Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:09 (4383): wrapper (7.7.26015): starting
23:34:09 (4383): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 23:34:09] Arguments: --nthreads 8
[2026-04-30 23:34:09] Threads: 8
[2026-04-30 23:34:09] Checking for CVMFS
[2026-04-30 23:34:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 23:34:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 23:34:13] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 23:34:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 23:34:14] 2.11.2.0 26242 21855 100964 159066 0 53 22441484 25165824 96 130560 0 7250299 99.859 6231491 9374 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 23:34:14] CVMFS is ok
[2026-04-30 23:34:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 23:34:14] Checking for apptainer binary...
[2026-04-30 23:34:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 23:34:14] Running /usr/bin/apptainer --version
[2026-04-30 23:34:14] apptainer version 1.3.2-1.el7
[2026-04-30 23:34:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 23:34:30] cg-vwn414.simple-grid.lan
[2026-04-30 23:34:30] apptainer works
[2026-04-30 23:34:30] Set ATHENA_PROC_NUMBER=8
[2026-04-30 23:34:30] Set ATHENA_CORE_NUMBER=8
[2026-04-30 23:34:30] Starting ATLAS job with PandaID=7120349026
[2026-04-30 23:34:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-01 04:55:56]  *** The last 200 lines of the pilot log: ***
[2026-05-01 04:55:56] 2026-05-01 02:54:46,176 | INFO     | this job has now completed (state=finished)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,176 | INFO     | log transfer has been attempted: DONE
[2026-05-01 04:55:56] 2026-05-01 02:54:46,176 | INFO     | job 7120349026 has finished - writing final server update
[2026-05-01 04:55:56] 2026-05-01 02:54:46,177 | INFO     | total number of processed events: 400 (read)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,179 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-7120349026/memory_monitor_summary.json (trf name=prmon)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,179 | INFO     | extracted standard info from prmon json
[2026-05-01 04:55:56] 2026-05-01 02:54:46,179 | INFO     | extracted standard memory fields from prmon json
[2026-05-01 04:55:56] 2026-05-01 02:54:46,180 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-01 04:55:56] 2026-05-01 02:54:46,180 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-01 04:55:56] 2026-05-01 02:54:46,186 | INFO     | fitting pss+swap vs Time
[2026-05-01 04:55:56] 2026-05-01 02:54:46,187 | INFO     | sum of square deviations: 8456158550.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,190 | INFO     | sum of deviations: 192524433798.99997
[2026-05-01 04:55:56] 2026-05-01 02:54:46,191 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,191 | INFO     | mean y: 2434515.2325581396
[2026-05-01 04:55:56] 2026-05-01 02:54:46,191 | INFO     | intersect: 2434515.2325581396
[2026-05-01 04:55:56] 2026-05-01 02:54:46,192 | INFO     | chi2: 8.855736480050165
[2026-05-01 04:55:56] 2026-05-01 02:54:46,192 | INFO     | sum of square deviations: 8041713570.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,195 | INFO     | sum of deviations: 209067822166.99997
[2026-05-01 04:55:56] 2026-05-01 02:54:46,195 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,196 | INFO     | mean y: 2440502.756756757
[2026-05-01 04:55:56] 2026-05-01 02:54:46,196 | INFO     | intersect: 2440502.756756757
[2026-05-01 04:55:56] 2026-05-01 02:54:46,196 | INFO     | chi2: 8.138706915046463
[2026-05-01 04:55:56] 2026-05-01 02:54:46,196 | INFO     | current chi2=8.138706915046463 (change=8.096780732116375 %)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,196 | INFO     | right removable region: 295
[2026-05-01 04:55:56] 2026-05-01 02:54:46,197 | INFO     | sum of square deviations: 8041713570.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,200 | INFO     | sum of deviations: 84748843727.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,200 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,200 | INFO     | mean y: 2474159.256756757
[2026-05-01 04:55:56] 2026-05-01 02:54:46,200 | INFO     | intersect: 2474159.256756757
[2026-05-01 04:55:56] 2026-05-01 02:54:46,201 | INFO     | chi2: 3.6561100924553083
[2026-05-01 04:55:56] 2026-05-01 02:54:46,201 | INFO     | current chi2=3.6561100924553083 (change=58.714782212731365 %)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,202 | INFO     | sum of square deviations: 7641036290.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,205 | INFO     | sum of deviations: 3557786936.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,205 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,205 | INFO     | mean y: 2505029.821305842
[2026-05-01 04:55:56] 2026-05-01 02:54:46,205 | INFO     | intersect: 2505029.821305842
[2026-05-01 04:55:56] 2026-05-01 02:54:46,206 | INFO     | chi2: 0.9111961217787875
[2026-05-01 04:55:56] 2026-05-01 02:54:46,206 | INFO     | current chi2=0.9111961217787875 (change=75.0774429998944 %)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,206 | INFO     | sum of square deviations: 7253894147.5
[2026-05-01 04:55:56] 2026-05-01 02:54:46,209 | INFO     | sum of deviations: -9732168475.5
[2026-05-01 04:55:56] 2026-05-01 02:54:46,209 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,210 | INFO     | mean y: 2510232.465034965
[2026-05-01 04:55:56] 2026-05-01 02:54:46,210 | INFO     | intersect: 2510232.465034965
[2026-05-01 04:55:56] 2026-05-01 02:54:46,210 | INFO     | chi2: 0.811940252647229
[2026-05-01 04:55:56] 2026-05-01 02:54:46,210 | INFO     | current chi2=0.811940252647229 (change=10.892920498585593 %)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,210 | INFO     | left removable region: 15
[2026-05-01 04:55:56] 2026-05-01 02:54:46,211 | INFO     | sum of square deviations: 6806862510.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,214 | INFO     | sum of deviations: 9230974724.5
[2026-05-01 04:55:56] 2026-05-01 02:54:46,214 | INFO     | mean x (centered): 0.0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,214 | INFO     | mean y: 2517856.9607142857
[2026-05-01 04:55:56] 2026-05-01 02:54:46,214 | INFO     | intersect: 2517856.9607142857
[2026-05-01 04:55:56] 2026-05-01 02:54:46,215 | INFO     | chi2: 0.019458501383581246
[2026-05-01 04:55:56] 2026-05-01 02:54:46,215 | INFO     | current memory leak: 1.36 B/s (using 280 data points, chi2=0.02)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | ..............................
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | . Timing measurements:
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | . get job = 0 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | . initial setup = 115 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | . payload setup = 310 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,216 | INFO     | . stage-in = 0 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,217 | INFO     | . payload execution = 18479 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,217 | INFO     | . stage-out = 3 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,217 | INFO     | . log creation = 1 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,217 | INFO     | ..............................
[2026-05-01 04:55:56] 2026-05-01 02:54:46,338 | INFO     | 
[2026-05-01 04:55:56] 2026-05-01 02:54:46,338 | INFO     | job summary report
[2026-05-01 04:55:56] 2026-05-01 02:54:46,338 | INFO     | --------------------------------------------------
[2026-05-01 04:55:56] 2026-05-01 02:54:46,338 | INFO     | PanDA job id: 7120349026
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | task id: 49863733
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | errors: (none)
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | pilot state: finished 
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | transexitcode: 0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | exeerrorcode: 0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | exeerrordiag: 
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | exitcode: 0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,339 | INFO     | exitmsg: OK
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | cpuconsumptiontime: 69996 s
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | nevents: 400
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | neventsw: 0
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | pid: 12837
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | pgrp: 12837
