Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:34:12 (21272): wrapper (7.7.26015): starting
17:34:12 (21272): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 17:34:12] Arguments: --nthreads 8
[2026-04-30 17:34:12] Threads: 8
[2026-04-30 17:34:12] Checking for CVMFS
[2026-04-30 17:34:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 17:34:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 17:34:17] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 17:34:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 17:34:18] 2.11.2.0 21848 21516 99324 159056 2 54 16606091 25165824 96 130560 0 6356662 99.851 5794871 5475 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 17:34:18] CVMFS is ok
[2026-04-30 17:34:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 17:34:18] Checking for apptainer binary...
[2026-04-30 17:34:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 17:34:18] Running /usr/bin/apptainer --version
[2026-04-30 17:34:18] apptainer version 1.3.2-1.el7
[2026-04-30 17:34:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 17:34:27] cg-vwn454.simple-grid.lan
[2026-04-30 17:34:27] apptainer works
[2026-04-30 17:34:27] Set ATHENA_PROC_NUMBER=8
[2026-04-30 17:34:27] Set ATHENA_CORE_NUMBER=8
[2026-04-30 17:34:27] Starting ATLAS job with PandaID=7120227461
[2026-04-30 17:34:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 22:41:51]  *** The last 200 lines of the pilot log: ***
[2026-04-30 22:41:51] 2026-04-30 20:41:04,672 | INFO     | sum of square deviations: 7484568240.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,675 | INFO     | sum of deviations: 200831321628.00006
[2026-04-30 22:41:51] 2026-04-30 20:41:04,675 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,675 | INFO     | mean y: 2434101.498269896
[2026-04-30 22:41:51] 2026-04-30 20:41:04,675 | INFO     | intersect: 2434101.498269896
[2026-04-30 22:41:51] 2026-04-30 20:41:04,676 | INFO     | chi2: 9.937847283497293
[2026-04-30 22:41:51] 2026-04-30 20:41:04,677 | INFO     | sum of square deviations: 7102775035.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,679 | INFO     | sum of deviations: 216247198928.00003
[2026-04-30 22:41:51] 2026-04-30 20:41:04,679 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,680 | INFO     | mean y: 2440150.1830985914
[2026-04-30 22:41:51] 2026-04-30 20:41:04,680 | INFO     | intersect: 2440150.1830985914
[2026-04-30 22:41:51] 2026-04-30 20:41:04,680 | INFO     | chi2: 9.236681022646916
[2026-04-30 22:41:51] 2026-04-30 20:41:04,680 | INFO     | current chi2=9.236681022646916 (change=7.055514548052348 %)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,680 | INFO     | right removable region: 283
[2026-04-30 22:41:51] 2026-04-30 20:41:04,681 | INFO     | sum of square deviations: 7102775035.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,683 | INFO     | sum of deviations: 96555972281.5
[2026-04-30 22:41:51] 2026-04-30 20:41:04,684 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,684 | INFO     | mean y: 2475742.2429577466
[2026-04-30 22:41:51] 2026-04-30 20:41:04,684 | INFO     | intersect: 2475742.2429577466
[2026-04-30 22:41:51] 2026-04-30 20:41:04,684 | INFO     | chi2: 4.53710869657569
[2026-04-30 22:41:51] 2026-04-30 20:41:04,685 | INFO     | current chi2=4.53710869657569 (change=54.34515577523539 %)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,685 | INFO     | sum of square deviations: 6734191380.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,687 | INFO     | sum of deviations: 12198427968.999992
[2026-04-30 22:41:51] 2026-04-30 20:41:04,688 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,688 | INFO     | mean y: 2510616.8853046596
[2026-04-30 22:41:51] 2026-04-30 20:41:04,688 | INFO     | intersect: 2510616.8853046596
[2026-04-30 22:41:51] 2026-04-30 20:41:04,688 | INFO     | chi2: 1.2781259746112164
[2026-04-30 22:41:51] 2026-04-30 20:41:04,688 | INFO     | current chi2=1.2781259746112164 (change=71.82950508600639 %)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,689 | INFO     | sum of square deviations: 6378584712.5
[2026-04-30 22:41:51] 2026-04-30 20:41:04,691 | INFO     | sum of deviations: -11559184630.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,691 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,692 | INFO     | mean y: 2520722.0875912406
[2026-04-30 22:41:51] 2026-04-30 20:41:04,692 | INFO     | intersect: 2520722.0875912406
[2026-04-30 22:41:51] 2026-04-30 20:41:04,692 | INFO     | chi2: 0.8265248991579182
[2026-04-30 22:41:51] 2026-04-30 20:41:04,692 | INFO     | current chi2=0.8265248991579182 (change=35.333064535416185 %)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,693 | INFO     | sum of square deviations: 6035722470.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,695 | INFO     | sum of deviations: -6652322486.999996
[2026-04-30 22:41:51] 2026-04-30 20:41:04,695 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,695 | INFO     | mean y: 2518518.628252788
[2026-04-30 22:41:51] 2026-04-30 20:41:04,695 | INFO     | intersect: 2518518.628252788
[2026-04-30 22:41:51] 2026-04-30 20:41:04,696 | INFO     | chi2: 0.8040141831314571
