Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:01:11 (17050): wrapper (7.7.26015): starting
22:01:11 (17050): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 22:01:11] Arguments: --nthreads 8
[2026-04-30 22:01:11] Threads: 8
[2026-04-30 22:01:11] Checking for CVMFS
[2026-04-30 22:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 22:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 22:01:14] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 22:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 22:01:15] 2.11.2.0 6411 21776 96256 159063 3 54 20151507 25165824 96 130560 0 8688244 99.860 3795671 6201 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 22:01:15] CVMFS is ok
[2026-04-30 22:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 22:01:15] Checking for apptainer binary...
[2026-04-30 22:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 22:01:15] Running /usr/bin/apptainer --version
[2026-04-30 22:01:15] apptainer version 1.3.2-1.el7
[2026-04-30 22:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 22:01:31] cg-vwn379.simple-grid.lan
[2026-04-30 22:01:31] apptainer works
[2026-04-30 22:01:31] Set ATHENA_PROC_NUMBER=8
[2026-04-30 22:01:31] Set ATHENA_CORE_NUMBER=8
[2026-04-30 22:01:31] Starting ATLAS job with PandaID=7122042405
[2026-04-30 22:01:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 05:30:51]  *** The last 200 lines of the pilot log: ***
[2026-05-01 05:30:51] 2026-05-01 03:30:05,149 | INFO     | log transfer has been attempted: DONE
[2026-05-01 05:30:51] 2026-05-01 03:30:05,149 | INFO     | job 7122042405 has finished - writing final server update
[2026-05-01 05:30:51] 2026-05-01 03:30:05,149 | INFO     | total number of processed events: 400 (read)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,152 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7122042405/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,152 | INFO     | extracted standard info from prmon json
[2026-05-01 05:30:51] 2026-05-01 03:30:05,152 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 05:30:51] 2026-05-01 03:30:05,153 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 05:30:51] 2026-05-01 03:30:05,153 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 05:30:51] 2026-05-01 03:30:05,161 | INFO     | fitting pss+swap vs Time
[2026-05-01 05:30:51] 2026-05-01 03:30:05,162 | INFO     | sum of square deviations: 24653662247.5
[2026-05-01 05:30:51] 2026-05-01 03:30:05,179 | INFO     | sum of deviations: 153002695052.49994
[2026-05-01 05:30:51] 2026-05-01 03:30:05,179 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,180 | INFO     | mean y: 2463527.3139534886
[2026-05-01 05:30:51] 2026-05-01 03:30:05,180 | INFO     | intersect: 2463527.3139534886
[2026-05-01 05:30:51] 2026-05-01 03:30:05,181 | INFO     | chi2: 10.868312687194123
[2026-05-01 05:30:51] 2026-05-01 03:30:05,181 | INFO     | sum of square deviations: 23803609100.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,187 | INFO     | sum of deviations: 210300728790.99988
[2026-05-01 05:30:51] 2026-05-01 03:30:05,187 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,187 | INFO     | mean y: 2473732.6047058823
[2026-05-01 05:30:51] 2026-05-01 03:30:05,188 | INFO     | intersect: 2473732.6047058823
[2026-05-01 05:30:51] 2026-05-01 03:30:05,188 | INFO     | chi2: 9.318953159196596
[2026-05-01 05:30:51] 2026-05-01 03:30:05,188 | INFO     | current chi2=9.318953159196596 (change=14.25575038729886 %)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,188 | INFO     | right removable region: 424
[2026-05-01 05:30:51] 2026-05-01 03:30:05,189 | INFO     | sum of square deviations: 23803609100.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,195 | INFO     | sum of deviations: -4537924748.999996
[2026-05-01 05:30:51] 2026-05-01 03:30:05,195 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,195 | INFO     | mean y: 2491785.44
[2026-05-01 05:30:51] 2026-05-01 03:30:05,195 | INFO     | intersect: 2491785.44
[2026-05-01 05:30:51] 2026-05-01 03:30:05,196 | INFO     | chi2: 5.615053170479739
[2026-05-01 05:30:51] 2026-05-01 03:30:05,196 | INFO     | current chi2=5.615053170479739 (change=48.33555739433386 %)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,197 | INFO     | sum of square deviations: 22973323765.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,203 | INFO     | sum of deviations: -130220752260.5
[2026-05-01 05:30:51] 2026-05-01 03:30:05,203 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,203 | INFO     | mean y: 2514855.373809524
[2026-05-01 05:30:51] 2026-05-01 03:30:05,203 | INFO     | intersect: 2514855.373809524
[2026-05-01 05:30:51] 2026-05-01 03:30:05,204 | INFO     | chi2: 2.4186991373781406
[2026-05-01 05:30:51] 2026-05-01 03:30:05,204 | INFO     | current chi2=2.4186991373781406 (change=56.92473314243806 %)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,205 | INFO     | sum of square deviations: 22162573680.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,210 | INFO     | sum of deviations: -163888224138.99997
[2026-05-01 05:30:51] 2026-05-01 03:30:05,211 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,211 | INFO     | mean y: 2521154.327710843
