Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:28:04 (2395856): wrapper (7.7.26015): starting
20:28:04 (2395856): wrapper: running run_atlas (--nthreads 4)
[2026-05-02 20:28:04] Arguments: --nthreads 4
[2026-05-02 20:28:04] Threads: 4
[2026-05-02 20:28:04] Checking for CVMFS
[2026-05-02 20:28:04] No cvmfs_config command found, will try listing directly
[2026-05-02 20:28:04] CVMFS is ok
[2026-05-02 20:28:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-02 20:28:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-02 20:28:04] Further information can be found at the LHC@home message board.
[2026-05-02 20:28:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-02 20:28:04] Checking for apptainer binary...
[2026-05-02 20:28:04] which: no apptainer in ((null))
[2026-05-02 20:28:04] apptainer is not installed, using version from CVMFS
[2026-05-02 20:28:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-02 20:28:05] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-05-02 20:28:05] apptainer works
[2026-05-02 20:28:05] Set ATHENA_PROC_NUMBER=4
[2026-05-02 20:28:05] Set ATHENA_CORE_NUMBER=4
[2026-05-02 20:28:05] Starting ATLAS job with PandaID=7120229962
[2026-05-02 20:28:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-03 00:41:08]  *** The last 200 lines of the pilot log: ***
[2026-05-03 00:41:08] 2026-05-02 22:40:22,391 | INFO     | monitor loop #1041: job 0:7120229962 is in state 'finished'
[2026-05-03 00:41:08] 2026-05-02 22:40:22,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,430 | INFO     | job 7120229962 has state=finished
[2026-05-03 00:41:08] 2026-05-02 22:40:22,430 | INFO     | preparing for final server update for job 7120229962 in state='finished'
[2026-05-03 00:41:08] 2026-05-02 22:40:22,431 | INFO     | reading metadata from: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7120229962/jobReport.json
[2026-05-03 00:41:08] 2026-05-02 22:40:22,433 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot128/slots/0/workernode_map.json
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | INFO     | this job has now completed (state=finished)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | INFO     | log transfer has been attempted: DONE
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | INFO     | job 7120229962 has finished - writing final server update
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_74497/.job.ad'
[2026-05-03 00:41:08] 2026-05-02 22:40:22,434 | INFO     | total number of processed events: 400 (read)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,452 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7120229962/memory_monitor_summary.json (trf name=prmon)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,452 | INFO     | extracted standard info from prmon json
[2026-05-03 00:41:08] 2026-05-02 22:40:22,452 | INFO     | extracted standard memory fields from prmon json
[2026-05-03 00:41:08] 2026-05-02 22:40:22,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-03 00:41:08] 2026-05-02 22:40:22,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-03 00:41:08] 2026-05-02 22:40:22,456 | INFO     | fitting pss+swap vs Time
[2026-05-03 00:41:08] 2026-05-02 22:40:22,457 | INFO     | sum of square deviations: 4672638308.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,458 | INFO     | sum of deviations: 19333287235.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,459 | INFO     | mean x (centered): 0.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,459 | INFO     | mean y: 2339796.453441296
[2026-05-03 00:41:08] 2026-05-02 22:40:22,459 | INFO     | intersect: 2339796.453441296
[2026-05-03 00:41:08] 2026-05-02 22:40:22,459 | INFO     | chi2: 1.4260278093221932
[2026-05-03 00:41:08] 2026-05-02 22:40:22,460 | INFO     | sum of square deviations: 4394577280.5
[2026-05-03 00:41:08] 2026-05-02 22:40:22,461 | INFO     | sum of deviations: 18754337607.499996
[2026-05-03 00:41:08] 2026-05-02 22:40:22,461 | INFO     | mean x (centered): 0.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,461 | INFO     | mean y: 2339479.020661157
[2026-05-03 00:41:08] 2026-05-02 22:40:22,461 | INFO     | intersect: 2339479.020661157
[2026-05-03 00:41:08] 2026-05-02 22:40:22,462 | INFO     | chi2: 1.4265617080824295
[2026-05-03 00:41:08] 2026-05-02 22:40:22,462 | INFO     | current chi2=1.4265617080824295 (change=-0.037439575634231066 %)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,462 | INFO     | right removable region: 241
[2026-05-03 00:41:08] 2026-05-02 22:40:22,462 | INFO     | sum of square deviations: 4394577280.5
[2026-05-03 00:41:08] 2026-05-02 22:40:22,464 | INFO     | sum of deviations: -14090730105.499998
[2026-05-03 00:41:08] 2026-05-02 22:40:22,464 | INFO     | mean x (centered): 0.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,464 | INFO     | mean y: 2357942.847107438
[2026-05-03 00:41:08] 2026-05-02 22:40:22,464 | INFO     | intersect: 2357942.847107438
[2026-05-03 00:41:08] 2026-05-02 22:40:22,465 | INFO     | chi2: 0.031022772314135312
[2026-05-03 00:41:08] 2026-05-02 22:40:22,465 | INFO     | current chi2=0.031022772314135312 (change=97.8245324452066 %)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,465 | INFO     | sum of square deviations: 4127772278.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | sum of deviations: -13440885302.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | mean x (centered): 0.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | mean y: 2357559.805907173