[2026-04-30 22:41:51] 2026-04-30 20:41:04,696 | INFO     | current chi2=0.8040141831314571 (change=2.7235375545728213 %)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,696 | INFO     | left removable region: 20
[2026-04-30 22:41:51] 2026-04-30 20:41:04,696 | INFO     | sum of square deviations: 5640782972.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,699 | INFO     | sum of deviations: 11073179879.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,699 | INFO     | mean x (centered): 0.0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,699 | INFO     | mean y: 2526574.536121673
[2026-04-30 22:41:51] 2026-04-30 20:41:04,699 | INFO     | intersect: 2526574.536121673
[2026-04-30 22:41:51] 2026-04-30 20:41:04,699 | INFO     | chi2: 0.01242231708496047
[2026-04-30 22:41:51] 2026-04-30 20:41:04,700 | INFO     | current memory leak: 1.96 B/s (using 263 data points, chi2=0.01)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,700 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,700 | INFO     | ..............................
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . Timing measurements:
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . get job = 0 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . initial setup = 115 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . payload setup = 238 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . stage-in = 0 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . payload execution = 17733 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . stage-out = 3 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | . log creation = 1 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,701 | INFO     | ..............................
[2026-04-30 22:41:51] 2026-04-30 20:41:04,913 | INFO     | 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,913 | INFO     | job summary report
[2026-04-30 22:41:51] 2026-04-30 20:41:04,913 | INFO     | --------------------------------------------------
[2026-04-30 22:41:51] 2026-04-30 20:41:04,913 | INFO     | PanDA job id: 7120227461
[2026-04-30 22:41:51] 2026-04-30 20:41:04,913 | INFO     | task id: 49863752
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | errors: (none)
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | pilot state: finished 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | transexitcode: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | exeerrorcode: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | exeerrordiag: 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | exitcode: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | exitmsg: OK
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | cpuconsumptiontime: 72305 s
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | nevents: 400
[2026-04-30 22:41:51] 2026-04-30 20:41:04,914 | INFO     | neventsw: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | pid: 29765
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | pgrp: 29765
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | corecount: 8
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | event service: False
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | sizes: {0: 2275939, 1: 2276624, 2: 2278453, 12: 2278453, 17975: 2310762, 17981: 2319760, 17983: 2320138}
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | --------------------------------------------------
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,915 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-04-30 22:41:51] 2026-04-30 20:41:04,982 | INFO     | PID=25294 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 22:41:51] 2026-04-30 20:41:04,983 | INFO     | .. there are 2 such processes running
[2026-04-30 22:41:51] 2026-04-30 20:41:05,494 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,494 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,494 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,495 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | job 7120227461 has completed (purged errors)
[2026-04-30 22:41:51] 2026-04-30 20:41:05,496 | INFO     | overall cleanup function is called
[2026-04-30 22:41:51] 2026-04-30 20:41:06,505 | INFO     | --- collectZombieJob: --- 10, [29765]
[2026-04-30 22:41:51] 2026-04-30 20:41:06,505 | INFO     | zombie collector waiting for pid 29765
[2026-04-30 22:41:51] 2026-04-30 20:41:06,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 22:41:51] 2026-04-30 20:41:06,505 | INFO     | collected zombie processes
[2026-04-30 22:41:51] 2026-04-30 20:41:06,505 | INFO     | will attempt to kill all subprocesses of pid=29765
[2026-04-30 22:41:51] 2026-04-30 20:41:06,561 | INFO     | process IDs to be killed: [29765] (in reverse order)
[2026-04-30 22:41:51] 2026-04-30 20:41:07,435 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 22:41:51] 2026-04-30 20:41:07,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 22:41:51] 2026-04-30 20:41:07,437 | INFO     | did not find any defunct processes belonging to 29765
[2026-04-30 22:41:51] 2026-04-30 20:41:07,439 | INFO     | did not find any defunct processes belonging to 29765
[2026-04-30 22:41:51] 2026-04-30 20:41:07,439 | INFO     | Ready for new job
[2026-04-30 22:41:51] 2026-04-30 20:41:07,441 | INFO     | ***************************************
