Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:13:55 (1114294): wrapper (7.7.26015): starting
04:13:55 (1114294): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 04:13:55] Arguments: --nthreads 4
[2026-05-01 04:13:55] Threads: 4
[2026-05-01 04:13:55] Checking for CVMFS
[2026-05-01 04:13:55] No cvmfs_config command found, will try listing directly
[2026-05-01 04:13:55] CVMFS is ok
[2026-05-01 04:13:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 04:13:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 04:13:55] Further information can be found at the LHC@home message board.
[2026-05-01 04:13:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 04:13:55] Checking for apptainer binary...
[2026-05-01 04:13:55] which: no apptainer in ((null))
[2026-05-01 04:13:55] apptainer is not installed, using version from CVMFS
[2026-05-01 04:13:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 04:13:55] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-05-01 04:13:55] apptainer works
[2026-05-01 04:13:55] Set ATHENA_PROC_NUMBER=4
[2026-05-01 04:13:55] Set ATHENA_CORE_NUMBER=4
[2026-05-01 04:13:56] Starting ATLAS job with PandaID=7121887116
[2026-05-01 04:13:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:04:40 (1435303): wrapper (7.7.26015): starting
08:04:40 (1435303): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 08:04:40] Arguments: --nthreads 4
[2026-05-01 08:04:40] Threads: 4
[2026-05-01 08:04:40] This job has been restarted, cleaning up previous attempt
[2026-05-01 08:04:40] Checking for CVMFS
[2026-05-01 08:04:40] No cvmfs_config command found, will try listing directly
[2026-05-01 08:04:40] CVMFS is ok
[2026-05-01 08:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 08:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 08:04:40] Further information can be found at the LHC@home message board.
[2026-05-01 08:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 08:04:40] Checking for apptainer binary...
[2026-05-01 08:04:40] which: no apptainer in ((null))
[2026-05-01 08:04:40] apptainer is not installed, using version from CVMFS
[2026-05-01 08:04:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 08:04:40] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-05-01 08:04:40] apptainer works
[2026-05-01 08:04:40] Set ATHENA_PROC_NUMBER=4
[2026-05-01 08:04:40] Set ATHENA_CORE_NUMBER=4
[2026-05-01 08:04:40] Starting ATLAS job with PandaID=7121887116
[2026-05-01 08:04:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 11:39:15]  *** The last 200 lines of the pilot log: ***
[2026-05-01 11:39:15] 2026-05-01 09:38:08,857 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1340920/.job.ad'
[2026-05-01 11:39:15] 2026-05-01 09:38:08,857 | INFO     | total number of processed events: 400 (read)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,871 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7121887116/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,872 | INFO     | extracted standard info from prmon json
[2026-05-01 11:39:15] 2026-05-01 09:38:08,872 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 11:39:15] 2026-05-01 09:38:08,873 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 11:39:15] 2026-05-01 09:38:08,873 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 11:39:15] 2026-05-01 09:38:08,877 | INFO     | fitting pss+swap vs Time
[2026-05-01 11:39:15] 2026-05-01 09:38:08,877 | INFO     | sum of square deviations: 2871616632.5
[2026-05-01 11:39:15] 2026-05-01 09:38:08,879 | INFO     | sum of deviations: 15914257639.500002
[2026-05-01 11:39:15] 2026-05-01 09:38:08,879 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,879 | INFO     | mean y: 2317038.223809524
[2026-05-01 11:39:15] 2026-05-01 09:38:08,879 | INFO     | intersect: 2317038.223809524
[2026-05-01 11:39:15] 2026-05-01 09:38:08,879 | INFO     | chi2: 1.816398148829398
[2026-05-01 11:39:15] 2026-05-01 09:38:08,880 | INFO     | sum of square deviations: 2671343110.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,881 | INFO     | sum of deviations: 27691675290.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,881 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,881 | INFO     | mean y: 2325823.326829268
[2026-05-01 11:39:15] 2026-05-01 09:38:08,881 | INFO     | intersect: 2325823.326829268
[2026-05-01 11:39:15] 2026-05-01 09:38:08,882 | INFO     | chi2: 1.1080878138672967
[2026-05-01 11:39:15] 2026-05-01 09:38:08,882 | INFO     | current chi2=1.1080878138672967 (change=38.995323542835656 %)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,882 | INFO     | sum of square deviations: 2480604650.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,883 | INFO     | sum of deviations: 26810295470.499996
[2026-05-01 11:39:15] 2026-05-01 09:38:08,884 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,884 | INFO     | mean y: 2325118.555
[2026-05-01 11:39:15] 2026-05-01 09:38:08,884 | INFO     | intersect: 2325118.555
[2026-05-01 11:39:15] 2026-05-01 09:38:08,885 | INFO     | chi2: 1.1084817451233346
[2026-05-01 11:39:15] 2026-05-01 09:38:08,885 | INFO     | current chi2=1.1084817451233346 (change=-0.03555054492144283 %)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,885 | INFO     | right removable region: 199
[2026-05-01 11:39:15] 2026-05-01 09:38:08,885 | INFO     | sum of square deviations: 2671343110.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,886 | INFO     | sum of deviations: -6554137375.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,886 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,886 | INFO     | mean y: 2333926.5951219513
[2026-05-01 11:39:15] 2026-05-01 09:38:08,887 | INFO     | intersect: 2333926.5951219513
[2026-05-01 11:39:15] 2026-05-01 09:38:08,887 | INFO     | chi2: 0.7223921354391553
[2026-05-01 11:39:15] 2026-05-01 09:38:08,887 | INFO     | current chi2=0.7223921354391553 (change=60.22941688722209 %)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,887 | INFO     | sum of square deviations: 2480604650.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,888 | INFO     | sum of deviations: -6893362553.5
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | mean y: 2334192.225
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | intersect: 2334192.225
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | chi2: 0.7222799303748917
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | current chi2=0.7222799303748917 (change=0.015532431592068664 %)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,889 | INFO     | left removable region: 10
[2026-05-01 11:39:15] 2026-05-01 09:38:08,890 | INFO     | sum of square deviations: 2093397390.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,891 | INFO     | sum of deviations: 4497307472.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,891 | INFO     | mean x (centered): 0.0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,891 | INFO     | mean y: 2343546.9365079366
[2026-05-01 11:39:15] 2026-05-01 09:38:08,891 | INFO     | intersect: 2343546.9365079366
[2026-05-01 11:39:15] 2026-05-01 09:38:08,892 | INFO     | chi2: 0.00033632860776066417
[2026-05-01 11:39:15] 2026-05-01 09:38:08,892 | INFO     | current memory leak: 2.15 B/s (using 189 data points, chi2=0.00)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,892 | INFO     | could have reported an average CPU frequency of 2555 MHz (11 samples)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | ..............................
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . Timing measurements:
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . get job = 0 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . initial setup = 0 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . payload setup = 7 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . stage-in = 0 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . payload execution = 12775 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,893 | INFO     | . stage-out = 1 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,894 | INFO     | . log creation = 0 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,894 | INFO     | ..............................
[2026-05-01 11:39:15] 2026-05-01 09:38:08,989 | INFO     | 
[2026-05-01 11:39:15] 2026-05-01 09:38:08,989 | INFO     | job summary report
[2026-05-01 11:39:15] 2026-05-01 09:38:08,989 | INFO     | --------------------------------------------------
[2026-05-01 11:39:15] 2026-05-01 09:38:08,989 | INFO     | PanDA job id: 7121887116
[2026-05-01 11:39:15] 2026-05-01 09:38:08,989 | INFO     | task id: 50016906
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | errors: (none)
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | pilot state: finished 
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | transexitcode: 0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | exeerrorcode: 0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | exeerrordiag: 
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | exitcode: 0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | exitmsg: OK
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | cpuconsumptiontime: 49362 s
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | nevents: 400
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | neventsw: 0
[2026-05-01 11:39:15] 2026-05-01 09:38:08,990 | INFO     | pid: 1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | pgrp: 1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | corecount: 4
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | event service: False
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | sizes: {0: 2278343, 11: 2278343, 12786: 2308411, 12788: 2317761, 12789: 2317899}
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | --------------------------------------------------
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | 
[2026-05-01 11:39:15] 2026-05-01 09:38:08,991 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-05-01 11:39:15] 2026-05-01 09:38:09,015 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,016 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,016 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,016 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | job 7121887116 has completed (purged errors)
[2026-05-01 11:39:15] 2026-05-01 09:38:09,018 | INFO     | overall cleanup function is called
[2026-05-01 11:39:15] 2026-05-01 09:38:09,177 | INFO     | number of running child processes to parent process 1449463: 1
[2026-05-01 11:39:15] 2026-05-01 09:38:09,177 | INFO     | maximum number of monitored processes: 6
[2026-05-01 11:39:15] 2026-05-01 09:38:09,177 | INFO     | aborting job monitoring since job object (job id=7121887116) has expired
[2026-05-01 11:39:15] 2026-05-01 09:38:10,031 | INFO     | --- collectZombieJob: --- 10, [1449463]
[2026-05-01 11:39:15] 2026-05-01 09:38:10,031 | INFO     | zombie collector waiting for pid 1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:10,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 11:39:15] 2026-05-01 09:38:10,031 | INFO     | collected zombie processes
[2026-05-01 11:39:15] 2026-05-01 09:38:10,031 | INFO     | will attempt to kill all subprocesses of pid=1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:10,314 | INFO     | process IDs to be killed: [1449463] (in reverse order)
[2026-05-01 11:39:15] 2026-05-01 09:38:10,439 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 11:39:15] 2026-05-01 09:38:10,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 11:39:15] 2026-05-01 09:38:10,451 | INFO     | did not find any defunct processes belonging to 1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:10,462 | INFO     | did not find any defunct processes belonging to 1449463
[2026-05-01 11:39:15] 2026-05-01 09:38:10,463 | INFO     | Ready for new job
[2026-05-01 11:39:15] 2026-05-01 09:38:10,465 | INFO     | ***************************************
[2026-05-01 11:39:15] 2026-05-01 09:38:10,465 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 11:39:15] 2026-05-01 09:38:10,465 | INFO     | ***************************************
[2026-05-01 11:39:15] 2026-05-01 09:38:10,465 | INFO     | 
[2026-05-01 11:39:15] 2026-05-01 09:38:10,469 | INFO     | architecture information:
[2026-05-01 11:39:15] 2026-05-01 09:38:10,469 | INFO     | executing command: cat /etc/os-release
[2026-05-01 11:39:15] 2026-05-01 09:38:10,487 | INFO     | cat /etc/os-release:
[2026-05-01 11:39:15] NAME="CentOS Linux"
[2026-05-01 11:39:15] VERSION="7 (Core)"
[2026-05-01 11:39:15] ID="centos"
[2026-05-01 11:39:15] ID_LIKE="rhel fedora"
[2026-05-01 11:39:15] VERSION_ID="7"
[2026-05-01 11:39:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 11:39:15] ANSI_COLOR="0;31"
[2026-05-01 11:39:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 11:39:15] HOME_URL="https://www.centos.org/"
[2026-05-01 11:39:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 11:39:15] 
[2026-05-01 11:39:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 11:39:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 11:39:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 11:39:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 11:39:15] 
[2026-05-01 11:39:15] 2026-05-01 09:38:10,488 | INFO     | ***************************************
[2026-05-01 11:39:15] 2026-05-01 09:38:10,991 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-05-01 11:39:15] 2026-05-01 09:38:11,010 | INFO     | sufficient remaining disk space (29381099520 B)
[2026-05-01 11:39:15] 2026-05-01 09:38:11,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 11:39:15] 2026-05-01 09:38:11,010 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 11:39:15] 2026-05-01 09:38:11,011 | INFO     | update_server=False
[2026-05-01 11:39:15] 2026-05-01 09:38:11,011 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 11:39:15] 2026-05-01 09:38:11,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 11:39:15] 2026-05-01 09:38:11,012 | INFO     | aborting loop
[2026-05-01 11:39:15] 2026-05-01 09:38:11,012 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 11:39:15] 2026-05-01 09:38:11,087 | INFO     | all data control threads have been joined
[2026-05-01 11:39:15] 2026-05-01 09:38:11,104 | INFO     | all payload control threads have been joined
[2026-05-01 11:39:15] 2026-05-01 09:38:11,285 | INFO     | job.realtimelogging is not enabled
[2026-05-01 11:39:15] 2026-05-01 09:38:12,017 | INFO     | [job] retrieve thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,018 | INFO     | [job] job monitor thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,087 | INFO     | [payload] validate_post thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,092 | INFO     | [data] control thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,109 | INFO     | [payload] control thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,226 | INFO     | [payload] failed_post thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,291 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,408 | INFO     | all job control threads have been joined
[2026-05-01 11:39:15] 2026-05-01 09:38:12,948 | INFO     | [job] validate thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:12,982 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,017 | INFO     | [data] copytool_out thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,200 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,273 | INFO     | [data] copytool_in thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,413 | INFO     | [job] control thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,475 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:13,998 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 11:39:15] 2026-05-01 09:38:13,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 11:39:15] 2026-05-01 09:38:15,003 | INFO     | [job] queue monitor thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:18,003 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 11:39:15] 2026-05-01 09:38:41,218 | INFO     | PID=1440744 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-01 11:39:15] 2026-05-01 09:38:41,218 | INFO     | .. there are 14 such processes running
[2026-05-01 11:39:15] 2026-05-01 09:38:41,218 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 11:39:15] 2026-05-01 09:38:41,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 11:39:15] 2026-05-01 09:38:41,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 11:39:15] 2026-05-01 09:39:09,444 | INFO     | [monitor] cgroup control has ended
[2026-05-01 11:39:15] 2026-05-01 09:39:10,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22449602692928)>', '<ExcThread(monitor, started 22449302550272)>']
[2026-05-01 11:39:15] 2026-05-01 09:39:11,365 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 11:39:15] 2026-05-01 09:39:11,365 | INFO     | [monitor] control thread has ended
[2026-05-01 11:39:15] 2026-05-01 09:39:15,474 | INFO     | all workflow threads have been joined
[2026-05-01 11:39:15] 2026-05-01 09:39:15,475 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 11:39:15] 2026-05-01 09:39:15,475 | INFO     | traces error code: 0
[2026-05-01 11:39:15] 2026-05-01 09:39:15,475 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 11:39:15] 2026-05-01 09:39:15,673 [wrapper] ==== pilot stdout END ====
[2026-05-01 11:39:15] 2026-05-01 09:39:15,675 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 11:39:15] 2026-05-01 09:39:15,678 [wrapper] pilotpid: 1440744
[2026-05-01 11:39:15] 2026-05-01 09:39:15,680 [wrapper] Pilot exit status: 0
[2026-05-01 11:39:15] 2026-05-01 09:39:15,691 [wrapper] pandaids: 7121887116 7121887116
[2026-05-01 11:39:15] 2026-05-01 09:39:15,766 [wrapper] cleanup supervisor_pilot 1667663 1440745
[2026-05-01 11:39:15] 2026-05-01 09:39:15,770 [wrapper] Test setup, not cleaning
[2026-05-01 11:39:15] 2026-05-01 09:39:15,773 [wrapper] apfmon messages muted
[2026-05-01 11:39:15] 2026-05-01 09:39:15,776 [wrapper] ==== wrapper stdout END ====
[2026-05-01 11:39:15] 2026-05-01 09:39:15,778 [wrapper] ==== wrapper stderr END ====
[2026-05-01 11:39:15]  *** Error codes and diagnostics ***
[2026-05-01 11:39:15]     "exeErrorCode": 0,
[2026-05-01 11:39:15]     "pilotErrorCode": 0,
[2026-05-01 11:39:15]  *** Listing of results directory ***
[2026-05-01 11:39:15] total 793640
[2026-05-01 11:39:15] drwx------. 5 boinc boinc      4096 Apr 22 11:13 pilot3
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:51 pilot3.tar.gz
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:56 queuedata.json
[2026-05-01 11:39:15] -rwx------. 1 boinc boinc     36322 Apr 30 11:01 runpilot2-wrapper.sh
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc       100 May  1 04:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 11:39:15] -rwxr-xr-x. 1 boinc boinc      7986 May  1 04:13 run_atlas
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc       105 May  1 04:13 job.xml
[2026-05-01 11:39:15] -rw-r--r--. 3 boinc boinc 315157297 May  1 04:13 EVNT.50016902._000002.pool.root.1
[2026-05-01 11:39:15] -rw-r--r--. 3 boinc boinc 315157297 May  1 04:13 ATLAS.root_0
[2026-05-01 11:39:15] -rw-r--r--. 2 boinc boinc     15667 May  1 04:13 start_atlas.sh
[2026-05-01 11:39:15] drwxrwx--x. 2 boinc boinc      4096 May  1 04:13 shared
[2026-05-01 11:39:15] -rw-r--r--. 2 boinc boinc    697398 May  1 04:13 input.tar.gz
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc         0 May  1 04:13 boinc_lockfile
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc      2553 May  1 08:04 pandaJob.out
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc   1001806 May  1 08:04 agis_schedconf.cvmfs.json
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc       452 May  1 08:04 workernode_map.json
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc      6491 May  1 10:15 init_data.xml
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc 175156608 May  1 11:37 HITS.50016906._000013.pool.root.1
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc        96 May  1 11:38 pilot_heartbeat.json
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc       490 May  1 11:38 boinc_task_state.xml
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc      1035 May  1 11:38 memory_monitor_summary.json
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc   1508687 May  1 11:38 agis_ddmendpoints.agis.ALL.json
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc    323176 May  1 11:38 log.50016906._000013.job.log.tgz.1
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc      6414 May  1 11:38 heartbeat_new.json
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc      6305 May  1 11:38 heartbeat.json
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc      8192 May  1 11:39 boinc_mmap_file
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc        29 May  1 11:39 wrapper_checkpoint.txt
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc      4904 May  1 11:39 pilotlog.txt
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc   1212757 May  1 11:39 log.50016906._000013.job.log.1
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc       357 May  1 11:39 output.list
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc       410 May  1 11:39 runtime_log
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc   1556480 May  1 11:39 result.tar.gz
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc      8905 May  1 11:39 runtime_log.err
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc       790 May  1 11:39 1a60de86cd90.diag
[2026-05-01 11:39:15] -rw-r--r--. 1 boinc boinc     22687 May  1 11:39 stderr.txt
[2026-05-01 11:39:15] HITS file was successfully produced:
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc 175156608 May  1 11:37 shared/HITS.pool.root.1
[2026-05-01 11:39:15]  *** Contents of shared directory: ***
[2026-05-01 11:39:15] total 481052
[2026-05-01 11:39:15] -rw-r--r--. 3 boinc boinc 315157297 May  1 04:13 ATLAS.root_0
[2026-05-01 11:39:15] -rw-r--r--. 2 boinc boinc     15667 May  1 04:13 start_atlas.sh
[2026-05-01 11:39:15] -rw-r--r--. 2 boinc boinc    697398 May  1 04:13 input.tar.gz
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc 175156608 May  1 11:37 HITS.pool.root.1
[2026-05-01 11:39:15] -rw-------. 1 boinc boinc   1556480 May  1 11:39 result.tar.gz
11:39:17 (1435303): run_atlas exited; CPU time 49775.302986
11:39:17 (1435303): called boinc_finish(0)

</stderr_txt>
]]>

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