Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:51:57 (3392246): wrapper (7.7.26015): starting
14:51:57 (3392246): wrapper: running run_atlas (--nthreads 4)
[2026-05-03 14:51:57] Arguments: --nthreads 4
[2026-05-03 14:51:57] Threads: 4
[2026-05-03 14:51:57] Checking for CVMFS
[2026-05-03 14:51:57] No cvmfs_config command found, will try listing directly
[2026-05-03 14:51:57] CVMFS is ok
[2026-05-03 14:51:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-03 14:51:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-03 14:51:57] Further information can be found at the LHC@home message board.
[2026-05-03 14:51:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-03 14:51:57] Checking for apptainer binary...
[2026-05-03 14:51:57] which: no apptainer in ((null))
[2026-05-03 14:51:57] apptainer is not installed, using version from CVMFS
[2026-05-03 14:51:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-03 14:51:57] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/3/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-05-03 14:51:57] apptainer works
[2026-05-03 14:51:58] Set ATHENA_PROC_NUMBER=4
[2026-05-03 14:51:58] Set ATHENA_CORE_NUMBER=4
[2026-05-03 14:51:58] Starting ATLAS job with PandaID=7122042317
[2026-05-03 14:51:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 20:19:02]  *** The last 200 lines of the pilot log: ***
[2026-05-03 20:19:02] 2026-05-03 18:17:57,834 | INFO     | current chi2=1.3945862349027591 (change=-0.01881308682990663 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,834 | INFO     | right removable region: 314
[2026-05-03 20:19:02] 2026-05-03 18:17:57,834 | INFO     | sum of square deviations: 9691828230.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,837 | INFO     | sum of deviations: 11505312235.999998
[2026-05-03 20:19:02] 2026-05-03 18:17:57,837 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,837 | INFO     | mean y: 2339963.634920635
[2026-05-03 20:19:02] 2026-05-03 18:17:57,837 | INFO     | intersect: 2339963.634920635
[2026-05-03 20:19:02] 2026-05-03 18:17:57,838 | INFO     | chi2: 0.0071355044124756265
[2026-05-03 20:19:02] 2026-05-03 18:17:57,838 | INFO     | current chi2=0.0071355044124756265 (change=99.48824628821794 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,838 | INFO     | sum of square deviations: 9237596457.5
[2026-05-03 20:19:02] 2026-05-03 18:17:57,841 | INFO     | sum of deviations: 10456045044.5
[2026-05-03 20:19:02] 2026-05-03 18:17:57,841 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,841 | INFO     | mean y: 2340309.3903225805
[2026-05-03 20:19:02] 2026-05-03 18:17:57,842 | INFO     | intersect: 2340309.3903225805
[2026-05-03 20:19:02] 2026-05-03 18:17:57,842 | INFO     | chi2: 0.004080743652025229
[2026-05-03 20:19:02] 2026-05-03 18:17:57,842 | INFO     | current chi2=0.004080743652025229 (change=42.81071924094801 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,842 | INFO     | sum of square deviations: 8797783560.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,845 | INFO     | sum of deviations: 11761391456.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,845 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,845 | INFO     | mean y: 2339856.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,845 | INFO     | intersect: 2339856.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,846 | INFO     | chi2: 0.0026187280084478464
[2026-05-03 20:19:02] 2026-05-03 18:17:57,846 | INFO     | current chi2=0.0026187280084478464 (change=35.82718661712064 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,846 | INFO     | sum of square deviations: 8372156975.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | sum of deviations: 12735733720.000004
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | mean y: 2339506.933333333
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | intersect: 2339506.933333333
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | chi2: 0.0015327960581821153
[2026-05-03 20:19:02] 2026-05-03 18:17:57,849 | INFO     | current chi2=0.0015327960581821153 (change=41.46791674288377 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,850 | INFO     | sum of square deviations: 7960484140.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,852 | INFO     | sum of deviations: 12399339948.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,852 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,853 | INFO     | mean y: 2339634.7830508472
[2026-05-03 20:19:02] 2026-05-03 18:17:57,853 | INFO     | intersect: 2339634.7830508472
[2026-05-03 20:19:02] 2026-05-03 18:17:57,853 | INFO     | chi2: 0.0009632671122407799
[2026-05-03 20:19:02] 2026-05-03 18:17:57,853 | INFO     | current chi2=0.0009632671122407799 (change=37.15621154563723 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,854 | INFO     | sum of square deviations: 7562532492.5
[2026-05-03 20:19:02] 2026-05-03 18:17:57,856 | INFO     | sum of deviations: 11288166113.5
[2026-05-03 20:19:02] 2026-05-03 18:17:57,856 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,856 | INFO     | mean y: 2340060.644827586
[2026-05-03 20:19:02] 2026-05-03 18:17:57,856 | INFO     | intersect: 2340060.644827586
[2026-05-03 20:19:02] 2026-05-03 18:17:57,857 | INFO     | chi2: 0.0008453152832238259
[2026-05-03 20:19:02] 2026-05-03 18:17:57,857 | INFO     | current chi2=0.0008453152832238259 (change=12.24497623951585 %)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,857 | INFO     | left removable region: 30
[2026-05-03 20:19:02] 2026-05-03 18:17:57,857 | INFO     | sum of square deviations: 7102775035.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | sum of deviations: 10772113647.000002
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | mean x (centered): 0.0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | mean y: 2339855.2253521127
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | intersect: 2339855.2253521127
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | chi2: 0.0008327556079604027
[2026-05-03 20:19:02] 2026-05-03 18:17:57,860 | INFO     | current memory leak: 1.52 B/s (using 284 data points, chi2=0.00)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,861 | INFO     | could have reported an average CPU frequency of 2667 MHz (14 samples)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,861 | INFO     | ..............................