[2026-04-30 22:41:51] 2026-04-30 20:41:07,441 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 22:41:51] 2026-04-30 20:41:07,441 | INFO     | ***************************************
[2026-04-30 22:41:51] 2026-04-30 20:41:07,441 | INFO     | 
[2026-04-30 22:41:51] 2026-04-30 20:41:07,442 | INFO     | pilot is running in a VM
[2026-04-30 22:41:51] 2026-04-30 20:41:07,442 | INFO     | architecture information:
[2026-04-30 22:41:51] 2026-04-30 20:41:07,451 | INFO     | executing command: cat /etc/os-release
[2026-04-30 22:41:51] 2026-04-30 20:41:07,768 | INFO     | cat /etc/os-release:
[2026-04-30 22:41:51] NAME="CentOS Linux"
[2026-04-30 22:41:51] VERSION="7 (Core)"
[2026-04-30 22:41:51] ID="centos"
[2026-04-30 22:41:51] ID_LIKE="rhel fedora"
[2026-04-30 22:41:51] VERSION_ID="7"
[2026-04-30 22:41:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 22:41:51] ANSI_COLOR="0;31"
[2026-04-30 22:41:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 22:41:51] HOME_URL="https://www.centos.org/"
[2026-04-30 22:41:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 22:41:51] 
[2026-04-30 22:41:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 22:41:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 22:41:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 22:41:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 22:41:51] 
[2026-04-30 22:41:51] 2026-04-30 20:41:07,768 | INFO     | ***************************************
[2026-04-30 22:41:51] 2026-04-30 20:41:08,272 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-04-30 22:41:51] 2026-04-30 20:41:08,597 | INFO     | sufficient remaining disk space (496832086016 B)
[2026-04-30 22:41:51] 2026-04-30 20:41:08,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 22:41:51] 2026-04-30 20:41:08,598 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 22:41:51] 2026-04-30 20:41:08,598 | INFO     | update_server=False
[2026-04-30 22:41:51] 2026-04-30 20:41:08,598 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 22:41:51] 2026-04-30 20:41:08,896 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 22:41:51] 2026-04-30 20:41:08,896 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 22:41:51] 2026-04-30 20:41:08,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 22:41:51] 2026-04-30 20:41:08,896 | INFO     | will abort loop
[2026-04-30 22:41:51] 2026-04-30 20:41:08,951 | INFO     | all job control threads have been joined
[2026-04-30 22:41:51] 2026-04-30 20:41:09,241 | INFO     | all payload control threads have been joined
[2026-04-30 22:41:51] 2026-04-30 20:41:09,266 | INFO     | all data control threads have been joined
[2026-04-30 22:41:51] 2026-04-30 20:41:09,604 | INFO     | [job] retrieve thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:09,822 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:09,902 | INFO     | [job] job monitor thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:09,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 22:41:51] 2026-04-30 20:41:09,918 | INFO     | [payload] failed_post thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:09,957 | INFO     | [job] control thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,021 | INFO     | [data] copytool_in thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,043 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 22:41:51] 2026-04-30 20:41:10,246 | INFO     | [payload] control thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,272 | INFO     | [data] control thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,443 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,608 | INFO     | [job] validate thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,669 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 22:41:51] 2026-04-30 20:41:10,800 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,809 | INFO     | [payload] validate_post thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:10,919 | INFO     | [job] queue monitor thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:12,057 | INFO     | [data] copytool_out thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:14,681 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 22:41:51] 2026-04-30 20:41:37,115 | INFO     | PID=25294 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 22:41:51] 2026-04-30 20:41:37,115 | INFO     | .. there are 2 such processes running
[2026-04-30 22:41:51] 2026-04-30 20:41:37,116 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 22:41:51] 2026-04-30 20:41:37,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 22:41:51] 2026-04-30 20:41:37,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 22:41:51] 2026-04-30 20:41:39,307 | INFO     | [monitor] cgroup control has ended
[2026-04-30 22:41:51] 2026-04-30 20:41:40,774 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140050390280000)>', '<ExcThread(monitor, started 140049890932480)>']
[2026-04-30 22:41:51] 2026-04-30 20:41:41,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 22:41:51] 2026-04-30 20:41:41,140 | INFO     | [monitor] control thread has ended
[2026-04-30 22:41:51] 2026-04-30 20:41:45,800 | INFO     | all workflow threads have been joined
