Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:46:55 (20277): wrapper (7.7.26015): starting
10:46:55 (20277): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 10:46:55] Arguments: --nthreads 8
[2026-04-30 10:46:55] Threads: 8
[2026-04-30 10:46:55] Checking for CVMFS
[2026-04-30 10:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 10:46:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 10:46:59] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 10:47:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 10:47:00] 2.11.2.0 4172 21121 99484 159041 3 11 19703234 25165824 96 130560 0 5159142 99.899 5824635 8484 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-04-30 10:47:00] CVMFS is ok
[2026-04-30 10:47:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 10:47:00] Checking for apptainer binary...
[2026-04-30 10:47:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 10:47:00] Running /usr/bin/apptainer --version
[2026-04-30 10:47:01] apptainer version 1.3.2-1.el7
[2026-04-30 10:47:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 10:47:34] cg-vwn373.simple-grid.lan
[2026-04-30 10:47:34] apptainer works
[2026-04-30 10:47:34] Set ATHENA_PROC_NUMBER=8
[2026-04-30 10:47:34] Set ATHENA_CORE_NUMBER=8
[2026-04-30 10:47:34] Starting ATLAS job with PandaID=7120202781
[2026-04-30 10:47:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 17:23:07]  *** The last 200 lines of the pilot log: ***
[2026-04-30 17:23:07] 2026-04-30 15:22:05,498 | INFO     | job 7120202781 has finished - writing final server update
[2026-04-30 17:23:07] 2026-04-30 15:22:05,498 | INFO     | total number of processed events: 400 (read)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,500 | INFO     | using path: /var/lib/boinc/slots/14/PanDA_Pilot-7120202781/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,501 | INFO     | extracted standard info from prmon json
[2026-04-30 17:23:07] 2026-04-30 15:22:05,501 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 17:23:07] 2026-04-30 15:22:05,502 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 17:23:07] 2026-04-30 15:22:05,502 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 17:23:07] 2026-04-30 15:22:05,510 | INFO     | fitting pss+swap vs Time
[2026-04-30 17:23:07] 2026-04-30 15:22:05,510 | INFO     | sum of square deviations: 16614964548.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,519 | INFO     | sum of deviations: 193407206339.99997
[2026-04-30 17:23:07] 2026-04-30 15:22:05,519 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,520 | INFO     | mean y: 2475944.469496021
[2026-04-30 17:23:07] 2026-04-30 15:22:05,520 | INFO     | intersect: 2475944.469496021
[2026-04-30 17:23:07] 2026-04-30 15:22:05,521 | INFO     | chi2: 8.140398624922057
[2026-04-30 17:23:07] 2026-04-30 15:22:05,521 | INFO     | sum of square deviations: 15962617433.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,526 | INFO     | sum of deviations: 215874223089.99994
[2026-04-30 17:23:07] 2026-04-30 15:22:05,526 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,526 | INFO     | mean y: 2481133.010752688
[2026-04-30 17:23:07] 2026-04-30 15:22:05,526 | INFO     | intersect: 2481133.010752688
[2026-04-30 17:23:07] 2026-04-30 15:22:05,527 | INFO     | chi2: 7.413291229360306
[2026-04-30 17:23:07] 2026-04-30 15:22:05,527 | INFO     | current chi2=7.413291229360306 (change=8.932085872744501 %)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,527 | INFO     | right removable region: 371