[2026-05-03 20:19:02] 2026-05-03 18:17:57,861 | INFO     | . Timing measurements:
[2026-05-03 20:19:02] 2026-05-03 18:17:57,861 | INFO     | . get job = 0 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,861 | INFO     | . initial setup = 9 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | . payload setup = 16 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | . stage-in = 0 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | . payload execution = 19499 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | . stage-out = 1 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | . log creation = 0 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,862 | INFO     | ..............................
[2026-05-03 20:19:02] 2026-05-03 18:17:57,956 | INFO     | 
[2026-05-03 20:19:02] 2026-05-03 18:17:57,956 | INFO     | job summary report
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | --------------------------------------------------
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | PanDA job id: 7122042317
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | task id: 50017283
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | errors: (none)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | pilot state: finished 
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | transexitcode: 0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | exeerrorcode: 0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | exeerrordiag: 
[2026-05-03 20:19:02] 2026-05-03 18:17:57,957 | INFO     | exitcode: 0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | exitmsg: OK
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | cpuconsumptiontime: 72878 s
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | nevents: 400
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | neventsw: 0
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | pid: 3401741
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | pgrp: 3401741
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | corecount: 4
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | event service: False
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | sizes: {0: 2275249, 1: 2277134, 12: 2277134, 19519: 2310945, 19520: 2320021, 19523: 2320159}
[2026-05-03 20:19:02] 2026-05-03 18:17:57,958 | INFO     | --------------------------------------------------
[2026-05-03 20:19:02] 2026-05-03 18:17:57,959 | INFO     | 
[2026-05-03 20:19:02] 2026-05-03 18:17:57,959 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/3
[2026-05-03 20:19:02] 2026-05-03 18:17:57,996 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 20:19:02] 2026-05-03 18:17:57,999 | INFO     | job 7122042317 has completed (purged errors)
[2026-05-03 20:19:02] 2026-05-03 18:17:57,999 | INFO     | overall cleanup function is called
[2026-05-03 20:19:02] 2026-05-03 18:17:58,105 | INFO     | number of running child processes to parent process 3401741: 1
[2026-05-03 20:19:02] 2026-05-03 18:17:58,105 | INFO     | maximum number of monitored processes: 6
[2026-05-03 20:19:02] 2026-05-03 18:17:58,105 | INFO     | aborting job monitoring since job object (job id=7122042317) has expired
[2026-05-03 20:19:02] 2026-05-03 18:17:59,005 | INFO     | --- collectZombieJob: --- 10, [3401741]
[2026-05-03 20:19:02] 2026-05-03 18:17:59,005 | INFO     | zombie collector waiting for pid 3401741
[2026-05-03 20:19:02] 2026-05-03 18:17:59,005 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 20:19:02] 2026-05-03 18:17:59,005 | INFO     | collected zombie processes
[2026-05-03 20:19:02] 2026-05-03 18:17:59,005 | INFO     | will attempt to kill all subprocesses of pid=3401741
[2026-05-03 20:19:02] 2026-05-03 18:17:59,689 | INFO     | process IDs to be killed: [3401741] (in reverse order)
[2026-05-03 20:19:02] 2026-05-03 18:18:00,024 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 20:19:02] 2026-05-03 18:18:00,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 20:19:02] 2026-05-03 18:18:00,054 | INFO     | did not find any defunct processes belonging to 3401741
[2026-05-03 20:19:02] 2026-05-03 18:18:00,079 | INFO     | did not find any defunct processes belonging to 3401741
[2026-05-03 20:19:02] 2026-05-03 18:18:00,080 | INFO     | Ready for new job
[2026-05-03 20:19:02] 2026-05-03 18:18:00,083 | INFO     | ***************************************
[2026-05-03 20:19:02] 2026-05-03 18:18:00,083 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 20:19:02] 2026-05-03 18:18:00,083 | INFO     | ***************************************
[2026-05-03 20:19:02] 2026-05-03 18:18:00,083 | INFO     | 
[2026-05-03 20:19:02] 2026-05-03 18:18:00,092 | INFO     | architecture information:
[2026-05-03 20:19:02] 2026-05-03 18:18:00,093 | INFO     | executing command: cat /etc/os-release
[2026-05-03 20:19:02] 2026-05-03 18:18:00,116 | INFO     | cat /etc/os-release:
[2026-05-03 20:19:02] NAME="CentOS Linux"
[2026-05-03 20:19:02] VERSION="7 (Core)"
[2026-05-03 20:19:02] ID="centos"
[2026-05-03 20:19:02] ID_LIKE="rhel fedora"
[2026-05-03 20:19:02] VERSION_ID="7"
[2026-05-03 20:19:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 20:19:02] ANSI_COLOR="0;31"
[2026-05-03 20:19:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 20:19:02] HOME_URL="https://www.centos.org/"
[2026-05-03 20:19:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 20:19:02] 
[2026-05-03 20:19:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 20:19:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 20:19:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 20:19:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 20:19:02] 
[2026-05-03 20:19:02] 2026-05-03 18:18:00,117 | INFO     | ***************************************
[2026-05-03 20:19:02] 2026-05-03 18:18:00,620 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/3
[2026-05-03 20:19:02] 2026-05-03 18:18:00,648 | INFO     | sufficient remaining disk space (229232345088 B)
[2026-05-03 20:19:02] 2026-05-03 18:18:00,648 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 20:19:02] 2026-05-03 18:18:00,648 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 20:19:02] 2026-05-03 18:18:00,648 | INFO     | update_server=False
[2026-05-03 20:19:02] 2026-05-03 18:18:00,648 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 20:19:02] 2026-05-03 18:18:00,696 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 20:19:02] 2026-05-03 18:18:00,993 | INFO     | all payload control threads have been joined
[2026-05-03 20:19:02] 2026-05-03 18:18:01,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 20:19:02] 2026-05-03 18:18:01,345 | INFO     | all data control threads have been joined
[2026-05-03 20:19:02] 2026-05-03 18:18:01,436 | INFO     | all job control threads have been joined
[2026-05-03 20:19:02] 2026-05-03 18:18:01,614 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 20:19:02] 2026-05-03 18:18:01,614 | INFO     | aborting loop
[2026-05-03 20:19:02] 2026-05-03 18:18:01,654 | INFO     | [job] retrieve thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:01,666 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:01,792 | INFO     | [data] copytool_in thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:01,998 | INFO     | [payload] control thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,091 | INFO     | [job] validate thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,105 | INFO     | [payload] failed_post thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,350 | INFO     | [data] control thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,444 | INFO     | [job] control thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,491 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,620 | INFO     | [job] job monitor thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,707 | INFO     | [data] copytool_out thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,747 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,782 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:02,965 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 20:19:02] 2026-05-03 18:18:03,094 | INFO     | [payload] validate_post thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:03,971 | INFO     | [job] queue monitor thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:05,281 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 20:19:02] 2026-05-03 18:18:30,775 | INFO     | PID=3396387 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 20:19:02] 2026-05-03 18:18:30,775 | INFO     | .. there are 25 such processes running
[2026-05-03 20:19:02] 2026-05-03 18:18:30,775 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 20:19:02] 2026-05-03 18:18:30,775 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 20:19:02] 2026-05-03 18:18:30,775 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 20:19:02] 2026-05-03 18:18:55,834 | INFO     | [monitor] cgroup control has ended
[2026-05-03 20:19:02] 2026-05-03 18:18:56,699 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23450910639936)>', '<ExcThread(monitor, started 23450673751808)>']
[2026-05-03 20:19:02] 2026-05-03 18:18:56,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 20:19:02] 2026-05-03 18:18:56,907 | INFO     | [monitor] control thread has ended
[2026-05-03 20:19:02] 2026-05-03 18:19:01,724 | INFO     | all workflow threads have been joined
[2026-05-03 20:19:02] 2026-05-03 18:19:01,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 20:19:02] 2026-05-03 18:19:01,724 | INFO     | traces error code: 0
[2026-05-03 20:19:02] 2026-05-03 18:19:01,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 20:19:02] 2026-05-03 18:19:01,877 [wrapper] ==== pilot stdout END ====
[2026-05-03 20:19:02] 2026-05-03 18:19:01,881 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 20:19:02] 2026-05-03 18:19:01,888 [wrapper] pilotpid: 3396387
[2026-05-03 20:19:02] 2026-05-03 18:19:01,892 [wrapper] Pilot exit status: 0
[2026-05-03 20:19:02] 2026-05-03 18:19:01,909 [wrapper] pandaids: 7122042317
[2026-05-03 20:19:02] 2026-05-03 18:19:02,117 [wrapper] cleanup supervisor_pilot   38329 3396388
[2026-05-03 20:19:02] 2026-05-03 18:19:02,122 [wrapper] Test setup, not cleaning
[2026-05-03 20:19:02] 2026-05-03 18:19:02,126 [wrapper] apfmon messages muted
[2026-05-03 20:19:02] 2026-05-03 18:19:02,129 [wrapper] ==== wrapper stdout END ====
[2026-05-03 20:19:02] 2026-05-03 18:19:02,133 [wrapper] ==== wrapper stderr END ====
[2026-05-03 20:19:02]  *** Error codes and diagnostics ***
[2026-05-03 20:19:02]     "exeErrorCode": 0,
[2026-05-03 20:19:02]     "pilotErrorCode": 0,
[2026-05-03 20:19:02]  *** Listing of results directory ***
[2026-05-03 20:19:02] total 473584
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:51 pilot3.tar.gz
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:56 queuedata.json
[2026-05-03 20:19:02] -rwx------. 1 boinc boinc     36322 Apr 30 11:04 runpilot2-wrapper.sh
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc       100 May  3 14:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 20:19:02] -rwxr-xr-x. 1 boinc boinc      7986 May  3 14:51 run_atlas
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc       105 May  3 14:51 job.xml
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc      6541 May  3 14:51 init_data.xml
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc 297216770 May  3 14:51 EVNT.50017278._000004.pool.root.1
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc     15667 May  3 14:51 start_atlas.sh
[2026-05-03 20:19:02] drwxrwx--x. 2 boinc boinc      4096 May  3 14:51 shared
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc    697400 May  3 14:51 input.tar.gz
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc         0 May  3 14:51 boinc_lockfile
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc      2538 May  3 14:51 pandaJob.out
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc   1002976 May  3 14:52 agis_schedconf.cvmfs.json
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc       442 May  3 14:52 workernode_map.json
[2026-05-03 20:19:02] drwx------. 5 boinc boinc      4096 May  3 14:52 pilot3
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc 179255406 May  3 20:17 HITS.50017283._000096.pool.root.1
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc       489 May  3 20:17 boinc_task_state.xml
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc        95 May  3 20:17 pilot_heartbeat.json
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc      1024 May  3 20:17 memory_monitor_summary.json
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc   1508687 May  3 20:17 agis_ddmendpoints.agis.ALL.json
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc    400856 May  3 20:17 log.50017283._000096.job.log.tgz.1
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc      6358 May  3 20:17 heartbeat_new.json
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc      6249 May  3 20:17 heartbeat.json
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc      8192 May  3 20:18 boinc_mmap_file
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc        28 May  3 20:18 wrapper_checkpoint.txt
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc      4833 May  3 20:19 pilotlog.txt
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc   1768924 May  3 20:19 log.50017283._000096.job.log.1
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc       357 May  3 20:19 output.list
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc       410 May  3 20:19 runtime_log
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc   2191360 May  3 20:19 result.tar.gz
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc      8828 May  3 20:19 runtime_log.err
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc       666 May  3 20:19 1b1711a3962a.diag
[2026-05-03 20:19:02] -rw-r--r--. 1 boinc boinc     20677 May  3 20:19 stderr.txt
[2026-05-03 20:19:02] HITS file was successfully produced:
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc 179255406 May  3 20:17 shared/HITS.pool.root.1
[2026-05-03 20:19:02]  *** Contents of shared directory: ***
[2026-05-03 20:19:02] total 468156
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc 297216770 May  3 14:51 ATLAS.root_0
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc     15667 May  3 14:51 start_atlas.sh
[2026-05-03 20:19:02] -rw-r--r--. 2 boinc boinc    697400 May  3 14:51 input.tar.gz
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc 179255406 May  3 20:17 HITS.pool.root.1
[2026-05-03 20:19:02] -rw-------. 1 boinc boinc   2191360 May  3 20:19 result.tar.gz
20:19:04 (3392246): run_atlas exited; CPU time 74139.675222
20:19:04 (3392246): called boinc_finish(0)

</stderr_txt>
]]>

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