2026-05-03 19:47:28] 2026-05-03 17:46:40,406 | INFO     | cat /etc/os-release:
[2026-05-03 19:47:28] NAME="CentOS Linux"
[2026-05-03 19:47:28] VERSION="7 (Core)"
[2026-05-03 19:47:28] ID="centos"
[2026-05-03 19:47:28] ID_LIKE="rhel fedora"
[2026-05-03 19:47:28] VERSION_ID="7"
[2026-05-03 19:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 19:47:28] ANSI_COLOR="0;31"
[2026-05-03 19:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 19:47:28] HOME_URL="https://www.centos.org/"
[2026-05-03 19:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 19:47:28] 
[2026-05-03 19:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 19:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 19:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 19:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 19:47:28] 
[2026-05-03 19:47:28] 2026-05-03 17:46:40,406 | INFO     | ***************************************
[2026-05-03 19:47:28] 2026-05-03 17:46:40,909 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-05-03 19:47:28] 2026-05-03 17:46:40,936 | INFO     | sufficient remaining disk space (225219444736 B)
[2026-05-03 19:47:28] 2026-05-03 17:46:40,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 19:47:28] 2026-05-03 17:46:40,936 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 19:47:28] 2026-05-03 17:46:40,936 | INFO     | update_server=False
[2026-05-03 19:47:28] 2026-05-03 17:46:40,936 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 19:47:28] 2026-05-03 17:46:41,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 19:47:28] 2026-05-03 17:46:41,204 | INFO     | aborting loop
[2026-05-03 19:47:28] 2026-05-03 17:46:41,297 | INFO     | all data control threads have been joined
[2026-05-03 19:47:28] 2026-05-03 17:46:41,640 | INFO     | all job control threads have been joined
[2026-05-03 19:47:28] 2026-05-03 17:46:41,942 | INFO     | [job] retrieve thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,138 | INFO     | all payload control threads have been joined
[2026-05-03 19:47:28] 2026-05-03 17:46:42,209 | INFO     | [job] job monitor thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,277 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,302 | INFO     | [data] control thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,351 | INFO     | [payload] failed_post thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 19:47:28] 2026-05-03 17:46:42,472 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,645 | INFO     | [job] control thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:42,702 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,143 | INFO     | [payload] control thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,197 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 19:47:28] 2026-05-03 17:46:43,230 | INFO     | [job] validate thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,278 | INFO     | [data] copytool_in thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,411 | INFO     | [payload] validate_post thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,426 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:43,933 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 19:47:28] 2026-05-03 17:46:44,202 | INFO     | [job] queue monitor thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:44,430 | INFO     | [data] copytool_out thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:46:47,939 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 19:47:28] 2026-05-03 17:47:11,191 | INFO     | PID=1282349 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 19:47:28] 2026-05-03 17:47:11,191 | INFO     | .. there are 25 such processes running
[2026-05-03 19:47:28] 2026-05-03 17:47:11,195 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 19:47:28] 2026-05-03 17:47:11,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 19:47:28] 2026-05-03 17:47:11,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 19:47:28] 2026-05-03 17:47:21,626 | INFO     | [monitor] cgroup control has ended
[2026-05-03 19:47:28] 2026-05-03 17:47:22,686 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23215806011200)>', '<ExcThread(monitor, started 23215501989632)>']
[2026-05-03 19:47:28] 2026-05-03 17:47:23,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 19:47:28] 2026-05-03 17:47:23,256 | INFO     | [monitor] control thread has ended
[2026-05-03 19:47:28] 2026-05-03 17:47:27,711 | INFO     | all workflow threads have been joined
[2026-05-03 19:47:28] 2026-05-03 17:47:27,712 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 19:47:28] 2026-05-03 17:47:27,712 | INFO     | traces error code: 0
[2026-05-03 19:47:28] 2026-05-03 17:47:27,712 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 19:47:28] 2026-05-03 17:47:27,887 [wrapper] ==== pilot stdout END ====
[2026-05-03 19:47:28] 2026-05-03 17:47:27,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 19:47:28] 2026-05-03 17:47:27,894 [wrapper] pilotpid: 1282349