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | intersect: 2357559.805907173
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | chi2: 0.027935504858834722
[2026-05-03 00:41:08] 2026-05-02 22:40:22,467 | INFO     | current chi2=0.027935504858834722 (change=9.951616909149987 %)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,468 | INFO     | left removable region: 10
[2026-05-03 00:41:08] 2026-05-02 22:40:22,468 | INFO     | sum of square deviations: 3822136780.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,469 | INFO     | sum of deviations: -13330083498.999998
[2026-05-03 00:41:08] 2026-05-02 22:40:22,470 | INFO     | mean x (centered): 0.0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,470 | INFO     | mean y: 2357626.393939394
[2026-05-03 00:41:08] 2026-05-02 22:40:22,470 | INFO     | intersect: 2357626.393939394
[2026-05-03 00:41:08] 2026-05-02 22:40:22,470 | INFO     | chi2: 0.027430124192028477
[2026-05-03 00:41:08] 2026-05-02 22:40:22,470 | INFO     | current memory leak: -3.49 B/s (using 231 data points, chi2=0.03)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,471 | INFO     | could have reported an average CPU frequency of 2714 MHz (12 samples)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,471 | INFO     | ..............................
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . Timing measurements:
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . get job = 0 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . initial setup = 10 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . payload setup = 19 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . stage-in = 0 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . payload execution = 15066 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . stage-out = 1 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | . log creation = 0 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,472 | INFO     | ..............................
[2026-05-03 00:41:08] 2026-05-02 22:40:22,572 | INFO     | 
[2026-05-03 00:41:08] 2026-05-02 22:40:22,572 | INFO     | job summary report
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | --------------------------------------------------
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | PanDA job id: 7120229962
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | task id: 49863851
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | errors: (none)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | pilot state: finished 
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | transexitcode: 0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | exeerrorcode: 0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | exeerrordiag: 
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | exitcode: 0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | exitmsg: OK
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | cpuconsumptiontime: 57382 s
[2026-05-03 00:41:08] 2026-05-02 22:40:22,573 | INFO     | nevents: 400
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | neventsw: 0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | pid: 2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | pgrp: 2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | corecount: 4
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | event service: False
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | sizes: {0: 2275396, 1: 2277225, 12: 2277225, 15089: 2309150, 15090: 2318172, 15093: 2318228, 15094: 2318550}
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | --------------------------------------------------
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | 
[2026-05-03 00:41:08] 2026-05-02 22:40:22,574 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-05-03 00:41:08] 2026-05-02 22:40:22,607 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,607 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | job 7120229962 has completed (purged errors)
[2026-05-03 00:41:08] 2026-05-02 22:40:22,609 | INFO     | overall cleanup function is called
[2026-05-03 00:41:08] 2026-05-02 22:40:23,618 | INFO     | --- collectZombieJob: --- 10, [2405702]
[2026-05-03 00:41:08] 2026-05-02 22:40:23,619 | INFO     | zombie collector waiting for pid 2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:23,619 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-03 00:41:08] 2026-05-02 22:40:23,619 | INFO     | collected zombie processes
[2026-05-03 00:41:08] 2026-05-02 22:40:23,619 | INFO     | will attempt to kill all subprocesses of pid=2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:24,300 | INFO     | process IDs to be killed: [2405702] (in reverse order)
[2026-05-03 00:41:08] 2026-05-02 22:40:24,633 | WARNING  | found no corresponding commands to process id(s)
[2026-05-03 00:41:08] 2026-05-02 22:40:24,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-03 00:41:08] 2026-05-02 22:40:24,664 | INFO     | did not find any defunct processes belonging to 2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:24,692 | INFO     | did not find any defunct processes belonging to 2405702
[2026-05-03 00:41:08] 2026-05-02 22:40:24,692 | INFO     | Ready for new job
[2026-05-03 00:41:08] 2026-05-02 22:40:24,695 | INFO     | ***************************************
[2026-05-03 00:41:08] 2026-05-02 22:40:24,695 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-03 00:41:08] 2026-05-02 22:40:24,695 | INFO     | ***************************************
[2026-05-03 00:41:08] 2026-05-02 22:40:24,695 | INFO     | 
[2026-05-03 00:41:08] 2026-05-02 22:40:24,704 | INFO     | architecture information:
[2026-05-03 00:41:08] 2026-05-02 22:40:24,704 | INFO     | executing command: cat /etc/os-release
[2026-05-03 00:41:08] 2026-05-02 22:40:24,733 | INFO     | cat /etc/os-release:
[2026-05-03 00:41:08] NAME="CentOS Linux"
[2026-05-03 00:41:08] VERSION="7 (Core)"
[2026-05-03 00:41:08] ID="centos"
[2026-05-03 00:41:08] ID_LIKE="rhel fedora"
[2026-05-03 00:41:08] VERSION_ID="7"
[2026-05-03 00:41:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-03 00:41:08] ANSI_COLOR="0;31"
[2026-05-03 00:41:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-03 00:41:08] HOME_URL="https://www.centos.org/"
[2026-05-03 00:41:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-03 00:41:08] 
[2026-05-03 00:41:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-03 00:41:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-03 00:41:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-03 00:41:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-03 00:41:08] 
[2026-05-03 00:41:08] 2026-05-02 22:40:24,733 | INFO     | ***************************************
[2026-05-03 00:41:08] 2026-05-02 22:40:25,236 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-05-03 00:41:08] 2026-05-02 22:40:25,269 | INFO     | sufficient remaining disk space (187077492736 B)
[2026-05-03 00:41:08] 2026-05-02 22:40:25,269 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-03 00:41:08] 2026-05-02 22:40:25,269 | INFO     | current server update state: UPDATING_FINAL
[2026-05-03 00:41:08] 2026-05-02 22:40:25,269 | INFO     | update_server=False
[2026-05-03 00:41:08] 2026-05-02 22:40:25,269 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-03 00:41:08] 2026-05-02 22:40:25,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-03 00:41:08] 2026-05-02 22:40:25,344 | INFO     | all job control threads have been joined
[2026-05-03 00:41:08] 2026-05-02 22:40:25,768 | INFO     | all data control threads have been joined
[2026-05-03 00:41:08] 2026-05-02 22:40:25,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-03 00:41:08] 2026-05-02 22:40:25,913 | INFO     | aborting loop
[2026-05-03 00:41:08] 2026-05-02 22:40:26,274 | INFO     | [job] retrieve thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,354 | INFO     | all payload control threads have been joined
[2026-05-03 00:41:08] 2026-05-02 22:40:26,372 | INFO     | [job] control thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,385 | INFO     | [job] create_data_payload thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,645 | INFO     | [payload] execute_payloads thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,774 | INFO     | [data] control thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,918 | INFO     | [job] job monitor thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:26,993 | INFO     | [payload] failed_post thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,073 | INFO     | [payload] validate_pre thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,276 | INFO     | [data] copytool_out thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,293 | INFO     | [payload] validate_post thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,308 | INFO     | [data] copytool_in thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,359 | INFO     | [payload] control thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:27,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-03 00:41:08] 2026-05-02 22:40:27,766 | INFO     | [job] validate thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:28,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-03 00:41:08] 2026-05-02 22:40:28,586 | INFO     | [job] queue monitor thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:32,446 | INFO     | [data] queue_monitor thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:35,623 | INFO     | job.realtimelogging is not enabled
[2026-05-03 00:41:08] 2026-05-02 22:40:36,629 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-03 00:41:08] 2026-05-02 22:40:55,770 | INFO     | PID=2400364 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-03 00:41:08] 2026-05-02 22:40:55,771 | INFO     | .. there are 24 such processes running
[2026-05-03 00:41:08] 2026-05-02 22:40:55,772 | INFO     | found 0 job(s) in 20 queues
[2026-05-03 00:41:08] 2026-05-02 22:40:55,773 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-03 00:41:08] 2026-05-02 22:40:55,773 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-03 00:41:08] 2026-05-02 22:41:01,905 | INFO     | [monitor] cgroup control has ended
[2026-05-03 00:41:08] 2026-05-02 22:41:02,910 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23160627914560)>', '<ExcThread(monitor, started 23160321701632)>']
[2026-05-03 00:41:08] 2026-05-02 22:41:03,812 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-03 00:41:08] 2026-05-02 22:41:03,813 | INFO     | [monitor] control thread has ended
[2026-05-03 00:41:08] 2026-05-02 22:41:07,936 | INFO     | all workflow threads have been joined