[2026-05-01 05:30:51] 2026-05-01 03:30:05,211 | INFO     | intersect: 2521154.327710843
[2026-05-01 05:30:51] 2026-05-01 03:30:05,212 | INFO     | chi2: 1.9919355475164706
[2026-05-01 05:30:51] 2026-05-01 03:30:05,212 | INFO     | current chi2=1.9919355475164706 (change=17.644343741085542 %)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,212 | INFO     | left removable region: 15
[2026-05-01 05:30:51] 2026-05-01 03:30:05,213 | INFO     | sum of square deviations: 21215132660.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,218 | INFO     | sum of deviations: -104677552694.00005
[2026-05-01 05:30:51] 2026-05-01 03:30:05,218 | INFO     | mean x (centered): 0.0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,218 | INFO     | mean y: 2532484.6039119805
[2026-05-01 05:30:51] 2026-05-01 03:30:05,218 | INFO     | intersect: 2532484.6039119805
[2026-05-01 05:30:51] 2026-05-01 03:30:05,219 | INFO     | chi2: 0.30564841162167583
[2026-05-01 05:30:51] 2026-05-01 03:30:05,219 | INFO     | current memory leak: -4.93 B/s (using 409 data points, chi2=0.31)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,220 | INFO     | could have reported an average CPU frequency of 1999 MHz (18 samples)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,220 | INFO     | ..............................
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . Timing measurements:
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . get job = 0 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . initial setup = 123 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . payload setup = 208 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . stage-in = 0 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . payload execution = 26302 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . stage-out = 6 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | . log creation = 1 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,221 | INFO     | ..............................
[2026-05-01 05:30:51] 2026-05-01 03:30:05,346 | INFO     | 
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | job summary report
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | --------------------------------------------------
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | PanDA job id: 7122042405
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | task id: 50017283
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | errors: (none)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | pilot state: finished 
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | transexitcode: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,347 | INFO     | exeerrorcode: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | exeerrordiag: 
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | exitcode: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | exitmsg: OK
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | cpuconsumptiontime: 101041 s
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | nevents: 400
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | neventsw: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | pid: 25473
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | pgrp: 25473
[2026-05-01 05:30:51] 2026-05-01 03:30:05,348 | INFO     | corecount: 8
[2026-05-01 05:30:51] 2026-05-01 03:30:05,349 | INFO     | event service: False
[2026-05-01 05:30:51] 2026-05-01 03:30:05,349 | INFO     | sizes: {0: 2276523, 1: 2276924, 2: 2278380, 26514: 2314694, 26522: 2323692, 26524: 2323748, 26527: 2324070}
[2026-05-01 05:30:51] 2026-05-01 03:30:05,349 | INFO     | --------------------------------------------------
[2026-05-01 05:30:51] 2026-05-01 03:30:05,349 | INFO     | 
[2026-05-01 05:30:51] 2026-05-01 03:30:05,349 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | job 7122042405 has completed (purged errors)
[2026-05-01 05:30:51] 2026-05-01 03:30:05,835 | INFO     | overall cleanup function is called
[2026-05-01 05:30:51] 2026-05-01 03:30:06,844 | INFO     | --- collectZombieJob: --- 10, [25473]
[2026-05-01 05:30:51] 2026-05-01 03:30:06,845 | INFO     | zombie collector waiting for pid 25473
[2026-05-01 05:30:51] 2026-05-01 03:30:06,845 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 05:30:51] 2026-05-01 03:30:06,845 | INFO     | collected zombie processes
[2026-05-01 05:30:51] 2026-05-01 03:30:06,845 | INFO     | will attempt to kill all subprocesses of pid=25473
[2026-05-01 05:30:51] 2026-05-01 03:30:06,913 | INFO     | process IDs to be killed: [25473] (in reverse order)
[2026-05-01 05:30:51] 2026-05-01 03:30:07,916 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 05:30:51] 2026-05-01 03:30:07,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 05:30:51] 2026-05-01 03:30:07,918 | INFO     | did not find any defunct processes belonging to 25473
[2026-05-01 05:30:51] 2026-05-01 03:30:07,920 | INFO     | did not find any defunct processes belonging to 25473
[2026-05-01 05:30:51] 2026-05-01 03:30:07,920 | INFO     | Ready for new job
[2026-05-01 05:30:51] 2026-05-01 03:30:07,922 | INFO     | ***************************************
[2026-05-01 05:30:51] 2026-05-01 03:30:07,923 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 05:30:51] 2026-05-01 03:30:07,923 | INFO     | ***************************************
[2026-05-01 05:30:51] 2026-05-01 03:30:07,923 | INFO     | 
[2026-05-01 05:30:51] 2026-05-01 03:30:07,929 | INFO     | pilot is running in a VM
[2026-05-01 05:30:51] 2026-05-01 03:30:07,929 | INFO     | architecture information:
[2026-05-01 05:30:51] 2026-05-01 03:30:07,938 | INFO     | executing command: cat /etc/os-release
[2026-05-01 05:30:51] 2026-05-01 03:30:08,210 | INFO     | cat /etc/os-release:
[2026-05-01 05:30:51] NAME="CentOS Linux"
[2026-05-01 05:30:51] VERSION="7 (Core)"
[2026-05-01 05:30:51] ID="centos"
[2026-05-01 05:30:51] ID_LIKE="rhel fedora"
[2026-05-01 05:30:51] VERSION_ID="7"
[2026-05-01 05:30:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 05:30:51] ANSI_COLOR="0;31"
[2026-05-01 05:30:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 05:30:51] HOME_URL="https://www.centos.org/"
[2026-05-01 05:30:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 05:30:51] 
[2026-05-01 05:30:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 05:30:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 05:30:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 05:30:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 05:30:51] 
[2026-05-01 05:30:51] 2026-05-01 03:30:08,210 | INFO     | ***************************************
[2026-05-01 05:30:51] 2026-05-01 03:30:08,713 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-05-01 05:30:51] 2026-05-01 03:30:08,946 | INFO     | sufficient remaining disk space (496029925376 B)
[2026-05-01 05:30:51] 2026-05-01 03:30:08,947 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 05:30:51] 2026-05-01 03:30:08,947 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 05:30:51] 2026-05-01 03:30:08,947 | INFO     | update_server=False
[2026-05-01 05:30:51] 2026-05-01 03:30:08,947 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 05:30:51] 2026-05-01 03:30:08,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 05:30:51] 2026-05-01 03:30:09,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 05:30:51] 2026-05-01 03:30:09,376 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-05-01 05:30:51] 2026-05-01 03:30:09,377 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-05-01 05:30:51] 2026-05-01 03:30:09,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 05:30:51] 2026-05-01 03:30:09,377 | INFO     | will abort loop
[2026-05-01 05:30:51] 2026-05-01 03:30:09,434 | INFO     | all data control threads have been joined
[2026-05-01 05:30:51] 2026-05-01 03:30:09,537 | INFO     | all job control threads have been joined
[2026-05-01 05:30:51] 2026-05-01 03:30:09,953 | INFO     | [job] retrieve thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,126 | INFO     | all payload control threads have been joined
[2026-05-01 05:30:51] 2026-05-01 03:30:10,241 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 05:30:51] 2026-05-01 03:30:10,382 | INFO     | [job] job monitor thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,438 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,440 | INFO     | [data] control thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,543 | INFO     | [job] control thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,899 | INFO     | [job] validate thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:10,955 | INFO     | [data] copytool_out thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,121 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,132 | INFO     | [payload] control thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,367 | INFO     | [job] queue monitor thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,372 | INFO     | [payload] failed_post thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,400 | INFO     | [data] copytool_in thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:11,414 | INFO     | [payload] validate_post thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:13,265 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 05:30:51] 2026-05-01 03:30:38,248 | INFO     | PID=21019 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-05-01 05:30:51] 2026-05-01 03:30:38,248 | INFO     | .. there are 2 such processes running
[2026-05-01 05:30:51] 2026-05-01 03:30:38,257 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 05:30:51] 2026-05-01 03:30:38,258 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 05:30:51] 2026-05-01 03:30:38,258 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 05:30:51] 2026-05-01 03:30:41,224 | INFO     | [monitor] cgroup control has ended
[2026-05-01 05:30:51] 2026-05-01 03:30:41,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140633374533440)>', '<ExcThread(monitor, started 140632865634048)>']
[2026-05-01 05:30:51] 2026-05-01 03:30:42,281 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 05:30:51] 2026-05-01 03:30:42,281 | INFO     | [monitor] control thread has ended
[2026-05-01 05:30:51] 2026-05-01 03:30:46,322 | INFO     | all workflow threads have been joined
[2026-05-01 05:30:51] 2026-05-01 03:30:46,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 05:30:51] 2026-05-01 03:30:46,323 | INFO     | traces error code: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:46,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 05:30:51] 2026-05-01 03:30:46,842 [wrapper] ==== pilot stdout END ====
[2026-05-01 05:30:51] 2026-05-01 03:30:46,947 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 05:30:51] 2026-05-01 03:30:47,068 [wrapper] pilotpid: 21019
[2026-05-01 05:30:51] 2026-05-01 03:30:47,128 [wrapper] Pilot exit status: 0
[2026-05-01 05:30:51] 2026-05-01 03:30:47,659 [wrapper] pandaids: 7122042405
[2026-05-01 05:30:51] 2026-05-01 03:30:48,493 [wrapper] cleanup supervisor_pilot  2001 21020
[2026-05-01 05:30:51] 2026-05-01 03:30:48,601 [wrapper] Test setup, not cleaning
[2026-05-01 05:30:51] 2026-05-01 03:30:48,699 [wrapper] apfmon messages muted
[2026-05-01 05:30:51] 2026-05-01 03:30:48,822 [wrapper] ==== wrapper stdout END ====
[2026-05-01 05:30:51] 2026-05-01 03:30:48,918 [wrapper] ==== wrapper stderr END ====
[2026-05-01 05:30:51]  *** Error codes and diagnostics ***
[2026-05-01 05:30:51]     "exeErrorCode": 0,
[2026-05-01 05:30:51]     "pilotErrorCode": 0,
[2026-05-01 05:30:51]  *** Listing of results directory ***
[2026-05-01 05:30:51] total 473088
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:51 pilot3.tar.gz
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:56 queuedata.json
[2026-05-01 05:30:51] -rwx------. 1 boinc boinc     36322 Apr 30 11:04 runpilot2-wrapper.sh
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc       100 Apr 30 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 05:30:51] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 22:01 run_atlas
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc       105 Apr 30 22:01 job.xml
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc      6307 Apr 30 22:01 init_data.xml
[2026-05-01 05:30:51] -rw-r--r--. 2 boinc boinc 298880451 Apr 30 22:01 EVNT.50017278._000007.pool.root.1
[2026-05-01 05:30:51] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:01 start_atlas.sh
[2026-05-01 05:30:51] drwxrwx--x. 2 boinc boinc        68 Apr 30 22:01 shared
[2026-05-01 05:30:51] -rw-r--r--. 2 boinc boinc    697403 Apr 30 22:01 input.tar.gz
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc         0 Apr 30 22:01 boinc_lockfile
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc      2540 Apr 30 22:01 pandaJob.out
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc       415 Apr 30 22:07 workernode_map.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc    997594 Apr 30 22:07 agis_schedconf.cvmfs.json
[2026-05-01 05:30:51] drwx------. 5 boinc boinc      4096 Apr 30 22:07 pilot3
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc 175550692 May  1 05:28 HITS.50017283._000173.pool.root.1
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc       490 May  1 05:29 boinc_task_state.xml
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc      1010 May  1 05:29 memory_monitor_summary.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc   1510091 May  1 05:29 agis_ddmendpoints.agis.ALL.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc    518839 May  1 05:29 log.50017283._000173.job.log.tgz.1
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc      6332 May  1 05:30 heartbeat_new.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc      6223 May  1 05:30 heartbeat.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc        95 May  1 05:30 pilot_heartbeat.json
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc      5069 May  1 05:30 pilotlog.txt
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc   2425612 May  1 05:30 log.50017283._000173.job.log.1
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc      8192 May  1 05:30 boinc_mmap_file
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc        29 May  1 05:30 wrapper_checkpoint.txt
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc       357 May  1 05:30 output.list
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc       410 May  1 05:30 runtime_log
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc   2959360 May  1 05:30 result.tar.gz
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc      8439 May  1 05:30 runtime_log.err
[2026-05-01 05:30:51] -rw-------. 1 boinc boinc       657 May  1 05:30 1b171cfd2fbd.diag
[2026-05-01 05:30:51] -rw-r--r--. 1 boinc boinc     20557 May  1 05:30 stderr.txt
[2026-05-01 05:30:52] HITS file was successfully produced:
[2026-05-01 05:30:52] -rw-------. 1 boinc boinc 175550692 May  1 05:28 shared/HITS.pool.root.1
[2026-05-01 05:30:52]  *** Contents of shared directory: ***
[2026-05-01 05:30:52] total 466908
[2026-05-01 05:30:52] -rw-r--r--. 2 boinc boinc 298880451 Apr 30 22:01 ATLAS.root_0
[2026-05-01 05:30:52] -rw-r--r--. 2 boinc boinc     15667 Apr 30 22:01 start_atlas.sh
[2026-05-01 05:30:52] -rw-r--r--. 2 boinc boinc    697403 Apr 30 22:01 input.tar.gz
[2026-05-01 05:30:52] -rw-------. 1 boinc boinc 175550692 May  1 05:28 HITS.pool.root.1
[2026-05-01 05:30:52] -rw-------. 1 boinc boinc   2959360 May  1 05:30 result.tar.gz
05:30:53 (17050): run_atlas exited; CPU time 101312.628765
05:30:53 (17050): called boinc_finish(0)

</stderr_txt>
]]>

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