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | corecount: 8
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | event service: False
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | sizes: {0: 2276477, 1: 2276934, 2: 2278390, 12: 2278390, 18794: 2310899, 18795: 2310898, 18799: 2320080, 18800: 2320136, 18801: 2320330}
[2026-05-01 04:55:56] 2026-05-01 02:54:46,340 | INFO     | --------------------------------------------------
[2026-05-01 04:55:56] 2026-05-01 02:54:46,341 | INFO     | 
[2026-05-01 04:55:56] 2026-05-01 02:54:46,341 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-05-01 04:55:56] 2026-05-01 02:54:47,079 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,082 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-01 04:55:56] 2026-05-01 02:54:47,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,082 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-01 04:55:56] 2026-05-01 02:54:47,082 | INFO     | job 7120349026 has completed (purged errors)
[2026-05-01 04:55:56] 2026-05-01 02:54:47,082 | INFO     | overall cleanup function is called
[2026-05-01 04:55:56] 2026-05-01 02:54:48,091 | INFO     | --- collectZombieJob: --- 10, [12837]
[2026-05-01 04:55:56] 2026-05-01 02:54:48,091 | INFO     | zombie collector waiting for pid 12837
[2026-05-01 04:55:56] 2026-05-01 02:54:48,091 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-01 04:55:56] 2026-05-01 02:54:48,092 | INFO     | collected zombie processes
[2026-05-01 04:55:56] 2026-05-01 02:54:48,092 | INFO     | will attempt to kill all subprocesses of pid=12837
[2026-05-01 04:55:56] 2026-05-01 02:54:48,148 | INFO     | process IDs to be killed: [12837] (in reverse order)
[2026-05-01 04:55:56] 2026-05-01 02:54:48,957 | WARNING  | found no corresponding commands to process id(s)
[2026-05-01 04:55:56] 2026-05-01 02:54:48,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-01 04:55:56] 2026-05-01 02:54:48,960 | INFO     | did not find any defunct processes belonging to 12837
[2026-05-01 04:55:56] 2026-05-01 02:54:48,961 | INFO     | did not find any defunct processes belonging to 12837
[2026-05-01 04:55:56] 2026-05-01 02:54:48,962 | INFO     | Ready for new job
[2026-05-01 04:55:56] 2026-05-01 02:54:48,964 | INFO     | ***************************************
[2026-05-01 04:55:56] 2026-05-01 02:54:48,964 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-01 04:55:56] 2026-05-01 02:54:48,964 | INFO     | ***************************************
[2026-05-01 04:55:56] 2026-05-01 02:54:48,964 | INFO     | 
[2026-05-01 04:55:56] 2026-05-01 02:54:48,965 | INFO     | pilot is running in a VM
[2026-05-01 04:55:56] 2026-05-01 02:54:48,965 | INFO     | architecture information:
[2026-05-01 04:55:56] 2026-05-01 02:54:48,983 | INFO     | executing command: cat /etc/os-release
[2026-05-01 04:55:56] 2026-05-01 02:54:49,288 | INFO     | cat /etc/os-release:
[2026-05-01 04:55:56] NAME="CentOS Linux"
[2026-05-01 04:55:56] VERSION="7 (Core)"
[2026-05-01 04:55:56] ID="centos"
[2026-05-01 04:55:56] ID_LIKE="rhel fedora"
[2026-05-01 04:55:56] VERSION_ID="7"
[2026-05-01 04:55:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-01 04:55:56] ANSI_COLOR="0;31"
[2026-05-01 04:55:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-01 04:55:56] HOME_URL="https://www.centos.org/"
[2026-05-01 04:55:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-01 04:55:56] 
[2026-05-01 04:55:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-01 04:55:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-01 04:55:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-01 04:55:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-01 04:55:56] 
[2026-05-01 04:55:56] 2026-05-01 02:54:49,289 | INFO     | ***************************************
[2026-05-01 04:55:56] 2026-05-01 02:54:49,792 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-05-01 04:55:56] 2026-05-01 02:54:49,978 | INFO     | sufficient remaining disk space (496218669056 B)
[2026-05-01 04:55:56] 2026-05-01 02:54:49,979 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-01 04:55:56] 2026-05-01 02:54:49,979 | INFO     | current server update state: UPDATING_FINAL
[2026-05-01 04:55:56] 2026-05-01 02:54:49,979 | INFO     | update_server=False