[2026-05-03 00:41:08] 2026-05-02 22:41:07,936 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-03 00:41:08] 2026-05-02 22:41:07,936 | INFO     | traces error code: 0
[2026-05-03 00:41:08] 2026-05-02 22:41:07,936 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-03 00:41:08] 2026-05-02 22:41:08,108 [wrapper] ==== pilot stdout END ====
[2026-05-03 00:41:08] 2026-05-02 22:41:08,113 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-03 00:41:08] 2026-05-02 22:41:08,117 [wrapper] pilotpid: 2400364
[2026-05-03 00:41:08] 2026-05-02 22:41:08,121 [wrapper] Pilot exit status: 0
[2026-05-03 00:41:08] 2026-05-02 22:41:08,137 [wrapper] pandaids: 7120229962
[2026-05-03 00:41:08] 2026-05-02 22:41:08,354 [wrapper] cleanup supervisor_pilot 2959146 2400365
[2026-05-03 00:41:08] 2026-05-02 22:41:08,359 [wrapper] Test setup, not cleaning
[2026-05-03 00:41:08] 2026-05-02 22:41:08,363 [wrapper] apfmon messages muted
[2026-05-03 00:41:08] 2026-05-02 22:41:08,367 [wrapper] ==== wrapper stdout END ====
[2026-05-03 00:41:08] 2026-05-02 22:41:08,370 [wrapper] ==== wrapper stderr END ====
[2026-05-03 00:41:08]  *** Error codes and diagnostics ***
[2026-05-03 00:41:08]     "exeErrorCode": 0,
[2026-05-03 00:41:08]     "pilotErrorCode": 0,
[2026-05-03 00:41:08]  *** Listing of results directory ***
[2026-05-03 00:41:08] total 473748
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:43 queuedata.json
[2026-05-03 00:41:08] -rwx------. 1 boinc boinc     36322 Apr 30 10:43 runpilot2-wrapper.sh
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc       100 May  2 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-03 00:41:08] -rwxr-xr-x. 1 boinc boinc      7986 May  2 20:27 run_atlas
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc       105 May  2 20:27 job.xml
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc      6540 May  2 20:28 init_data.xml
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc 260519147 May  2 20:28 EVNT.49863848._000229.pool.root.1
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc     15667 May  2 20:28 start_atlas.sh
[2026-05-03 00:41:08] drwxrwx--x. 2 boinc boinc      4096 May  2 20:28 shared
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc    697438 May  2 20:28 input.tar.gz
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc         0 May  2 20:28 boinc_lockfile
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc      2650 May  2 20:28 pandaJob.out
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc   1002975 May  2 20:28 agis_schedconf.cvmfs.json
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc       444 May  2 20:28 workernode_map.json
[2026-05-03 00:41:08] drwx------. 5 boinc boinc      4096 May  2 20:28 pilot3
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc 217010250 May  3 00:39 HITS.49863851._005448.pool.root.1
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc       488 May  3 00:39 boinc_task_state.xml
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc      1027 May  3 00:40 memory_monitor_summary.json
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc   1508687 May  3 00:40 agis_ddmendpoints.agis.ALL.json
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc    333627 May  3 00:40 log.49863851._005448.job.log.tgz.1
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc      6376 May  3 00:40 heartbeat_new.json
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc      6267 May  3 00:40 heartbeat.json
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc      8192 May  3 00:40 boinc_mmap_file
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc        27 May  3 00:40 wrapper_checkpoint.txt
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc        95 May  3 00:40 pilot_heartbeat.json
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc      4906 May  3 00:41 pilotlog.txt
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc   1392075 May  3 00:41 log.49863851._005448.job.log.1
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc       357 May  3 00:41 output.list
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc       410 May  3 00:41 runtime_log
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc   1740800 May  3 00:41 result.tar.gz
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc      8845 May  3 00:41 runtime_log.err
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc       666 May  3 00:41 164303e5b37e.diag
[2026-05-03 00:41:08] -rw-r--r--. 1 boinc boinc     21075 May  3 00:41 stderr.txt
[2026-05-03 00:41:08] HITS file was successfully produced:
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc 217010250 May  3 00:39 shared/HITS.pool.root.1
[2026-05-03 00:41:08]  *** Contents of shared directory: ***
[2026-05-03 00:41:08] total 468752
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc 260519147 May  2 20:28 ATLAS.root_0
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc     15667 May  2 20:28 start_atlas.sh
[2026-05-03 00:41:08] -rw-r--r--. 2 boinc boinc    697438 May  2 20:28 input.tar.gz
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc 217010250 May  3 00:39 HITS.pool.root.1
[2026-05-03 00:41:08] -rw-------. 1 boinc boinc   1740800 May  3 00:41 result.tar.gz
00:41:10 (2395856): run_atlas exited; CPU time 58260.495671
00:41:10 (2395856): called boinc_finish(0)

</stderr_txt>
]]>

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