Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:51:35 (335001): wrapper (7.7.26015): starting
03:51:35 (335001): wrapper: running run_atlas (--nthreads 4)
[2026-05-01 03:51:35] Arguments: --nthreads 4
[2026-05-01 03:51:35] Threads: 4
[2026-05-01 03:51:35] Checking for CVMFS
[2026-05-01 03:51:35] No cvmfs_config command found, will try listing directly
[2026-05-01 03:51:35] CVMFS is ok
[2026-05-01 03:51:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-01 03:51:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-01 03:51:35] Further information can be found at the LHC@home message board.
[2026-05-01 03:51:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-01 03:51:35] Checking for apptainer binary...
[2026-05-01 03:51:35] which: no apptainer in ((null))
[2026-05-01 03:51:35] apptainer is not installed, using version from CVMFS
[2026-05-01 03:51:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-01 03:51:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-05-01 03:51:36] apptainer works
[2026-05-01 03:51:36] Set ATHENA_PROC_NUMBER=4
[2026-05-01 03:51:36] Set ATHENA_CORE_NUMBER=4
[2026-05-01 03:51:36] Starting ATLAS job with PandaID=7120230026
[2026-05-01 03:51:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 09:05:44]  *** The last 200 lines of the pilot log: ***
[2026-05-01 09:05:44] 2026-05-01 07:04:44,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-01 09:05:44] 2026-05-01 07:04:45,798 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-05-01 09:05:44] 2026-05-01 07:04:46,475 | INFO     | job 7120230026 has state=finished
[2026-05-01 09:05:44] 2026-05-01 07:04:46,475 | INFO     | preparing for final server update for job 7120230026 in state='finished'
[2026-05-01 09:05:44] 2026-05-01 07:04:46,475 | INFO     | reading metadata from: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7120230026/jobReport.json
[2026-05-01 09:05:44] 2026-05-01 07:04:46,478 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot36/slots/0/workernode_map.json
[2026-05-01 09:05:44] 2026-05-01 07:04:46,478 | INFO     | this job has now completed (state=finished)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,478 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,479 | INFO     | log transfer has been attempted: DONE
[2026-05-01 09:05:44] 2026-05-01 07:04:46,479 | INFO     | job 7120230026 has finished - writing final server update
[2026-05-01 09:05:44] 2026-05-01 07:04:46,479 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3891972/.job.ad'
[2026-05-01 09:05:44] 2026-05-01 07:04:46,479 | INFO     | total number of processed events: 400 (read)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,492 | INFO     | using path: /var/lib/boinc/var/slot36/slots/0/PanDA_Pilot-7120230026/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,492 | INFO     | extracted standard info from prmon json
[2026-05-01 09:05:44] 2026-05-01 07:04:46,493 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 09:05:44] 2026-05-01 07:04:46,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 09:05:44] 2026-05-01 07:04:46,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 09:05:44] 2026-05-01 07:04:46,499 | INFO     | fitting pss+swap vs Time
[2026-05-01 09:05:44] 2026-05-01 07:04:46,499 | INFO     | sum of square deviations: 8971993338.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,507 | INFO     | sum of deviations: 45255856140.99999
[2026-05-01 09:05:44] 2026-05-01 07:04:46,507 | INFO     | mean x (centered): 0.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,507 | INFO     | mean y: 2336016.302931596
[2026-05-01 09:05:44] 2026-05-01 07:04:46,507 | INFO     | intersect: 2336016.302931596
[2026-05-01 09:05:44] 2026-05-01 07:04:46,508 | INFO     | chi2: 1.395703034946126
[2026-05-01 09:05:44] 2026-05-01 07:04:46,508 | INFO     | sum of square deviations: 8540720135.5
[2026-05-01 09:05:44] 2026-05-01 07:04:46,511 | INFO     | sum of deviations: 44223479148.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,511 | INFO     | mean x (centered): 0.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,511 | INFO     | mean y: 2335651.218543046
[2026-05-01 09:05:44] 2026-05-01 07:04:46,511 | INFO     | intersect: 2335651.218543046
[2026-05-01 09:05:44] 2026-05-01 07:04:46,511 | INFO     | chi2: 1.3960789623423528
[2026-05-01 09:05:44] 2026-05-01 07:04:46,512 | INFO     | current chi2=1.3960789623423528 (change=-0.02693462626463724 %)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,512 | INFO     | right removable region: 301
[2026-05-01 09:05:44] 2026-05-01 07:04:46,512 | INFO     | sum of square deviations: 8540720135.5
[2026-05-01 09:05:44] 2026-05-01 07:04:46,515 | INFO     | sum of deviations: 3400179985.4999976
[2026-05-01 09:05:44] 2026-05-01 07:04:46,515 | INFO     | mean x (centered): 0.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,515 | INFO     | mean y: 2350698.6854304634
[2026-05-01 09:05:44] 2026-05-01 07:04:46,515 | INFO     | intersect: 2350698.6854304634
[2026-05-01 09:05:44] 2026-05-01 07:04:46,515 | INFO     | chi2: 0.01932281241273025
[2026-05-01 09:05:44] 2026-05-01 07:04:46,516 | INFO     | current chi2=0.01932281241273025 (change=98.61554987494341 %)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,516 | INFO     | sum of square deviations: 8123493708.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,518 | INFO     | sum of deviations: 3364404247.999999
[2026-05-01 09:05:44] 2026-05-01 07:04:46,519 | INFO     | mean x (centered): 0.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,519 | INFO     | mean y: 2350702.272727273
[2026-05-01 09:05:44] 2026-05-01 07:04:46,519 | INFO     | intersect: 2350702.272727273
[2026-05-01 09:05:44] 2026-05-01 07:04:46,519 | INFO     | chi2: 0.01528965715846883
[2026-05-01 09:05:44] 2026-05-01 07:04:46,523 | INFO     | current chi2=0.01528965715846883 (change=20.872506383202783 %)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,524 | INFO     | left removable region: 10
[2026-05-01 09:05:44] 2026-05-01 07:04:46,524 | INFO     | sum of square deviations: 7641036290.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,526 | INFO     | sum of deviations: 2964070397.999999
[2026-05-01 09:05:44] 2026-05-01 07:04:46,527 | INFO     | mean x (centered): 0.0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,527 | INFO     | mean y: 2350550.402061856
[2026-05-01 09:05:44] 2026-05-01 07:04:46,527 | INFO     | intersect: 2350550.402061856
[2026-05-01 09:05:44] 2026-05-01 07:04:46,527 | INFO     | chi2: 0.015271746563477035
[2026-05-01 09:05:44] 2026-05-01 07:04:46,527 | INFO     | current memory leak: 0.39 B/s (using 291 data points, chi2=0.02)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,528 | INFO     | could have reported an average CPU frequency of 2510 MHz (14 samples)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,528 | INFO     | ..............................
[2026-05-01 09:05:44] 2026-05-01 07:04:46,528 | INFO     | . Timing measurements:
[2026-05-01 09:05:44] 2026-05-01 07:04:46,528 | INFO     | . get job = 0 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . initial setup = 9 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . payload setup = 14 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . stage-in = 0 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . payload execution = 18726 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . stage-out = 1 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | . log creation = 0 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,529 | INFO     | ..............................