[2026-05-01 04:55:56] 2026-05-01 02:54:49,979 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-01 04:55:56] 2026-05-01 02:54:49,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-01 04:55:56] 2026-05-01 02:54:49,987 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-01 04:55:56] 2026-05-01 02:54:49,987 | INFO     | aborting loop
[2026-05-01 04:55:56] 2026-05-01 02:54:50,002 | INFO     | all payload control threads have been joined
[2026-05-01 04:55:56] 2026-05-01 02:54:50,607 | INFO     | all data control threads have been joined
[2026-05-01 04:55:56] 2026-05-01 02:54:50,794 | INFO     | all job control threads have been joined
[2026-05-01 04:55:56] 2026-05-01 02:54:50,985 | INFO     | [job] retrieve thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:50,993 | INFO     | [job] job monitor thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:50,999 | INFO     | [payload] validate_pre thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,008 | INFO     | [payload] control thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,054 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-01 04:55:56] 2026-05-01 02:54:51,173 | INFO     | [payload] failed_post thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-01 04:55:56] 2026-05-01 02:54:51,461 | INFO     | [job] create_data_payload thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,580 | INFO     | [job] validate thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,613 | INFO     | [data] control thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,800 | INFO     | [job] control thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:51,990 | INFO     | [data] copytool_out thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:52,093 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:52,359 | INFO     | [job] queue monitor thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:52,370 | INFO     | [payload] validate_post thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:52,429 | INFO     | [payload] execute_payloads thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:52,452 | INFO     | [data] copytool_in thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:54:55,063 | INFO     | [data] queue_monitor thread has finished
[2026-05-01 04:55:56] 2026-05-01 02:55:19,564 | INFO     | PID=8359 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-05-01 04:55:56] 2026-05-01 02:55:19,564 | INFO     | .. there are 2 such processes running
[2026-05-01 04:55:56] 2026-05-01 02:55:19,564 | INFO     | found 0 job(s) in 20 queues
[2026-05-01 04:55:56] 2026-05-01 02:55:19,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-01 04:55:56] 2026-05-01 02:55:19,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-01 04:55:56] 2026-05-01 02:55:44,628 | INFO     | [monitor] cgroup control has ended
[2026-05-01 04:55:56] 2026-05-01 02:55:46,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140309436606272)>', '<ExcThread(monitor, started 140308620748544)>']
[2026-05-01 04:55:56] 2026-05-01 02:55:46,725 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-01 04:55:56] 2026-05-01 02:55:46,725 | INFO     | [monitor] control thread has ended
[2026-05-01 04:55:56] 2026-05-01 02:55:51,668 | INFO     | all workflow threads have been joined
[2026-05-01 04:55:56] 2026-05-01 02:55:51,668 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-01 04:55:56] 2026-05-01 02:55:51,668 | INFO     | traces error code: 0
[2026-05-01 04:55:56] 2026-05-01 02:55:51,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-01 04:55:56] 2026-05-01 02:55:52,107 [wrapper] ==== pilot stdout END ====
[2026-05-01 04:55:56] 2026-05-01 02:55:52,219 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-01 04:55:56] 2026-05-01 02:55:52,315 [wrapper] pilotpid: 8359
[2026-05-01 04:55:56] 2026-05-01 02:55:52,412 [wrapper] Pilot exit status: 0
[2026-05-01 04:55:56] 2026-05-01 02:55:52,963 [wrapper] pandaids: 7120349026
[2026-05-01 04:55:56] 2026-05-01 02:55:54,155 [wrapper] cleanup supervisor_pilot 20643 8360
[2026-05-01 04:55:56] 2026-05-01 02:55:54,267 [wrapper] Test setup, not cleaning
[2026-05-01 04:55:56] 2026-05-01 02:55:54,376 [wrapper] apfmon messages muted
[2026-05-01 04:55:56] 2026-05-01 02:55:54,460 [wrapper] ==== wrapper stdout END ====
[2026-05-01 04:55:56] 2026-05-01 02:55:54,559 [wrapper] ==== wrapper stderr END ====
[2026-05-01 04:55:56]  *** Error codes and diagnostics ***
[2026-05-01 04:55:56]     "exeErrorCode": 0,
[2026-05-01 04:55:56]     "pilotErrorCode": 0,
[2026-05-01 04:55:56]  *** Listing of results directory ***
[2026-05-01 04:55:56] total 458308
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-05-01 04:55:56] -rwx------. 1 boinc boinc     36322 Apr 30 10:43 runpilot2-wrapper.sh
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:46 queuedata.json
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc       100 Apr 30 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-01 04:55:56] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 23:34 run_atlas
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc       105 Apr 30 23:34 job.xml
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc      6307 Apr 30 23:34 init_data.xml
[2026-05-01 04:55:56] -rw-r--r--. 2 boinc boinc 259104928 Apr 30 23:34 EVNT.49863730._000060.pool.root.1
[2026-05-01 04:55:56] -rw-r--r--. 2 boinc boinc     15667 Apr 30 23:34 start_atlas.sh
[2026-05-01 04:55:56] drwxrwx--x. 2 boinc boinc        68 Apr 30 23:34 shared
[2026-05-01 04:55:56] -rw-r--r--. 2 boinc boinc    697419 Apr 30 23:34 input.tar.gz
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc         0 Apr 30 23:34 boinc_lockfile
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc      2575 Apr 30 23:34 pandaJob.out
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc       415 Apr 30 23:41 workernode_map.json
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc    997566 Apr 30 23:41 agis_schedconf.cvmfs.json
[2026-05-01 04:55:56] drwx------. 5 boinc boinc      4096 Apr 30 23:41 pilot3
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc 201691653 May  1 04:53 HITS.49863733._004594.pool.root.1
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc       489 May  1 04:53 boinc_task_state.xml
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc      1012 May  1 04:54 memory_monitor_summary.json
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc   1510091 May  1 04:54 agis_ddmendpoints.agis.ALL.json
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc    453359 May  1 04:54 log.49863733._004594.job.log.tgz.1
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc      6333 May  1 04:54 heartbeat_new.json
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc      6224 May  1 04:54 heartbeat.json
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc        95 May  1 04:54 pilot_heartbeat.json
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc      8192 May  1 04:55 boinc_mmap_file
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc        28 May  1 04:55 wrapper_checkpoint.txt
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc      4882 May  1 04:55 pilotlog.txt
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc   1741846 May  1 04:55 log.49863733._004594.job.log.1
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc       357 May  1 04:55 output.list
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc       410 May  1 04:55 runtime_log
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc   2211840 May  1 04:55 result.tar.gz
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc      8439 May  1 04:55 runtime_log.err
[2026-05-01 04:55:56] -rw-------. 1 boinc boinc       655 May  1 04:55 1641b5d3fdc5.diag
[2026-05-01 04:55:56] -rw-r--r--. 1 boinc boinc     20636 May  1 04:55 stderr.txt
[2026-05-01 04:55:57] HITS file was successfully produced:
[2026-05-01 04:55:57] -rw-------. 1 boinc boinc 201691653 May  1 04:53 shared/HITS.pool.root.1
[2026-05-01 04:55:57]  *** Contents of shared directory: ***
[2026-05-01 04:55:57] total 452864
[2026-05-01 04:55:57] -rw-r--r--. 2 boinc boinc 259104928 Apr 30 23:34 ATLAS.root_0
[2026-05-01 04:55:57] -rw-r--r--. 2 boinc boinc     15667 Apr 30 23:34 start_atlas.sh
[2026-05-01 04:55:57] -rw-r--r--. 2 boinc boinc    697419 Apr 30 23:34 input.tar.gz
[2026-05-01 04:55:57] -rw-------. 1 boinc boinc 201691653 May  1 04:53 HITS.pool.root.1
[2026-05-01 04:55:57] -rw-------. 1 boinc boinc   2211840 May  1 04:55 result.tar.gz
04:55:58 (4383): run_atlas exited; CPU time 70180.639448
04:55:58 (4383): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN