Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:28:27 (663493): wrapper (7.7.26015): starting
06:28:27 (663493): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 06:28:27] Arguments: --nthreads 4
[2026-05-01 06:28:27] Threads: 4
[2026-05-01 06:28:27] Checking for CVMFS
[2026-05-01 06:28:27] No cvmfs_config command found, will try listing directly
[2026-05-01 06:28:27] CVMFS is ok
[2026-05-01 06:28:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 06:28:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 06:28:27] Further information can be found at the LHC@home message board.
[2026-05-01 06:28:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 06:28:27] Checking for apptainer binary...
[2026-05-01 06:28:27] which: no apptainer in ((null))
[2026-05-01 06:28:27] apptainer is not installed, using version from CVMFS
[2026-05-01 06:28:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 06:28:28] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/11/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-05-01 06:28:28] apptainer works
[2026-05-01 06:28:28] Set ATHENA_PROC_NUMBER=4
[2026-05-01 06:28:28] Set ATHENA_CORE_NUMBER=4
[2026-05-01 06:28:28] Starting ATLAS job with PandaID=7119127496
[2026-05-01 06:28:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 09:27:28]  *** The last 200 lines of the pilot log: ***
[2026-05-01 09:27:28] 2026-05-01 07:26:42,659 | INFO     | monitor loop #734: job 0:7119127496 is in state 'finished'
[2026-05-01 09:27:28] 2026-05-01 07:26:42,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 09:27:28] 2026-05-01 07:26:42,745 | INFO     | job 7119127496 has state=finished
[2026-05-01 09:27:28] 2026-05-01 07:26:42,745 | INFO     | preparing for final server update for job 7119127496 in state='finished'
[2026-05-01 09:27:28] 2026-05-01 07:26:43,401 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,402 | INFO     | reading metadata from: /var/lib/boinc/var/slot28/slots/11/PanDA_Pilot-7119127496/jobReport.json
[2026-05-01 09:27:28] 2026-05-01 07:26:43,404 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot28/slots/11/workernode_map.json
[2026-05-01 09:27:28] 2026-05-01 07:26:43,405 | INFO     | this job has now completed (state=finished)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,405 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,405 | INFO     | log transfer has been attempted: DONE
[2026-05-01 09:27:28] 2026-05-01 07:26:43,405 | INFO     | job 7119127496 has finished - writing final server update
[2026-05-01 09:27:28] 2026-05-01 07:26:43,405 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1763392/.job.ad'
[2026-05-01 09:27:28] 2026-05-01 07:26:43,406 | INFO     | total number of processed events: 400 (read)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,431 | INFO     | using path: /var/lib/boinc/var/slot28/slots/11/PanDA_Pilot-7119127496/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,431 | INFO     | extracted standard info from prmon json
[2026-05-01 09:27:28] 2026-05-01 07:26:43,431 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 09:27:28] 2026-05-01 07:26:43,432 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 09:27:28] 2026-05-01 07:26:43,432 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 09:27:28] 2026-05-01 07:26:43,435 | INFO     | fitting pss+swap vs Time
[2026-05-01 09:27:28] 2026-05-01 07:26:43,435 | INFO     | sum of square deviations: 1633472487.5
[2026-05-01 09:27:28] 2026-05-01 07:26:43,436 | INFO     | sum of deviations: 4959788823.4999895
[2026-05-01 09:27:28] 2026-05-01 07:26:43,437 | INFO     | mean x (centered): 0.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,437 | INFO     | mean y: 2334029.7988505745
[2026-05-01 09:27:28] 2026-05-01 07:26:43,437 | INFO     | intersect: 2334029.7988505745
[2026-05-01 09:27:28] 2026-05-01 07:26:43,437 | INFO     | chi2: 1.4475979172547426
[2026-05-01 09:27:28] 2026-05-01 07:26:43,437 | INFO     | sum of square deviations: 1496660620.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,438 | INFO     | sum of deviations: 4910773340.999999
[2026-05-01 09:27:28] 2026-05-01 07:26:43,438 | INFO     | mean x (centered): 0.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,439 | INFO     | mean y: 2333975.147928994
[2026-05-01 09:27:28] 2026-05-01 07:26:43,439 | INFO     | intersect: 2333975.147928994
[2026-05-01 09:27:28] 2026-05-01 07:26:43,439 | INFO     | chi2: 1.4484157898384824
[2026-05-01 09:27:28] 2026-05-01 07:26:43,439 | INFO     | current chi2=1.4484157898384824 (change=-0.05649860185560422 %)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,439 | INFO     | right removable region: 168
[2026-05-01 09:27:28] 2026-05-01 07:26:43,440 | INFO     | sum of square deviations: 1496660620.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,440 | INFO     | sum of deviations: -17743414589.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | mean x (centered): 0.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | mean y: 2358951.579881657
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | intersect: 2358951.579881657
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | chi2: 0.036751113251522194
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | current chi2=0.036751113251522194 (change=97.46123472454163 %)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,441 | INFO     | sum of square deviations: 1367709365.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,442 | INFO     | sum of deviations: -14978846795.5
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | mean x (centered): 0.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | mean y: 2355674.8353658537
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | intersect: 2355674.8353658537
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | chi2: 0.0343349165943037
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | current chi2=0.0343349165943037 (change=6.574485623557052 %)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,443 | INFO     | left removable region: 10
[2026-05-01 09:27:28] 2026-05-01 07:26:43,444 | INFO     | sum of square deviations: 1223016419.5
[2026-05-01 09:27:28] 2026-05-01 07:26:43,444 | INFO     | sum of deviations: -14384674160.500002
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | mean x (centered): 0.0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | mean y: 2356426.6518987343
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | intersect: 2356426.6518987343
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | chi2: 0.032983298120615005
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | current memory leak: -11.76 B/s (using 158 data points, chi2=0.03)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,445 | INFO     | could have reported an average CPU frequency of 2678 MHz (9 samples)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | ..............................
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . Timing measurements:
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . get job = 0 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . initial setup = 13 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . payload setup = 20 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . stage-in = 0 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . payload execution = 10614 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . stage-out = 0 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | . log creation = 0 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,446 | INFO     | ..............................
[2026-05-01 09:27:28] 2026-05-01 07:26:43,543 | INFO     | 
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | job summary report
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | --------------------------------------------------
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | PanDA job id: 7119127496
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | task id: 49263208
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | errors: (none)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | pilot state: finished 
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | transexitcode: 0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | exeerrorcode: 0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | exeerrordiag: 
[2026-05-01 09:27:28] 2026-05-01 07:26:43,544 | INFO     | exitcode: 0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | exitmsg: OK
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | cpuconsumptiontime: 40354 s
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | nevents: 400
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | neventsw: 0
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | pid: 678195
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | pgrp: 678195
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | corecount: 4
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | event service: False
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | sizes: {0: 2275921, 1: 2278419, 12: 2278419, 10639: 2307926, 10640: 2316948, 10643: 2317004, 10646: 2317390}
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | --------------------------------------------------
[2026-05-01 09:27:28] 2026-05-01 07:26:43,545 | INFO     | 
[2026-05-01 09:27:28] 2026-05-01 07:26:43,546 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/11
[2026-05-01 09:27:28] 2026-05-01 07:26:43,582 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,583 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,584 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 09:27:28] 2026-05-01 07:26:43,585 | INFO     | job 7119127496 has completed (purged errors)
[2026-05-01 09:27:28] 2026-05-01 07:26:43,585 | INFO     | overall cleanup function is called
[2026-05-01 09:27:28] 2026-05-01 07:26:44,594 | INFO     | --- collectZombieJob: --- 10, [678195]
[2026-05-01 09:27:28] 2026-05-01 07:26:44,594 | INFO     | zombie collector waiting for pid 678195
[2026-05-01 09:27:28] 2026-05-01 07:26:44,594 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 09:27:28] 2026-05-01 07:26:44,595 | INFO     | collected zombie processes
[2026-05-01 09:27:28] 2026-05-01 07:26:44,595 | INFO     | will attempt to kill all subprocesses of pid=678195
[2026-05-01 09:27:28] 2026-05-01 07:26:45,226 | INFO     | process IDs to be killed: [678195] (in reverse order)
[2026-05-01 09:27:28] 2026-05-01 07:26:45,581 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 09:27:28] 2026-05-01 07:26:45,581 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 09:27:28] 2026-05-01 07:26:45,612 | INFO     | did not find any defunct processes belonging to 678195
[2026-05-01 09:27:28] 2026-05-01 07:26:45,635 | INFO     | did not find any defunct processes belonging to 678195
[2026-05-01 09:27:28] 2026-05-01 07:26:45,635 | INFO     | Ready for new job
[2026-05-01 09:27:28] 2026-05-01 07:26:45,637 | INFO     | ***************************************
[2026-05-01 09:27:28] 2026-05-01 07:26:45,638 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 09:27:28] 2026-05-01 07:26:45,638 | INFO     | ***************************************
[2026-05-01 09:27:28] 2026-05-01 07:26:45,638 | INFO     | 
[2026-05-01 09:27:28] 2026-05-01 07:26:45,646 | INFO     | architecture information:
[2026-05-01 09:27:28] 2026-05-01 07:26:45,647 | INFO     | executing command: cat /etc/os-release
[2026-05-01 09:27:28] 2026-05-01 07:26:45,670 | INFO     | cat /etc/os-release:
[2026-05-01 09:27:28] NAME="CentOS Linux"
[2026-05-01 09:27:28] VERSION="7 (Core)"
[2026-05-01 09:27:28] ID="centos"
[2026-05-01 09:27:28] ID_LIKE="rhel fedora"
[2026-05-01 09:27:28] VERSION_ID="7"
[2026-05-01 09:27:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 09:27:28] ANSI_COLOR="0;31"
[2026-05-01 09:27:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 09:27:28] HOME_URL="https://www.centos.org/"
[2026-05-01 09:27:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 09:27:28] 
[2026-05-01 09:27:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 09:27:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 09:27:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 09:27:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 09:27:28] 
[2026-05-01 09:27:28] 2026-05-01 07:26:45,671 | INFO     | ***************************************
[2026-05-01 09:27:28] 2026-05-01 07:26:46,173 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/11
[2026-05-01 09:27:28] 2026-05-01 07:26:46,210 | INFO     | sufficient remaining disk space (106645422080 B)
[2026-05-01 09:27:28] 2026-05-01 07:26:46,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 09:27:28] 2026-05-01 07:26:46,211 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 09:27:28] 2026-05-01 07:26:46,211 | INFO     | update_server=False
[2026-05-01 09:27:28] 2026-05-01 07:26:46,211 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 09:27:28] 2026-05-01 07:26:46,211 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:27:28] 2026-05-01 07:26:46,212 | INFO     | aborting loop
[2026-05-01 09:27:28] 2026-05-01 07:26:46,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 09:27:28] 2026-05-01 07:26:46,519 | INFO     | all data control threads have been joined
[2026-05-01 09:27:28] 2026-05-01 07:26:46,821 | INFO     | all payload control threads have been joined
[2026-05-01 09:27:28] 2026-05-01 07:26:47,216 | INFO     | [job] retrieve thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,217 | INFO     | [job] job monitor thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,291 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,301 | INFO     | all job control threads have been joined
[2026-05-01 09:27:28] 2026-05-01 07:26:47,410 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 09:27:28] 2026-05-01 07:26:47,470 | INFO     | [data] copytool_in thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,525 | INFO     | [data] control thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,826 | INFO     | [payload] control thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,946 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:47,999 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,088 | INFO     | [payload] validate_post thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,178 | INFO     | [payload] failed_post thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,303 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,306 | INFO     | [job] control thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,365 | INFO     | [job] validate thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:48,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:27:28] 2026-05-01 07:26:49,411 | INFO     | [data] copytool_out thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:49,561 | INFO     | [job] queue monitor thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:26:50,218 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 09:27:28] 2026-05-01 07:27:16,070 | INFO     | PID=672762 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 09:27:28] 2026-05-01 07:27:16,070 | INFO     | .. there are 29 such processes running
[2026-05-01 09:27:28] 2026-05-01 07:27:16,072 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 09:27:28] 2026-05-01 07:27:16,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 09:27:28] 2026-05-01 07:27:16,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 09:27:28] 2026-05-01 07:27:22,836 | INFO     | [monitor] cgroup control has ended
[2026-05-01 09:27:28] 2026-05-01 07:27:23,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22812031678272)>', '<ExcThread(monitor, started 22811712157440)>']
[2026-05-01 09:27:28] 2026-05-01 07:27:24,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 09:27:28] 2026-05-01 07:27:24,113 | INFO     | [monitor] control thread has ended
[2026-05-01 09:27:28] 2026-05-01 07:27:28,226 | INFO     | all workflow threads have been joined
[2026-05-01 09:27:28] 2026-05-01 07:27:28,226 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 09:27:28] 2026-05-01 07:27:28,226 | INFO     | traces error code: 0
[2026-05-01 09:27:28] 2026-05-01 07:27:28,227 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 09:27:28] 2026-05-01 07:27:28,386 [wrapper] ==== pilot stdout END ====
[2026-05-01 09:27:28] 2026-05-01 07:27:28,390 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 09:27:28] 2026-05-01 07:27:28,394 [wrapper] pilotpid: 672762
[2026-05-01 09:27:28] 2026-05-01 07:27:28,399 [wrapper] Pilot exit status: 0
[2026-05-01 09:27:28] 2026-05-01 07:27:28,417 [wrapper] pandaids: 7119127496
[2026-05-01 09:27:28] 2026-05-01 07:27:28,611 [wrapper] cleanup supervisor_pilot 1081062 672763
[2026-05-01 09:27:28] 2026-05-01 07:27:28,615 [wrapper] Test setup, not cleaning
[2026-05-01 09:27:28] 2026-05-01 07:27:28,619 [wrapper] apfmon messages muted
[2026-05-01 09:27:28] 2026-05-01 07:27:28,623 [wrapper] ==== wrapper stdout END ====
[2026-05-01 09:27:28] 2026-05-01 07:27:28,627 [wrapper] ==== wrapper stderr END ====
[2026-05-01 09:27:28]  *** Error codes and diagnostics ***
[2026-05-01 09:27:28]     "exeErrorCode": 0,
[2026-05-01 09:27:28]     "pilotErrorCode": 0,
[2026-05-01 09:27:28]  *** Listing of results directory ***
[2026-05-01 09:27:28] total 416344
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc    683926 Apr 30 13:26 pilot3.tar.gz
[2026-05-01 09:27:28] -rwx------. 1 boinc boinc     36322 Apr 30 13:54 runpilot2-wrapper.sh
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc      5631 Apr 30 13:54 queuedata.json
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc       100 May  1 06:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 09:27:28] -rwxr-xr-x. 1 boinc boinc      7986 May  1 06:28 run_atlas
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc       105 May  1 06:28 job.xml
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc 222601087 May  1 06:28 EVNT.49263206._000147.pool.root.1
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc      6536 May  1 06:28 init_data.xml
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc     15667 May  1 06:28 start_atlas.sh
[2026-05-01 09:27:28] drwxrwx--x. 2 boinc boinc      4096 May  1 06:28 shared
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc    697421 May  1 06:28 input.tar.gz
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc         0 May  1 06:28 boinc_lockfile
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc      2573 May  1 06:28 pandaJob.out
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc   1001814 May  1 06:28 agis_schedconf.cvmfs.json
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc   1510091 May  1 06:28 agis_ddmendpoints.agis.ALL.json
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc       442 May  1 06:29 workernode_map.json
[2026-05-01 09:27:28] drwx------. 5 boinc boinc      4096 May  1 06:29 pilot3
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc 197033364 May  1 09:26 HITS.49263208._041292.pool.root.1
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc       488 May  1 09:26 boinc_task_state.xml
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc      1029 May  1 09:26 memory_monitor_summary.json
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc    291665 May  1 09:26 log.49263208._041292.job.log.tgz.1
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc      6380 May  1 09:26 heartbeat_new.json
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc      6271 May  1 09:26 heartbeat.json
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc        28 May  1 09:27 wrapper_checkpoint.txt
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc      8192 May  1 09:27 boinc_mmap_file
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc        95 May  1 09:27 pilot_heartbeat.json
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc      4833 May  1 09:27 pilotlog.txt
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc    990927 May  1 09:27 log.49263208._041292.job.log.1
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc       357 May  1 09:27 output.list
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc       410 May  1 09:27 runtime_log
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc   1300480 May  1 09:27 result.tar.gz
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc      8845 May  1 09:27 runtime_log.err
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc       665 May  1 09:27 42de9c8ea7ec.diag
[2026-05-01 09:27:28] -rw-r--r--. 1 boinc boinc     21092 May  1 09:27 stderr.txt
[2026-05-01 09:27:28] HITS file was successfully produced:
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc 197033364 May  1 09:26 shared/HITS.pool.root.1
[2026-05-01 09:27:28]  *** Contents of shared directory: ***
[2026-05-01 09:27:28] total 411780
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc 222601087 May  1 06:28 ATLAS.root_0
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc     15667 May  1 06:28 start_atlas.sh
[2026-05-01 09:27:28] -rw-r--r--. 2 boinc boinc    697421 May  1 06:28 input.tar.gz
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc 197033364 May  1 09:26 HITS.pool.root.1
[2026-05-01 09:27:28] -rw-------. 1 boinc boinc   1300480 May  1 09:27 result.tar.gz
09:27:30 (663493): run_atlas exited; CPU time 40947.712472
09:27:30 (663493): called boinc_finish(0)

</stderr_txt>
]]>

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