[2026-05-01 09:05:44] 2026-05-01 07:04:46,635 | INFO     | 
[2026-05-01 09:05:44] 2026-05-01 07:04:46,635 | INFO     | job summary report
[2026-05-01 09:05:44] 2026-05-01 07:04:46,635 | INFO     | --------------------------------------------------
[2026-05-01 09:05:44] 2026-05-01 07:04:46,635 | INFO     | PanDA job id: 7120230026
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | task id: 49863851
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | errors: (none)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | pilot state: finished 
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | transexitcode: 0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | exeerrorcode: 0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | exeerrordiag: 
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | exitcode: 0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | exitmsg: OK
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | cpuconsumptiontime: 69535 s
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | nevents: 400
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | neventsw: 0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,636 | INFO     | pid: 344003
[2026-05-01 09:05:44] 2026-05-01 07:04:46,637 | INFO     | pgrp: 344003
[2026-05-01 09:05:44] 2026-05-01 07:04:46,637 | INFO     | corecount: 4
[2026-05-01 09:05:44] 2026-05-01 07:04:46,637 | INFO     | event service: False
[2026-05-01 09:05:44] 2026-05-01 07:04:46,637 | INFO     | sizes: {0: 2276564, 1: 2278449, 12: 2278449, 18744: 2310920, 18745: 2310919, 18747: 2319995, 18749: 2320179, 18750: 2320373}
[2026-05-01 09:05:44] 2026-05-01 07:04:46,638 | INFO     | --------------------------------------------------
[2026-05-01 09:05:44] 2026-05-01 07:04:46,638 | INFO     | 
[2026-05-01 09:05:44] 2026-05-01 07:04:46,638 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot36/slots/0
[2026-05-01 09:05:44] 2026-05-01 07:04:46,663 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,663 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,663 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,663 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,663 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,664 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,665 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,665 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 09:05:44] 2026-05-01 07:04:46,665 | INFO     | job 7120230026 has completed (purged errors)
[2026-05-01 09:05:44] 2026-05-01 07:04:46,665 | INFO     | overall cleanup function is called
[2026-05-01 09:05:44] 2026-05-01 07:04:47,676 | INFO     | --- collectZombieJob: --- 10, [344003]
[2026-05-01 09:05:44] 2026-05-01 07:04:47,677 | INFO     | zombie collector waiting for pid 344003
[2026-05-01 09:05:44] 2026-05-01 07:04:47,677 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 09:05:44] 2026-05-01 07:04:47,677 | INFO     | collected zombie processes
[2026-05-01 09:05:44] 2026-05-01 07:04:47,677 | INFO     | will attempt to kill all subprocesses of pid=344003
[2026-05-01 09:05:44] 2026-05-01 07:04:47,984 | INFO     | process IDs to be killed: [344003] (in reverse order)
[2026-05-01 09:05:44] 2026-05-01 07:04:48,153 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 09:05:44] 2026-05-01 07:04:48,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 09:05:44] 2026-05-01 07:04:48,166 | INFO     | did not find any defunct processes belonging to 344003
[2026-05-01 09:05:44] 2026-05-01 07:04:48,177 | INFO     | did not find any defunct processes belonging to 344003
[2026-05-01 09:05:44] 2026-05-01 07:04:48,178 | INFO     | Ready for new job
[2026-05-01 09:05:44] 2026-05-01 07:04:48,180 | INFO     | ***************************************
[2026-05-01 09:05:44] 2026-05-01 07:04:48,180 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 09:05:44] 2026-05-01 07:04:48,180 | INFO     | ***************************************
[2026-05-01 09:05:44] 2026-05-01 07:04:48,180 | INFO     | 
[2026-05-01 09:05:44] 2026-05-01 07:04:48,184 | INFO     | architecture information:
[2026-05-01 09:05:44] 2026-05-01 07:04:48,184 | INFO     | executing command: cat /etc/os-release
[2026-05-01 09:05:44] 2026-05-01 07:04:48,207 | INFO     | cat /etc/os-release:
[2026-05-01 09:05:44] NAME="CentOS Linux"
[2026-05-01 09:05:44] VERSION="7 (Core)"
[2026-05-01 09:05:44] ID="centos"
[2026-05-01 09:05:44] ID_LIKE="rhel fedora"
[2026-05-01 09:05:44] VERSION_ID="7"
[2026-05-01 09:05:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 09:05:44] ANSI_COLOR="0;31"
[2026-05-01 09:05:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 09:05:44] HOME_URL="https://www.centos.org/"
[2026-05-01 09:05:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 09:05:44] 
[2026-05-01 09:05:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 09:05:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 09:05:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 09:05:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 09:05:44] 
[2026-05-01 09:05:44] 2026-05-01 07:04:48,207 | INFO     | ***************************************
[2026-05-01 09:05:44] 2026-05-01 07:04:48,710 | INFO     | executing command: df -mP /var/lib/boinc/var/slot36/slots/0
[2026-05-01 09:05:44] 2026-05-01 07:04:48,727 | INFO     | sufficient remaining disk space (27881635840 B)
[2026-05-01 09:05:44] 2026-05-01 07:04:48,727 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 09:05:44] 2026-05-01 07:04:48,728 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 09:05:44] 2026-05-01 07:04:48,728 | INFO     | update_server=False
[2026-05-01 09:05:44] 2026-05-01 07:04:48,728 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 09:05:44] 2026-05-01 07:04:48,728 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:05:44] 2026-05-01 07:04:48,728 | INFO     | aborting loop
[2026-05-01 09:05:44] 2026-05-01 07:04:48,897 | INFO     | all payload control threads have been joined
[2026-05-01 09:05:44] 2026-05-01 07:04:49,056 | INFO     | all data control threads have been joined
[2026-05-01 09:05:44] 2026-05-01 07:04:49,733 | INFO     | [job] retrieve thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:49,734 | INFO     | [job] job monitor thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:49,859 | INFO     | all job control threads have been joined
[2026-05-01 09:05:44] 2026-05-01 07:04:49,903 | INFO     | [payload] control thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:49,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 09:05:44] 2026-05-01 07:04:50,057 | INFO     | [payload] failed_post thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,062 | INFO     | [data] control thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,107 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,228 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,645 | INFO     | [job] validate thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,730 | INFO     | [payload] validate_post thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,865 | INFO     | [job] control thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:50,906 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:51,135 | INFO     | [data] copytool_in thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:51,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 09:05:44] 2026-05-01 07:04:51,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 09:05:44] 2026-05-01 07:04:51,940 | INFO     | [data] copytool_out thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:52,650 | INFO     | [job] queue monitor thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:55,917 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:04:59,759 | INFO     | job.realtimelogging is not enabled
[2026-05-01 09:05:44] 2026-05-01 07:05:00,764 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 09:05:44] 2026-05-01 07:05:18,444 | INFO     | PID=339132 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-05-01 09:05:44] 2026-05-01 07:05:18,445 | INFO     | .. there are 15 such processes running
[2026-05-01 09:05:44] 2026-05-01 07:05:18,445 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 09:05:44] 2026-05-01 07:05:18,445 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 09:05:44] 2026-05-01 07:05:18,445 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 09:05:44] 2026-05-01 07:05:36,340 | INFO     | [monitor] cgroup control has ended
[2026-05-01 09:05:44] 2026-05-01 07:05:38,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22377777235776)>', '<ExcThread(monitor, started 22377546405632)>']
[2026-05-01 09:05:44] 2026-05-01 07:05:38,547 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 09:05:44] 2026-05-01 07:05:38,548 | INFO     | [monitor] control thread has ended
[2026-05-01 09:05:44] 2026-05-01 07:05:43,405 | INFO     | all workflow threads have been joined
[2026-05-01 09:05:44] 2026-05-01 07:05:43,406 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 09:05:44] 2026-05-01 07:05:43,406 | INFO     | traces error code: 0
[2026-05-01 09:05:44] 2026-05-01 07:05:43,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 09:05:44] 2026-05-01 07:05:43,591 [wrapper] ==== pilot stdout END ====
[2026-05-01 09:05:44] 2026-05-01 07:05:43,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 09:05:44] 2026-05-01 07:05:43,598 [wrapper] pilotpid: 339132
[2026-05-01 09:05:44] 2026-05-01 07:05:43,605 [wrapper] Pilot exit status: 0
[2026-05-01 09:05:44] 2026-05-01 07:05:43,705 [wrapper] pandaids: 7120230026
[2026-05-01 09:05:44] 2026-05-01 07:05:43,797 [wrapper] cleanup supervisor_pilot  730050 339133
[2026-05-01 09:05:44] 2026-05-01 07:05:43,804 [wrapper] Test setup, not cleaning
[2026-05-01 09:05:44] 2026-05-01 07:05:43,811 [wrapper] apfmon messages muted
[2026-05-01 09:05:44] 2026-05-01 07:05:43,821 [wrapper] ==== wrapper stdout END ====
[2026-05-01 09:05:44] 2026-05-01 07:05:43,860 [wrapper] ==== wrapper stderr END ====
[2026-05-01 09:05:44]  *** Error codes and diagnostics ***
[2026-05-01 09:05:44]     "exeErrorCode": 0,
[2026-05-01 09:05:44]     "pilotErrorCode": 0,
[2026-05-01 09:05:44]  *** Listing of results directory ***
[2026-05-01 09:05:44] total 473484
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-05-01 09:05:44] -rwx------. 1 boinc boinc     36322 Apr 30 10:43 runpilot2-wrapper.sh
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:46 queuedata.json
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc       100 May  1 03:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 09:05:44] -rwxr-xr-x. 1 boinc boinc      7986 May  1 03:51 run_atlas
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc       105 May  1 03:51 job.xml
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc 257865796 May  1 03:51 EVNT.49863848._000203.pool.root.1
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc      6483 May  1 03:51 init_data.xml
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc     15667 May  1 03:51 start_atlas.sh
[2026-05-01 09:05:44] drwxrwx--x. 2 boinc boinc      4096 May  1 03:51 shared
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc    697440 May  1 03:51 input.tar.gz
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc         0 May  1 03:51 boinc_lockfile
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc      2650 May  1 03:51 pandaJob.out
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc   1001806 May  1 03:51 agis_schedconf.cvmfs.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc       448 May  1 03:52 workernode_map.json
[2026-05-01 09:05:44] drwx------. 5 boinc boinc      4096 May  1 03:52 pilot3
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc 218643054 May  1 09:03 HITS.49863851._005512.pool.root.1
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc       488 May  1 09:04 boinc_task_state.xml
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc        95 May  1 09:04 pilot_heartbeat.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc      1035 May  1 09:04 memory_monitor_summary.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc   1510091 May  1 09:04 agis_ddmendpoints.agis.ALL.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc    380764 May  1 09:04 log.49863851._005512.job.log.tgz.1
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc      6419 May  1 09:04 heartbeat_new.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc      6310 May  1 09:04 heartbeat.json
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc      4903 May  1 09:05 pilotlog.txt
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc      8192 May  1 09:05 boinc_mmap_file
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc   1717808 May  1 09:05 log.49863851._005512.job.log.1
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc        28 May  1 09:05 wrapper_checkpoint.txt
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc       357 May  1 09:05 output.list
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc       410 May  1 09:05 runtime_log
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc   2119680 May  1 09:05 result.tar.gz
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc      8828 May  1 09:05 runtime_log.err
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc       665 May  1 09:05 164c2fef069a.diag
[2026-05-01 09:05:44] -rw-r--r--. 1 boinc boinc     21083 May  1 09:05 stderr.txt
[2026-05-01 09:05:44] HITS file was successfully produced:
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc 218643054 May  1 09:03 shared/HITS.pool.root.1
[2026-05-01 09:05:44]  *** Contents of shared directory: ***
[2026-05-01 09:05:44] total 468124
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc 257865796 May  1 03:51 ATLAS.root_0
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc     15667 May  1 03:51 start_atlas.sh
[2026-05-01 09:05:44] -rw-r--r--. 2 boinc boinc    697440 May  1 03:51 input.tar.gz
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc 218643054 May  1 09:03 HITS.pool.root.1
[2026-05-01 09:05:44] -rw-------. 1 boinc boinc   2119680 May  1 09:05 result.tar.gz
09:05:45 (335001): run_atlas exited; CPU time 70204.535806
09:05:45 (335001): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN