Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:51:02 (3967338): wrapper (7.7.26015): starting
05:51:02 (3967338): wrapper: running run_atlas (--nthreads 9)
[2026-04-30 05:51:02] Arguments: --nthreads 9
[2026-04-30 05:51:02] Threads: 9
[2026-04-30 05:51:02] Checking for CVMFS
[2026-04-30 05:51:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 05:51:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 05:51:02] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 05:51:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 05:51:03] 2.13.3.0 8602 253007 668480 159044 1 59 10979110 21042176 5762 16776704 14 914985601 99.408 1343600660 31422 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 05:51:03] CVMFS is ok
[2026-04-30 05:51:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 05:51:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 05:51:03] Further information can be found at the LHC@home message board.
[2026-04-30 05:51:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 05:51:03] Checking for apptainer binary...
[2026-04-30 05:51:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 05:51:03] Running /usr/bin/apptainer --version
[2026-04-30 05:51:03] apptainer version 1.4.5-3.el9
[2026-04-30 05:51:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 05:51:03] c-16-16.aglt2.org
[2026-04-30 05:51:03] apptainer works
[2026-04-30 05:51:03] Set ATHENA_PROC_NUMBER=9
[2026-04-30 05:51:03] Set ATHENA_CORE_NUMBER=9
[2026-04-30 05:51:03] Starting ATLAS job with PandaID=7120562731
[2026-04-30 05:51:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
09:49:34 (3843): wrapper (7.7.26015): starting
09:49:34 (3843): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 09:49:34] Arguments: --nthreads 8
[2026-04-30 09:49:34] Threads: 8
[2026-04-30 09:49:34] This job has been restarted, cleaning up previous attempt
[2026-04-30 09:49:34] Checking for CVMFS
[2026-04-30 09:49:47] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 09:49:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 09:49:47] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 09:49:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 09:49:47] 2.13.3.0 7695 0 29516 159052 4 1 12173117 21042177 0 16776704 0 0 100.000 0 0 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-04-30 09:49:47] CVMFS is ok
[2026-04-30 09:49:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 09:49:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 09:49:47] Further information can be found at the LHC@home message board.
[2026-04-30 09:49:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 09:49:47] Checking for apptainer binary...
[2026-04-30 09:49:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 09:49:47] Running /usr/bin/apptainer --version
[2026-04-30 09:49:52] apptainer version 1.4.5-3.el9
[2026-04-30 09:49:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 09:49:55] c-16-16.aglt2.org
[2026-04-30 09:49:55] apptainer works
[2026-04-30 09:49:55] Set ATHENA_PROC_NUMBER=8
[2026-04-30 09:49:55] Set ATHENA_CORE_NUMBER=8
[2026-04-30 09:49:55] Starting ATLAS job with PandaID=7120562731
[2026-04-30 09:49:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 14:36:13]  *** The last 200 lines of the pilot log: ***
[2026-04-30 14:36:13] 2026-04-30 18:35:41,375 | INFO     | total number of processed events: 400 (read)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,386 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7120562731/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,387 | INFO     | extracted standard info from prmon json
[2026-04-30 14:36:13] 2026-04-30 18:35:41,387 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 14:36:13] 2026-04-30 18:35:41,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 14:36:13] 2026-04-30 18:35:41,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 14:36:13] 2026-04-30 18:35:41,397 | INFO     | fitting pss+swap vs Time
[2026-04-30 14:36:13] 2026-04-30 18:35:41,397 | INFO     | sum of square deviations: 6880054580.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,400 | INFO     | sum of deviations: 50900650046.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,401 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,401 | INFO     | mean y: 2557438.4234875445
[2026-04-30 14:36:13] 2026-04-30 18:35:41,401 | INFO     | intersect: 2557438.4234875445
[2026-04-30 14:36:13] 2026-04-30 18:35:41,402 | INFO     | chi2: 2.281440009466599