[2026-04-30 22:41:51] 2026-04-30 20:41:45,800 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 22:41:51] 2026-04-30 20:41:45,800 | INFO     | traces error code: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:45,800 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 22:41:51] 2026-04-30 20:41:46,160 [wrapper] ==== pilot stdout END ====
[2026-04-30 22:41:51] 2026-04-30 20:41:46,258 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 22:41:51] 2026-04-30 20:41:46,357 [wrapper] pilotpid: 25294
[2026-04-30 22:41:51] 2026-04-30 20:41:46,486 [wrapper] Pilot exit status: 0
[2026-04-30 22:41:51] 2026-04-30 20:41:46,974 [wrapper] pandaids: 7120227461
[2026-04-30 22:41:51] 2026-04-30 20:41:48,009 [wrapper] cleanup supervisor_pilot 16484 25295
[2026-04-30 22:41:51] 2026-04-30 20:41:48,106 [wrapper] Test setup, not cleaning
[2026-04-30 22:41:51] 2026-04-30 20:41:48,210 [wrapper] apfmon messages muted
[2026-04-30 22:41:51] 2026-04-30 20:41:48,315 [wrapper] ==== wrapper stdout END ====
[2026-04-30 22:41:51] 2026-04-30 20:41:48,430 [wrapper] ==== wrapper stderr END ====
[2026-04-30 22:41:51]  *** Error codes and diagnostics ***
[2026-04-30 22:41:51]     "exeErrorCode": 0,
[2026-04-30 22:41:51]     "pilotErrorCode": 0,
[2026-04-30 22:41:51]  *** Listing of results directory ***
[2026-04-30 22:41:51] total 467444
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:43 queuedata.json
[2026-04-30 22:41:51] -rwx------. 1 boinc boinc     36322 Apr 30 10:43 runpilot2-wrapper.sh
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc       100 Apr 30 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 22:41:51] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 17:34 run_atlas
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc       105 Apr 30 17:34 job.xml
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc      6306 Apr 30 17:34 init_data.xml
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc 255863615 Apr 30 17:34 EVNT.49863749._000194.pool.root.1
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc     15667 Apr 30 17:34 start_atlas.sh
[2026-04-30 22:41:51] drwxrwx--x. 2 boinc boinc        68 Apr 30 17:34 shared
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc    697420 Apr 30 17:34 input.tar.gz
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc         0 Apr 30 17:34 boinc_lockfile
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc      2587 Apr 30 17:34 pandaJob.out
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc       413 Apr 30 17:41 workernode_map.json
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc    995207 Apr 30 17:41 agis_schedconf.cvmfs.json
[2026-04-30 22:41:51] drwx------. 5 boinc boinc      4096 Apr 30 17:41 pilot3
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc 214502606 Apr 30 22:39 HITS.49863752._004867.pool.root.1
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc       489 Apr 30 22:39 boinc_task_state.xml
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc      1021 Apr 30 22:40 memory_monitor_summary.json
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc   1510091 Apr 30 22:40 agis_ddmendpoints.agis.ALL.json
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc    421934 Apr 30 22:41 log.49863752._004867.job.log.tgz.1
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc        95 Apr 30 22:41 pilot_heartbeat.json
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc      6340 Apr 30 22:41 heartbeat_new.json
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc      6231 Apr 30 22:41 heartbeat.json
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc      8192 Apr 30 22:41 boinc_mmap_file
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc        28 Apr 30 22:41 wrapper_checkpoint.txt
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc      5069 Apr 30 22:41 pilotlog.txt
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc   1669859 Apr 30 22:41 log.49863752._004867.job.log.1
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc       357 Apr 30 22:41 output.list
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc       410 Apr 30 22:41 runtime_log
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc   2109440 Apr 30 22:41 result.tar.gz
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc      8439 Apr 30 22:41 runtime_log.err
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc       656 Apr 30 22:41 1643c6fcc794.diag
[2026-04-30 22:41:51] -rw-r--r--. 1 boinc boinc     20609 Apr 30 22:41 stderr.txt
[2026-04-30 22:41:51] HITS file was successfully produced:
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc 214502606 Apr 30 22:39 shared/HITS.pool.root.1
[2026-04-30 22:41:51]  *** Contents of shared directory: ***
[2026-04-30 22:41:51] total 462104
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc 255863615 Apr 30 17:34 ATLAS.root_0
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc     15667 Apr 30 17:34 start_atlas.sh
[2026-04-30 22:41:51] -rw-r--r--. 2 boinc boinc    697420 Apr 30 17:34 input.tar.gz
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc 214502606 Apr 30 22:39 HITS.pool.root.1
[2026-04-30 22:41:51] -rw-------. 1 boinc boinc   2109440 Apr 30 22:41 result.tar.gz
22:41:53 (21272): run_atlas exited; CPU time 72464.142137
22:41:53 (21272): called boinc_finish(0)

</stderr_txt>
]]>

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