Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:03:07 (71495): wrapper (7.7.26015): starting
10:03:07 (71495): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 10:03:07] Arguments: --nthreads 8
[2026-04-30 10:03:07] Threads: 8
[2026-04-30 10:03:07] Checking for CVMFS
[2026-04-30 10:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 10:03:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 10:03:07] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 10:03:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 10:03:07] 2.13.3.0 9861 17 48100 159052 2 186 18768966 32935937 3660 16776704 0 191234 99.999 42 2100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 10:03:07] CVMFS is ok
[2026-04-30 10:03:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 10:03:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 10:03:07] Further information can be found at the LHC@home message board.
[2026-04-30 10:03:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 10:03:07] Checking for apptainer binary...
[2026-04-30 10:03:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 10:03:07] Running /usr/bin/apptainer --version
[2026-04-30 10:03:07] apptainer version 1.4.5-3.el9
[2026-04-30 10:03:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 10:03:07] c-8-17.aglt2.org
[2026-04-30 10:03:07] apptainer works
[2026-04-30 10:03:07] Set ATHENA_PROC_NUMBER=8
[2026-04-30 10:03:07] Set ATHENA_CORE_NUMBER=8
[2026-04-30 10:03:07] Starting ATLAS job with PandaID=7122775262
[2026-04-30 10:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 12:07:41]  *** The last 200 lines of the pilot log: ***
[2026-04-30 12:07:41] 2026-04-30 16:06:41,350 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 12:07:41] 2026-04-30 16:06:41,351 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 12:07:41] 2026-04-30 16:06:41,351 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 12:07:41] 2026-04-30 16:06:41,353 | INFO     | fitting pss+swap vs Time
[2026-04-30 12:07:41] 2026-04-30 16:06:41,354 | INFO     | sum of square deviations: 549294020.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,354 | INFO     | sum of deviations: 23279021055.999996
[2026-04-30 12:07:41] 2026-04-30 16:06:41,354 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,355 | INFO     | mean y: 2495664.223140496
[2026-04-30 12:07:41] 2026-04-30 16:06:41,355 | INFO     | intersect: 2495664.223140496
[2026-04-30 12:07:41] 2026-04-30 16:06:41,355 | INFO     | chi2: 1.4891596254411803
[2026-04-30 12:07:41] 2026-04-30 16:06:41,355 | INFO     | sum of square deviations: 483971865.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,356 | INFO     | sum of deviations: 22191001083.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,356 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,356 | INFO     | mean y: 2493122.879310345
[2026-04-30 12:07:41] 2026-04-30 16:06:41,356 | INFO     | intersect: 2493122.879310345
[2026-04-30 12:07:41] 2026-04-30 16:06:41,357 | INFO     | chi2: 1.4898665843884047
[2026-04-30 12:07:41] 2026-04-30 16:06:41,357 | INFO     | current chi2=1.4898665843884047 (change=-0.047473684831802046 %)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,357 | INFO     | right removable region: 115
[2026-04-30 12:07:41] 2026-04-30 16:06:41,357 | INFO     | sum of square deviations: 483971865.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,358 | INFO     | sum of deviations: 3309029790.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,358 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,358 | INFO     | mean y: 2541553.9827586208
[2026-04-30 12:07:41] 2026-04-30 16:06:41,358 | INFO     | intersect: 2541553.9827586208
[2026-04-30 12:07:41] 2026-04-30 16:06:41,359 | INFO     | chi2: 0.01401867787922427
[2026-04-30 12:07:41] 2026-04-30 16:06:41,359 | INFO     | current chi2=0.01401867787922427 (change=99.05861818708179 %)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,359 | INFO     | sum of square deviations: 424045160.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | sum of deviations: 2951237888.9999995
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | mean y: 2542356.891891892
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | intersect: 2542356.891891892
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | chi2: 0.0016351776953684829
[2026-04-30 12:07:41] 2026-04-30 16:06:41,360 | INFO     | current chi2=0.0016351776953684829 (change=88.33572103263873 %)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,361 | INFO     | sum of square deviations: 369281342.5
[2026-04-30 12:07:41] 2026-04-30 16:06:41,361 | INFO     | sum of deviations: 2172739327.5
[2026-04-30 12:07:41] 2026-04-30 16:06:41,361 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,361 | INFO     | mean y: 2544511.896226415
[2026-04-30 12:07:41] 2026-04-30 16:06:41,362 | INFO     | intersect: 2544511.896226415
[2026-04-30 12:07:41] 2026-04-30 16:06:41,362 | INFO     | chi2: 0.0010048382882084943
[2026-04-30 12:07:41] 2026-04-30 16:06:41,362 | INFO     | current chi2=0.0010048382882084943 (change=38.54867938483856 %)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,362 | INFO     | sum of square deviations: 319447850.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,363 | INFO     | sum of deviations: 1630124776.9999988
[2026-04-30 12:07:41] 2026-04-30 16:06:41,363 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,363 | INFO     | mean y: 2546172.9603960398
[2026-04-30 12:07:41] 2026-04-30 16:06:41,363 | INFO     | intersect: 2546172.9603960398
[2026-04-30 12:07:41] 2026-04-30 16:06:41,363 | INFO     | chi2: 0.000779093270265891
[2026-04-30 12:07:41] 2026-04-30 16:06:41,364 | INFO     | current chi2=0.000779093270265891 (change=22.465805751199976 %)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,364 | INFO     | left removable region: 20
[2026-04-30 12:07:41] 2026-04-30 16:06:41,364 | INFO     | sum of square deviations: 265828240.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | sum of deviations: 1477350887.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | mean x (centered): 0.0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | mean y: 2545651.8
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | intersect: 2545651.8
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | chi2: 0.0007280760908695643
[2026-04-30 12:07:41] 2026-04-30 16:06:41,365 | INFO     | current memory leak: 5.56 B/s (using 95 data points, chi2=0.00)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | could have reported an average CPU frequency of 2599 MHz (8 samples)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | ..............................
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | . Timing measurements:
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | . get job = 0 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | . initial setup = 6 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,366 | INFO     | . payload setup = 8 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,367 | INFO     | . stage-in = 0 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,367 | INFO     | . payload execution = 7371 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,367 | INFO     | . stage-out = 0 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,367 | INFO     | . log creation = 0 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,367 | INFO     | ..............................
[2026-04-30 12:07:41] 2026-04-30 16:06:41,468 | INFO     | 
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | job summary report
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | --------------------------------------------------
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | PanDA job id: 7122775262
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | task id: 50017082
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | errors: (none)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 12:07:41] 2026-04-30 16:06:41,469 | INFO     | pilot state: finished 
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | transexitcode: 0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | exeerrorcode: 0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | exeerrordiag: 
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | exitcode: 0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | exitmsg: OK
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | cpuconsumptiontime: 48989 s
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | nevents: 400
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | neventsw: 0
[2026-04-30 12:07:41] 2026-04-30 16:06:41,470 | INFO     | pid: 79643
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | pgrp: 79643
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | corecount: 8
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | event service: False
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | sizes: {0: 2276436, 1: 2278321, 12: 2278321, 7383: 2305599, 7384: 2314652, 7386: 2314652, 7387: 2314974}
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | --------------------------------------------------
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | 
[2026-04-30 12:07:41] 2026-04-30 16:06:41,471 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-30 12:07:41] 2026-04-30 16:06:41,489 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,490 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,491 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | job 7122775262 has completed (purged errors)
[2026-04-30 12:07:41] 2026-04-30 16:06:41,492 | INFO     | overall cleanup function is called
[2026-04-30 12:07:41] 2026-04-30 16:06:42,499 | INFO     | --- collectZombieJob: --- 10, [79643]
[2026-04-30 12:07:41] 2026-04-30 16:06:42,500 | INFO     | zombie collector waiting for pid 79643
[2026-04-30 12:07:41] 2026-04-30 16:06:42,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 12:07:41] 2026-04-30 16:06:42,500 | INFO     | collected zombie processes
[2026-04-30 12:07:41] 2026-04-30 16:06:42,500 | INFO     | will attempt to kill all subprocesses of pid=79643
[2026-04-30 12:07:41] 2026-04-30 16:06:42,710 | INFO     | process IDs to be killed: [79643] (in reverse order)
[2026-04-30 12:07:41] 2026-04-30 16:06:42,777 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 12:07:41] 2026-04-30 16:06:42,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 12:07:41] 2026-04-30 16:06:42,785 | INFO     | did not find any defunct processes belonging to 79643
[2026-04-30 12:07:41] 2026-04-30 16:06:42,790 | INFO     | did not find any defunct processes belonging to 79643
[2026-04-30 12:07:41] 2026-04-30 16:06:42,791 | INFO     | Ready for new job
[2026-04-30 12:07:41] 2026-04-30 16:06:42,792 | INFO     | ***************************************
[2026-04-30 12:07:41] 2026-04-30 16:06:42,792 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 12:07:41] 2026-04-30 16:06:42,792 | INFO     | ***************************************
[2026-04-30 12:07:41] 2026-04-30 16:06:42,793 | INFO     | 
[2026-04-30 12:07:41] 2026-04-30 16:06:42,794 | INFO     | architecture information:
[2026-04-30 12:07:41] 2026-04-30 16:06:42,795 | INFO     | executing command: cat /etc/os-release
[2026-04-30 12:07:41] 2026-04-30 16:06:42,806 | INFO     | cat /etc/os-release:
[2026-04-30 12:07:41] NAME="CentOS Linux"
[2026-04-30 12:07:41] VERSION="7 (Core)"
[2026-04-30 12:07:41] ID="centos"
[2026-04-30 12:07:41] ID_LIKE="rhel fedora"
[2026-04-30 12:07:41] VERSION_ID="7"
[2026-04-30 12:07:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 12:07:41] ANSI_COLOR="0;31"
[2026-04-30 12:07:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 12:07:41] HOME_URL="https://www.centos.org/"
[2026-04-30 12:07:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 12:07:41] 
[2026-04-30 12:07:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 12:07:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 12:07:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 12:07:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 12:07:41] 
[2026-04-30 12:07:41] 2026-04-30 16:06:42,806 | INFO     | ***************************************
[2026-04-30 12:07:41] 2026-04-30 16:06:43,308 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-30 12:07:41] 2026-04-30 16:06:43,321 | INFO     | sufficient remaining disk space (73612132352 B)
[2026-04-30 12:07:41] 2026-04-30 16:06:43,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 12:07:41] 2026-04-30 16:06:43,322 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 12:07:41] 2026-04-30 16:06:43,322 | INFO     | update_server=False
[2026-04-30 12:07:41] 2026-04-30 16:06:43,322 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 12:07:41] 2026-04-30 16:06:43,322 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 12:07:41] 2026-04-30 16:06:43,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 12:07:41] 2026-04-30 16:06:43,323 | INFO     | aborting loop
[2026-04-30 12:07:41] 2026-04-30 16:06:43,359 | INFO     | all payload control threads have been joined
[2026-04-30 12:07:41] 2026-04-30 16:06:43,578 | INFO     | all data control threads have been joined
[2026-04-30 12:07:41] 2026-04-30 16:06:44,194 | INFO     | all job control threads have been joined
[2026-04-30 12:07:41] 2026-04-30 16:06:44,327 | INFO     | [job] retrieve thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,328 | INFO     | [job] queue monitor thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,329 | INFO     | [job] job monitor thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,364 | INFO     | [payload] control thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,554 | INFO     | [job] validate thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,583 | INFO     | [data] control thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:44,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 12:07:41] 2026-04-30 16:06:44,947 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,003 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,199 | INFO     | [job] control thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,314 | INFO     | [payload] failed_post thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,511 | INFO     | [data] copytool_in thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,577 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:45,662 | INFO     | [payload] validate_post thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:46,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 12:07:41] 2026-04-30 16:06:46,638 | INFO     | [data] copytool_out thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:50,355 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:06:54,081 | INFO     | job.realtimelogging is not enabled
[2026-04-30 12:07:41] 2026-04-30 16:06:55,087 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 12:07:41] 2026-04-30 16:07:14,154 | INFO     | PID=75286 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 12:07:41] 2026-04-30 16:07:14,154 | INFO     | .. there are 5 such processes running
[2026-04-30 12:07:41] 2026-04-30 16:07:14,154 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 12:07:41] 2026-04-30 16:07:14,154 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 12:07:41] 2026-04-30 16:07:14,154 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 12:07:41] 2026-04-30 16:07:34,504 | INFO     | [monitor] cgroup control has ended
[2026-04-30 12:07:41] 2026-04-30 16:07:35,850 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140003947079488)>', '<ExcThread(monitor, started 140003518707456)>']
[2026-04-30 12:07:41] 2026-04-30 16:07:36,259 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 12:07:41] 2026-04-30 16:07:36,260 | INFO     | [monitor] control thread has ended
[2026-04-30 12:07:41] 2026-04-30 16:07:40,862 | INFO     | all workflow threads have been joined
[2026-04-30 12:07:41] 2026-04-30 16:07:40,863 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 12:07:41] 2026-04-30 16:07:40,863 | INFO     | traces error code: 0
[2026-04-30 12:07:41] 2026-04-30 16:07:40,863 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 12:07:41] 2026-04-30 16:07:40,970 [wrapper] ==== pilot stdout END ====
[2026-04-30 12:07:41] 2026-04-30 16:07:40,973 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 12:07:41] 2026-04-30 16:07:40,975 [wrapper] pilotpid: 75286
[2026-04-30 12:07:41] 2026-04-30 16:07:40,977 [wrapper] Pilot exit status: 0
[2026-04-30 12:07:41] 2026-04-30 16:07:40,986 [wrapper] pandaids: 7122775262
[2026-04-30 12:07:41] 2026-04-30 16:07:41,033 [wrapper] cleanup supervisor_pilot  282403 75287
[2026-04-30 12:07:41] 2026-04-30 16:07:41,036 [wrapper] Test setup, not cleaning
[2026-04-30 12:07:41] 2026-04-30 16:07:41,038 [wrapper] apfmon messages muted
[2026-04-30 12:07:41] 2026-04-30 16:07:41,040 [wrapper] ==== wrapper stdout END ====
[2026-04-30 12:07:41] 2026-04-30 16:07:41,042 [wrapper] ==== wrapper stderr END ====
[2026-04-30 12:07:41]  *** Error codes and diagnostics ***
[2026-04-30 12:07:41]     "exeErrorCode": 0,
[2026-04-30 12:07:41]     "pilotErrorCode": 0,
[2026-04-30 12:07:41]  *** Listing of results directory ***
[2026-04-30 12:07:41] total 498760
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 08:07 pilot3.tar.gz
[2026-04-30 12:07:41] -rwx------. 1 boincer umatlas     36322 Apr 30 08:07 runpilot2-wrapper.sh
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 08:07 queuedata.json
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas       100 Apr 30 10:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 12:07:41] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 10:03 run_atlas
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas       105 Apr 30 10:03 job.xml
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas 328267052 Apr 30 10:03 EVNT.50017078._000013.pool.root.1
[2026-04-30 12:07:41] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 10:03 shared
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas    697394 Apr 30 10:03 input.tar.gz
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 10:03 start_atlas.sh
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas         0 Apr 30 10:03 boinc_lockfile
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas      2516 Apr 30 10:03 pandaJob.out
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas        57 Apr 30 10:03 setup.sh.local
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas    993700 Apr 30 10:03 agis_schedconf.cvmfs.json
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas   1510091 Apr 30 10:03 agis_ddmendpoints.agis.ALL.json
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas       433 Apr 30 10:03 workernode_map.json
[2026-04-30 12:07:41] drwx------. 5 boincer umatlas      4096 Apr 30 10:03 pilot3
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas      6573 Apr 30 12:03 init_data.xml
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas       487 Apr 30 12:06 boinc_task_state.xml
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas 176277385 Apr 30 12:06 HITS.50017082._000201.pool.root.1
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas        95 Apr 30 12:06 pilot_heartbeat.json
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas      1033 Apr 30 12:06 memory_monitor_summary.json
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas    316853 Apr 30 12:06 log.50017082._000201.job.log.tgz.1
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas      6375 Apr 30 12:06 heartbeat_new.json
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas      6266 Apr 30 12:06 heartbeat.json
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 12:07 boinc_mmap_file
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas        27 Apr 30 12:07 wrapper_checkpoint.txt
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas      4892 Apr 30 12:07 pilotlog.txt
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas    707155 Apr 30 12:07 log.50017082._000201.job.log.1
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas       357 Apr 30 12:07 output.list
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas       410 Apr 30 12:07 runtime_log
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas   1044480 Apr 30 12:07 result.tar.gz
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas      8954 Apr 30 12:07 runtime_log.err
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas       650 Apr 30 12:07 45fa4433c90b.diag
[2026-04-30 12:07:41] -rw-r--r--. 1 boincer umatlas     20739 Apr 30 12:07 stderr.txt
[2026-04-30 12:07:41] HITS file was successfully produced:
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas 176277385 Apr 30 12:06 shared/HITS.pool.root.1
[2026-04-30 12:07:41]  *** Contents of shared directory: ***
[2026-04-30 12:07:41] total 494452
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas 328267052 Apr 30 10:03 ATLAS.root_0
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas    697394 Apr 30 10:03 input.tar.gz
[2026-04-30 12:07:41] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 10:03 start_atlas.sh
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas 176277385 Apr 30 12:06 HITS.pool.root.1
[2026-04-30 12:07:41] -rw-------. 1 boincer umatlas   1044480 Apr 30 12:07 result.tar.gz
12:07:42 (71495): run_atlas exited; CPU time 49162.507333
12:07:42 (71495): called boinc_finish(0)

</stderr_txt>
]]>

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