[2026-04-30 14:36:13] 2026-04-30 18:35:41,403 | INFO     | sum of square deviations: 6519285025.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,405 | INFO     | sum of deviations: 68103405653.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,406 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,406 | INFO     | mean y: 2564599.5144927534
[2026-04-30 14:36:13] 2026-04-30 18:35:41,406 | INFO     | intersect: 2564599.5144927534
[2026-04-30 14:36:13] 2026-04-30 18:35:41,407 | INFO     | chi2: 1.5918816553137987
[2026-04-30 14:36:13] 2026-04-30 18:35:41,407 | INFO     | current chi2=1.5918816553137987 (change=30.22469805436695 %)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,408 | INFO     | sum of square deviations: 6171352920.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,411 | INFO     | sum of deviations: 66868382207.00001
[2026-04-30 14:36:13] 2026-04-30 18:35:41,411 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,411 | INFO     | mean y: 2564058.140221402
[2026-04-30 14:36:13] 2026-04-30 18:35:41,411 | INFO     | intersect: 2564058.140221402
[2026-04-30 14:36:13] 2026-04-30 18:35:41,412 | INFO     | chi2: 1.591651080850042
[2026-04-30 14:36:13] 2026-04-30 18:35:41,412 | INFO     | current chi2=1.591651080850042 (change=0.01448439731603583 %)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,413 | INFO     | right removable region: 270
[2026-04-30 14:36:13] 2026-04-30 18:35:41,413 | INFO     | sum of square deviations: 6519285025.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,416 | INFO     | sum of deviations: 2806057401.000004
[2026-04-30 14:36:13] 2026-04-30 18:35:41,416 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,416 | INFO     | mean y: 2577621.3913043477
[2026-04-30 14:36:13] 2026-04-30 18:35:41,417 | INFO     | intersect: 2577621.3913043477
[2026-04-30 14:36:13] 2026-04-30 18:35:41,417 | INFO     | chi2: 0.7409152117086226
[2026-04-30 14:36:13] 2026-04-30 18:35:41,418 | INFO     | current chi2=0.7409152117086226 (change=67.52422993222386 %)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,418 | INFO     | sum of square deviations: 6171352920.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,421 | INFO     | sum of deviations: -3820934409.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,421 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,422 | INFO     | mean y: 2580502.2804428046
[2026-04-30 14:36:13] 2026-04-30 18:35:41,422 | INFO     | intersect: 2580502.2804428046
[2026-04-30 14:36:13] 2026-04-30 18:35:41,423 | INFO     | chi2: 0.7097799824994632
[2026-04-30 14:36:13] 2026-04-30 18:35:41,423 | INFO     | current chi2=0.7097799824994632 (change=4.202266159087027 %)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,423 | INFO     | left removable region: 10
[2026-04-30 14:36:13] 2026-04-30 18:35:41,424 | INFO     | sum of square deviations: 5449944045.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,426 | INFO     | sum of deviations: 13459206682.500002
[2026-04-30 14:36:13] 2026-04-30 18:35:41,427 | INFO     | mean x (centered): 0.0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,427 | INFO     | mean y: 2588236.696153846
[2026-04-30 14:36:13] 2026-04-30 18:35:41,427 | INFO     | intersect: 2588236.696153846
[2026-04-30 14:36:13] 2026-04-30 18:35:41,428 | INFO     | chi2: 0.008120713783656835
[2026-04-30 14:36:13] 2026-04-30 18:35:41,428 | INFO     | current memory leak: 2.47 B/s (using 260 data points, chi2=0.01)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,429 | INFO     | could have reported an average CPU frequency of 2899 MHz (13 samples)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,429 | INFO     | ..............................
[2026-04-30 14:36:13] 2026-04-30 18:35:41,430 | INFO     | . Timing measurements:
[2026-04-30 14:36:13] 2026-04-30 18:35:41,430 | INFO     | . get job = 0 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,430 | INFO     | . initial setup = 4 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,430 | INFO     | . payload setup = 6 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,431 | INFO     | . stage-in = 0 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,431 | INFO     | . payload execution = 17100 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,431 | INFO     | . stage-out = 2 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,431 | INFO     | . log creation = 0 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,432 | INFO     | ..............................
[2026-04-30 14:36:13] 2026-04-30 18:35:41,618 | WARNING  | process 45469 can no longer be monitored (due to stat problems) - aborting
[2026-04-30 14:36:13] 2026-04-30 18:35:41,618 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7120562731/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,860 | INFO     | 
[2026-04-30 14:36:13] 2026-04-30 18:35:41,860 | INFO     | job summary report
[2026-04-30 14:36:13] 2026-04-30 18:35:41,860 | INFO     | --------------------------------------------------
[2026-04-30 14:36:13] 2026-04-30 18:35:41,860 | INFO     | PanDA job id: 7120562731
[2026-04-30 14:36:13] 2026-04-30 18:35:41,861 | INFO     | task id: 49820375
[2026-04-30 14:36:13] 2026-04-30 18:35:41,861 | INFO     | errors: (none)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,861 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 14:36:13] 2026-04-30 18:35:41,861 | INFO     | pilot state: finished 
[2026-04-30 14:36:13] 2026-04-30 18:35:41,862 | INFO     | transexitcode: 0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,862 | INFO     | exeerrorcode: 0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,862 | INFO     | exeerrordiag: 
[2026-04-30 14:36:13] 2026-04-30 18:35:41,862 | INFO     | exitcode: 0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,862 | INFO     | exitmsg: OK
[2026-04-30 14:36:13] 2026-04-30 18:35:41,863 | INFO     | cpuconsumptiontime: 129403 s
[2026-04-30 14:36:13] 2026-04-30 18:35:41,863 | INFO     | nevents: 400
[2026-04-30 14:36:13] 2026-04-30 18:35:41,863 | INFO     | neventsw: 0
[2026-04-30 14:36:13] 2026-04-30 18:35:41,863 | INFO     | pid: 45469
[2026-04-30 14:36:13] 2026-04-30 18:35:41,864 | INFO     | pgrp: 45469
[2026-04-30 14:36:13] 2026-04-30 18:35:41,864 | INFO     | corecount: 8
[2026-04-30 14:36:13] 2026-04-30 18:35:41,864 | INFO     | event service: False
[2026-04-30 14:36:13] 2026-04-30 18:35:41,864 | INFO     | sizes: {0: 2276536, 1: 2278365, 11: 2278365, 17111: 2310182, 17114: 2319236, 17115: 2319374}
[2026-04-30 14:36:13] 2026-04-30 18:35:41,864 | INFO     | --------------------------------------------------
[2026-04-30 14:36:13] 2026-04-30 18:35:41,865 | INFO     | 
[2026-04-30 14:36:13] 2026-04-30 18:35:41,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-04-30 14:36:13] 2026-04-30 18:35:41,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,883 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,884 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,884 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,884 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,885 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,885 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,885 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,885 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,885 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,886 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,886 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,886 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,886 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 14:36:13] 2026-04-30 18:35:41,887 | INFO     | job 7120562731 has completed (purged errors)
[2026-04-30 14:36:13] 2026-04-30 18:35:41,887 | INFO     | overall cleanup function is called
[2026-04-30 14:36:13] 2026-04-30 18:35:41,911 | INFO     | number of running child processes to parent process 45469: 1
[2026-04-30 14:36:13] 2026-04-30 18:35:41,912 | INFO     | maximum number of monitored processes: 6
[2026-04-30 14:36:13] 2026-04-30 18:35:41,912 | INFO     | aborting job monitoring since job object (job id=7120562731) has expired
[2026-04-30 14:36:13] 2026-04-30 18:35:42,899 | INFO     | --- collectZombieJob: --- 10, [45469]
[2026-04-30 14:36:13] 2026-04-30 18:35:42,899 | INFO     | zombie collector waiting for pid 45469
[2026-04-30 14:36:13] 2026-04-30 18:35:42,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 14:36:13] 2026-04-30 18:35:42,899 | INFO     | collected zombie processes
[2026-04-30 14:36:13] 2026-04-30 18:35:42,899 | INFO     | will attempt to kill all subprocesses of pid=45469
[2026-04-30 14:36:13] 2026-04-30 18:35:43,181 | INFO     | process IDs to be killed: [45469] (in reverse order)
[2026-04-30 14:36:13] 2026-04-30 18:35:43,273 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 14:36:13] 2026-04-30 18:35:43,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 14:36:13] 2026-04-30 18:35:43,287 | INFO     | did not find any defunct processes belonging to 45469
[2026-04-30 14:36:13] 2026-04-30 18:35:43,299 | INFO     | did not find any defunct processes belonging to 45469
[2026-04-30 14:36:13] 2026-04-30 18:35:43,300 | INFO     | Ready for new job
[2026-04-30 14:36:13] 2026-04-30 18:35:43,302 | INFO     | ***************************************
[2026-04-30 14:36:13] 2026-04-30 18:35:43,302 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 14:36:13] 2026-04-30 18:35:43,302 | INFO     | ***************************************
[2026-04-30 14:36:13] 2026-04-30 18:35:43,302 | INFO     | 
[2026-04-30 14:36:13] 2026-04-30 18:35:43,304 | INFO     | architecture information:
[2026-04-30 14:36:13] 2026-04-30 18:35:43,305 | INFO     | executing command: cat /etc/os-release
[2026-04-30 14:36:13] 2026-04-30 18:35:43,317 | INFO     | cat /etc/os-release:
[2026-04-30 14:36:13] NAME="CentOS Linux"
[2026-04-30 14:36:13] VERSION="7 (Core)"
[2026-04-30 14:36:13] ID="centos"
[2026-04-30 14:36:13] ID_LIKE="rhel fedora"
[2026-04-30 14:36:13] VERSION_ID="7"
[2026-04-30 14:36:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 14:36:13] ANSI_COLOR="0;31"
[2026-04-30 14:36:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 14:36:13] HOME_URL="https://www.centos.org/"
[2026-04-30 14:36:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 14:36:13] 
[2026-04-30 14:36:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 14:36:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 14:36:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 14:36:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 14:36:13] 
[2026-04-30 14:36:13] 2026-04-30 18:35:43,318 | INFO     | ***************************************
[2026-04-30 14:36:13] 2026-04-30 18:35:43,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-04-30 14:36:13] 2026-04-30 18:35:43,835 | INFO     | sufficient remaining disk space (46835695616 B)
[2026-04-30 14:36:13] 2026-04-30 18:35:43,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 14:36:13] 2026-04-30 18:35:43,835 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 14:36:13] 2026-04-30 18:35:43,836 | INFO     | update_server=False
[2026-04-30 14:36:13] 2026-04-30 18:35:43,836 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 14:36:13] 2026-04-30 18:35:43,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 14:36:13] 2026-04-30 18:35:43,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 14:36:13] 2026-04-30 18:35:43,837 | INFO     | aborting loop
[2026-04-30 14:36:13] 2026-04-30 18:35:44,065 | INFO     | all job control threads have been joined
[2026-04-30 14:36:13] 2026-04-30 18:35:44,270 | INFO     | [monitor] cgroup control has ended
[2026-04-30 14:36:13] 2026-04-30 18:35:44,467 | INFO     | all data control threads have been joined
[2026-04-30 14:36:13] 2026-04-30 18:35:44,841 | INFO     | [job] retrieve thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:44,842 | INFO     | [job] job monitor thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,071 | INFO     | [job] control thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,080 | INFO     | [data] copytool_in thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,166 | INFO     | all payload control threads have been joined
[2026-04-30 14:36:13] 2026-04-30 18:35:45,346 | INFO     | [job] validate thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,375 | INFO     | [payload] validate_post thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,407 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,471 | INFO     | [data] control thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,671 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,719 | INFO     | [payload] failed_post thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,750 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:45,841 | INFO     | [data] copytool_out thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:46,100 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:46,171 | INFO     | [payload] control thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:46,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 14:36:13] 2026-04-30 18:35:46,924 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 14:36:13] 2026-04-30 18:35:47,600 | INFO     | [job] queue monitor thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:50,931 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 14:36:13] 2026-04-30 18:35:51,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445477758784)>', '<ExcThread(monitor, started 140445120177920)>']
[2026-04-30 14:36:13] 2026-04-30 18:35:56,809 | INFO     | all workflow threads have been joined
[2026-04-30 14:36:13] 2026-04-30 18:35:56,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 14:36:13] 2026-04-30 18:35:56,809 | INFO     | traces error code: 0
[2026-04-30 14:36:13] 2026-04-30 18:35:56,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 14:36:13] 2026-04-30 18:36:13,391 | INFO     | PID=30857 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 14:36:13] 2026-04-30 18:36:13,392 | INFO     | .. there are 7 such processes running
[2026-04-30 14:36:13] 2026-04-30 18:36:13,394 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 14:36:13] 2026-04-30 18:36:13,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 14:36:13] 2026-04-30 18:36:13,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 14:36:13] 2026-04-30 18:36:13,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 14:36:13] 2026-04-30 18:36:13,394 | INFO     | [monitor] control thread has ended
[2026-04-30 14:36:13] 2026-04-30 18:36:13,513 [wrapper] ==== pilot stdout END ====
[2026-04-30 14:36:13] 2026-04-30 18:36:13,516 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 14:36:13] 2026-04-30 18:36:13,519 [wrapper] pilotpid: 30857
[2026-04-30 14:36:13] 2026-04-30 18:36:13,521 [wrapper] Pilot exit status: 0
[2026-04-30 14:36:13] 2026-04-30 18:36:13,532 [wrapper] pandaids: 7120562731 7120562731
[2026-04-30 14:36:13] 2026-04-30 18:36:13,591 [wrapper] cleanup supervisor_pilot  540275 30860
[2026-04-30 14:36:13] 2026-04-30 18:36:13,594 [wrapper] Test setup, not cleaning
[2026-04-30 14:36:13] 2026-04-30 18:36:13,597 [wrapper] apfmon messages muted
[2026-04-30 14:36:13] 2026-04-30 18:36:13,600 [wrapper] ==== wrapper stdout END ====
[2026-04-30 14:36:13] 2026-04-30 18:36:13,602 [wrapper] ==== wrapper stderr END ====
[2026-04-30 14:36:13]  *** Error codes and diagnostics ***
[2026-04-30 14:36:13]     "exeErrorCode": 0,
[2026-04-30 14:36:13]     "pilotErrorCode": 0,
[2026-04-30 14:36:13]  *** Listing of results directory ***
[2026-04-30 14:36:13] total 4658592
[2026-04-30 14:36:13] drwx------. 5 boincer umatlas       4096 Apr 22 05:13 pilot3
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas     683926 Apr 30 04:22 pilot3.tar.gz
[2026-04-30 14:36:13] -rwx------. 1 boincer umatlas      36322 Apr 30 04:44 runpilot2-wrapper.sh
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas       5631 Apr 30 04:48 queuedata.json
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas        100 Apr 30 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 14:36:13] -rwxr-xr-x. 1 boincer umatlas       7986 Apr 30 05:50 run_atlas
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas        105 Apr 30 05:50 job.xml
[2026-04-30 14:36:13] -rw-r--r--. 3 boincer umatlas 2245309719 Apr 30 05:51 EVNT.49820373._000060.pool.root.1
[2026-04-30 14:36:13] -rw-r--r--. 3 boincer umatlas 2245309719 Apr 30 05:51 ATLAS.root_0
[2026-04-30 14:36:13] -rw-r--r--. 2 boincer umatlas      15667 Apr 30 05:51 start_atlas.sh
[2026-04-30 14:36:13] drwxrwx--x. 2 boincer umatlas       4096 Apr 30 05:51 shared
[2026-04-30 14:36:13] -rw-r--r--. 2 boincer umatlas     697424 Apr 30 05:51 input.tar.gz
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas          0 Apr 30 05:51 boinc_lockfile
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas       2586 Apr 30 09:49 pandaJob.out
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas         57 Apr 30 09:49 setup.sh.local
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas     993700 Apr 30 09:50 agis_schedconf.cvmfs.json
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas        434 Apr 30 09:50 workernode_map.json
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas       6438 Apr 30 14:31 init_data.xml
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas  271471100 Apr 30 14:34 HITS.49820375._021371.pool.root.1
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas        490 Apr 30 14:34 boinc_task_state.xml
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas       1047 Apr 30 14:35 memory_monitor_summary.json
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas    1510091 Apr 30 14:35 agis_ddmendpoints.agis.ALL.json
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas     542977 Apr 30 14:35 log.49820375._021371.job.log.tgz.1
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas       6416 Apr 30 14:35 heartbeat_new.json
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas       6307 Apr 30 14:35 heartbeat.json
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas       8192 Apr 30 14:36 boinc_mmap_file
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas         29 Apr 30 14:36 wrapper_checkpoint.txt
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas         96 Apr 30 14:36 pilot_heartbeat.json
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas        820 Apr 30 14:36 pilotlog.txt
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas    1543624 Apr 30 14:36 log.49820375._021371.job.log.1
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas        357 Apr 30 14:36 output.list
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas        410 Apr 30 14:36 runtime_log
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas    2099200 Apr 30 14:36 result.tar.gz
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas       9045 Apr 30 14:36 runtime_log.err
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas        786 Apr 30 14:36 167de07e20d7.diag
[2026-04-30 14:36:13] -rw-r--r--. 1 boincer umatlas      23155 Apr 30 14:36 stderr.txt
[2026-04-30 14:36:13] HITS file was successfully produced:
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas 271471100 Apr 30 14:34 shared/HITS.pool.root.1
[2026-04-30 14:36:13]  *** Contents of shared directory: ***
[2026-04-30 14:36:13] total 2460560
[2026-04-30 14:36:13] -rw-r--r--. 3 boincer umatlas 2245309719 Apr 30 05:51 ATLAS.root_0
[2026-04-30 14:36:13] -rw-r--r--. 2 boincer umatlas      15667 Apr 30 05:51 start_atlas.sh
[2026-04-30 14:36:13] -rw-r--r--. 2 boincer umatlas     697424 Apr 30 05:51 input.tar.gz
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas  271471100 Apr 30 14:34 HITS.pool.root.1
[2026-04-30 14:36:13] -rw-------. 1 boincer umatlas    2099200 Apr 30 14:36 result.tar.gz
14:36:14 (3843): run_atlas exited; CPU time 130018.144533
14:36:14 (3843): called boinc_finish(0)

</stderr_txt>
]]>

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