[2026-05-03 19:47:28] 2026-05-03 17:47:27,897 [wrapper] Pilot exit status: 0
[2026-05-03 19:47:28] 2026-05-03 17:47:27,918 [wrapper] pandaids: 7122776048
[2026-05-03 19:47:28] 2026-05-03 17:47:28,136 [wrapper] cleanup supervisor_pilot 1693566 1282350
[2026-05-03 19:47:28] 2026-05-03 17:47:28,140 [wrapper] Test setup, not cleaning
[2026-05-03 19:47:28] 2026-05-03 17:47:28,144 [wrapper] apfmon messages muted
[2026-05-03 19:47:28] 2026-05-03 17:47:28,148 [wrapper] ==== wrapper stdout END ====
[2026-05-03 19:47:28] 2026-05-03 17:47:28,152 [wrapper] ==== wrapper stderr END ====
[2026-05-03 19:47:28]  *** Error codes and diagnostics ***
[2026-05-03 19:47:28]     "exeErrorCode": 0,
[2026-05-03 19:47:28]     "pilotErrorCode": 0,
[2026-05-03 19:47:28]  *** Listing of results directory ***
[2026-05-03 19:47:28] total 477048
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc    683926 Apr 30 14:07 pilot3.tar.gz
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc      5631 Apr 30 14:09 queuedata.json
[2026-05-03 19:47:28] -rwx------. 1 boinc boinc     36322 Apr 30 14:10 runpilot2-wrapper.sh
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc       100 May  3 17:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 19:47:28] -rwxr-xr-x. 1 boinc boinc      7986 May  3 17:07 run_atlas
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc       105 May  3 17:07 job.xml
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc 312610025 May  3 17:07 EVNT.50017040._000024.pool.root.1
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc      6540 May  3 17:07 init_data.xml
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc     15667 May  3 17:07 start_atlas.sh
[2026-05-03 19:47:28] drwxrwx--x. 2 boinc boinc      4096 May  3 17:07 shared
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc    697397 May  3 17:07 input.tar.gz
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc         0 May  3 17:07 boinc_lockfile
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc      2522 May  3 17:07 pandaJob.out
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc   1003003 May  3 17:07 agis_schedconf.cvmfs.json
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc   1508687 May  3 17:07 agis_ddmendpoints.agis.ALL.json
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc       444 May  3 17:08 workernode_map.json
[2026-05-03 19:47:28] drwx------. 5 boinc boinc      4096 May  3 17:08 pilot3
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc 169372360 May  3 19:46 HITS.50017045._000598.pool.root.1
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc       487 May  3 19:46 boinc_task_state.xml
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc      1024 May  3 19:46 memory_monitor_summary.json
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc    303248 May  3 19:46 log.50017045._000598.job.log.tgz.1
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc      6362 May  3 19:46 heartbeat_new.json
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc      6253 May  3 19:46 heartbeat.json
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc      8192 May  3 19:47 boinc_mmap_file
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc        95 May  3 19:47 pilot_heartbeat.json
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc        27 May  3 19:47 wrapper_checkpoint.txt
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc      4834 May  3 19:47 pilotlog.txt
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc    883178 May  3 19:47 log.50017045._000598.job.log.1
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc       357 May  3 19:47 output.list
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc       410 May  3 19:47 runtime_log
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc   1208320 May  3 19:47 result.tar.gz
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc      8844 May  3 19:47 runtime_log.err
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc       663 May  3 19:47 46a179faa0c5.diag
[2026-05-03 19:47:28] -rw-r--r--. 1 boinc boinc     20821 May  3 19:47 stderr.txt
[2026-05-03 19:47:28] HITS file was successfully produced:
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc 169372360 May  3 19:46 shared/HITS.pool.root.1
[2026-05-03 19:47:28]  *** Contents of shared directory: ***
[2026-05-03 19:47:28] total 472576
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc 312610025 May  3 17:07 ATLAS.root_0
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc     15667 May  3 17:07 start_atlas.sh
[2026-05-03 19:47:28] -rw-r--r--. 2 boinc boinc    697397 May  3 17:07 input.tar.gz
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc 169372360 May  3 19:46 HITS.pool.root.1
[2026-05-03 19:47:28] -rw-------. 1 boinc boinc   1208320 May  3 19:47 result.tar.gz
19:47:29 (1278007): run_atlas exited; CPU time 35552.398756
19:47:29 (1278007): called boinc_finish(0)

</stderr_txt>
]]>

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