[2026-04-30 17:23:07] 2026-04-30 15:22:05,528 | INFO     | sum of square deviations: 15962617433.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,533 | INFO     | sum of deviations: 57802749568.500015
[2026-04-30 17:23:07] 2026-04-30 15:22:05,533 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,533 | INFO     | mean y: 2507634.2069892474
[2026-04-30 17:23:07] 2026-04-30 15:22:05,533 | INFO     | intersect: 2507634.2069892474
[2026-04-30 17:23:07] 2026-04-30 15:22:05,534 | INFO     | chi2: 3.1880164096929797
[2026-04-30 17:23:07] 2026-04-30 15:22:05,534 | INFO     | current chi2=3.1880164096929797 (change=60.83709709334407 %)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,535 | INFO     | sum of square deviations: 15327572968.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,543 | INFO     | sum of deviations: -32189889466.000004
[2026-04-30 17:23:07] 2026-04-30 15:22:05,544 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,544 | INFO     | mean y: 2529204.9891008176
[2026-04-30 17:23:07] 2026-04-30 15:22:05,544 | INFO     | intersect: 2529204.9891008176
[2026-04-30 17:23:07] 2026-04-30 15:22:05,545 | INFO     | chi2: 0.9847415757306833
[2026-04-30 17:23:07] 2026-04-30 15:22:05,545 | INFO     | current chi2=0.9847415757306833 (change=69.11115097348203 %)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,545 | INFO     | sum of square deviations: 14709598590.5
[2026-04-30 17:23:07] 2026-04-30 15:22:05,550 | INFO     | sum of deviations: -44561932524.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,550 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,550 | INFO     | mean y: 2532244.259668508
[2026-04-30 17:23:07] 2026-04-30 15:22:05,550 | INFO     | intersect: 2532244.259668508
[2026-04-30 17:23:07] 2026-04-30 15:22:05,551 | INFO     | chi2: 0.9230040619345834
[2026-04-30 17:23:07] 2026-04-30 15:22:05,551 | INFO     | current chi2=0.9230040619345834 (change=6.269412739102681 %)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,552 | INFO     | left removable region: 15
[2026-04-30 17:23:07] 2026-04-30 15:22:05,552 | INFO     | sum of square deviations: 13990234405.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,556 | INFO     | sum of deviations: -19860512553.000004
[2026-04-30 17:23:07] 2026-04-30 15:22:05,557 | INFO     | mean x (centered): 0.0
[2026-04-30 17:23:07] 2026-04-30 15:22:05,557 | INFO     | mean y: 2538441.7471910114
[2026-04-30 17:23:07] 2026-04-30 15:22:05,557 | INFO     | intersect: 2538441.7471910114
[2026-04-30 17:23:07] 2026-04-30 15:22:05,557 | INFO     | chi2: 0.13770791518557784
[2026-04-30 17:23:07] 2026-04-30 15:22:05,558 | INFO     | current memory leak: -1.42 B/s (using 356 data points, chi2=0.14)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,558 | INFO     | could have reported an average CPU frequency of 1999 MHz (16 samples)
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | ..............................
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . Timing measurements:
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . get job = 0 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . initial setup = 125 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . payload setup = 170 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . stage-in = 0 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . payload execution = 23072 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . stage-out = 4 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,559 | INFO     | . log creation = 1 s
[2026-04-30 17:23:07] 2026-04-30 15:22:05,560 | INFO     | ..............................
[2026-04-30 17:23:07] 2026-04-30 15:22:06,045 | INFO     | 
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | job summary report
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | --------------------------------------------------
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | PanDA job id: 7120202781
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | task id: 49863851
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | errors: (none)
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | pilot state: finished 
[2026-04-30 17:23:07] 2026-04-30 15:22:06,046 | INFO     | transexitcode: 0
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | exeerrorcode: 0
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | exeerrordiag: 
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | exitcode: 0
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | exitmsg: OK
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | cpuconsumptiontime: 88610 s
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | nevents: 400
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | neventsw: 0
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | pid: 28770
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | pgrp: 28770
[2026-04-30 17:23:07] 2026-04-30 15:22:06,047 | INFO     | corecount: 8
[2026-04-30 17:23:07] 2026-04-30 15:22:06,048 | INFO     | event service: False
[2026-04-30 17:23:07] 2026-04-30 15:22:06,048 | INFO     | sizes: {0: 2280081, 1: 2280994, 2: 2282596, 13: 2282596, 23247: 2317470, 23252: 2322341, 23255: 2322525, 23257: 2322719}
[2026-04-30 17:23:07] 2026-04-30 15:22:06,048 | INFO     | --------------------------------------------------
[2026-04-30 17:23:07] 2026-04-30 15:22:06,048 | INFO     | 
[2026-04-30 17:23:07] 2026-04-30 15:22:06,048 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2026-04-30 17:23:07] 2026-04-30 15:22:06,438 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,438 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,438 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,438 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,440 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 17:23:07] 2026-04-30 15:22:06,441 | INFO     | job 7120202781 has completed (purged errors)
[2026-04-30 17:23:07] 2026-04-30 15:22:06,441 | INFO     | overall cleanup function is called
[2026-04-30 17:23:07] 2026-04-30 15:22:07,449 | INFO     | --- collectZombieJob: --- 10, [28770]
[2026-04-30 17:23:07] 2026-04-30 15:22:07,450 | INFO     | zombie collector waiting for pid 28770
[2026-04-30 17:23:07] 2026-04-30 15:22:07,450 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 17:23:07] 2026-04-30 15:22:07,450 | INFO     | collected zombie processes
[2026-04-30 17:23:07] 2026-04-30 15:22:07,450 | INFO     | will attempt to kill all subprocesses of pid=28770
[2026-04-30 17:23:07] 2026-04-30 15:22:07,509 | INFO     | process IDs to be killed: [28770] (in reverse order)
[2026-04-30 17:23:07] 2026-04-30 15:22:08,490 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 17:23:07] 2026-04-30 15:22:08,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 17:23:07] 2026-04-30 15:22:08,492 | INFO     | did not find any defunct processes belonging to 28770
[2026-04-30 17:23:07] 2026-04-30 15:22:08,494 | INFO     | did not find any defunct processes belonging to 28770
[2026-04-30 17:23:07] 2026-04-30 15:22:08,494 | INFO     | Ready for new job
[2026-04-30 17:23:07] 2026-04-30 15:22:08,496 | INFO     | ***************************************
[2026-04-30 17:23:07] 2026-04-30 15:22:08,496 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 17:23:07] 2026-04-30 15:22:08,496 | INFO     | ***************************************
[2026-04-30 17:23:07] 2026-04-30 15:22:08,497 | INFO     | 
[2026-04-30 17:23:07] 2026-04-30 15:22:08,497 | INFO     | pilot is running in a VM
[2026-04-30 17:23:07] 2026-04-30 15:22:08,497 | INFO     | architecture information:
[2026-04-30 17:23:07] 2026-04-30 15:22:08,509 | INFO     | executing command: cat /etc/os-release
[2026-04-30 17:23:07] 2026-04-30 15:22:08,863 | INFO     | cat /etc/os-release:
[2026-04-30 17:23:07] NAME="CentOS Linux"
[2026-04-30 17:23:07] VERSION="7 (Core)"
[2026-04-30 17:23:07] ID="centos"
[2026-04-30 17:23:07] ID_LIKE="rhel fedora"
[2026-04-30 17:23:07] VERSION_ID="7"
[2026-04-30 17:23:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 17:23:07] ANSI_COLOR="0;31"
[2026-04-30 17:23:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 17:23:07] HOME_URL="https://www.centos.org/"
[2026-04-30 17:23:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 17:23:07] 
[2026-04-30 17:23:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 17:23:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 17:23:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 17:23:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 17:23:07] 
[2026-04-30 17:23:07] 2026-04-30 15:22:08,863 | INFO     | ***************************************
[2026-04-30 17:23:07] 2026-04-30 15:22:09,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2026-04-30 17:23:07] 2026-04-30 15:22:09,587 | INFO     | sufficient remaining disk space (496337158144 B)
[2026-04-30 17:23:07] 2026-04-30 15:22:09,587 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 17:23:07] 2026-04-30 15:22:09,588 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 17:23:07] 2026-04-30 15:22:09,588 | INFO     | update_server=False
[2026-04-30 17:23:07] 2026-04-30 15:22:09,588 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 17:23:07] 2026-04-30 15:22:09,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 17:23:07] 2026-04-30 15:22:09,750 | INFO     | all data control threads have been joined
[2026-04-30 17:23:07] 2026-04-30 15:22:09,758 | INFO     | all payload control threads have been joined
[2026-04-30 17:23:07] 2026-04-30 15:22:09,773 | INFO     | all job control threads have been joined
[2026-04-30 17:23:07] 2026-04-30 15:22:10,007 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 17:23:07] 2026-04-30 15:22:10,008 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 17:23:07] 2026-04-30 15:22:10,008 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 17:23:07] 2026-04-30 15:22:10,008 | INFO     | will abort loop
[2026-04-30 17:23:07] 2026-04-30 15:22:10,594 | INFO     | [job] retrieve thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,602 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,745 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,757 | INFO     | [data] control thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,765 | INFO     | [payload] control thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 17:23:07] 2026-04-30 15:22:10,770 | INFO     | [payload] failed_post thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,779 | INFO     | [job] control thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:10,967 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,013 | INFO     | [job] job monitor thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 17:23:07] 2026-04-30 15:22:11,207 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,619 | INFO     | [payload] validate_post thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,773 | INFO     | [job] queue monitor thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,775 | INFO     | [job] validate thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:11,778 | INFO     | [data] copytool_in thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:13,078 | INFO     | [data] copytool_out thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:13,598 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 17:23:07] 2026-04-30 15:22:26,376 [wrapper] supervise_pilot (15 min periods counter: 27)
[2026-04-30 17:23:07] 2026-04-30 15:22:38,871 | INFO     | PID=24328 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-04-30 17:23:07] 2026-04-30 15:22:38,872 | INFO     | .. there are 2 such processes running
[2026-04-30 17:23:07] 2026-04-30 15:22:38,878 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 17:23:07] 2026-04-30 15:22:38,879 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 17:23:07] 2026-04-30 15:22:38,879 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 17:23:07] 2026-04-30 15:22:54,993 | INFO     | [monitor] cgroup control has ended
[2026-04-30 17:23:07] 2026-04-30 15:22:55,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140115862513472)>', '<ExcThread(monitor, started 140115053639424)>']
[2026-04-30 17:23:07] 2026-04-30 15:22:55,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 17:23:07] 2026-04-30 15:22:55,981 | INFO     | [monitor] control thread has ended
[2026-04-30 17:23:07] 2026-04-30 15:23:00,955 | INFO     | all workflow threads have been joined
[2026-04-30 17:23:07] 2026-04-30 15:23:00,956 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 17:23:07] 2026-04-30 15:23:00,956 | INFO     | traces error code: 0
[2026-04-30 17:23:07] 2026-04-30 15:23:00,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 17:23:07] 2026-04-30 15:23:01,356 [wrapper] ==== pilot stdout END ====
[2026-04-30 17:23:07] 2026-04-30 15:23:01,464 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 17:23:07] 2026-04-30 15:23:01,542 [wrapper] pilotpid: 24328
[2026-04-30 17:23:07] 2026-04-30 15:23:01,675 [wrapper] Pilot exit status: 0
[2026-04-30 17:23:07] 2026-04-30 15:23:02,240 [wrapper] pandaids: 7120202781
[2026-04-30 17:23:07] 2026-04-30 15:23:03,367 [wrapper] cleanup supervisor_pilot  4846 24329
[2026-04-30 17:23:07] 2026-04-30 15:23:03,501 [wrapper] Test setup, not cleaning
[2026-04-30 17:23:07] 2026-04-30 15:23:03,628 [wrapper] apfmon messages muted
[2026-04-30 17:23:07] 2026-04-30 15:23:03,772 [wrapper] ==== wrapper stdout END ====
[2026-04-30 17:23:07] 2026-04-30 15:23:03,904 [wrapper] ==== wrapper stderr END ====
[2026-04-30 17:23:07]  *** Error codes and diagnostics ***
[2026-04-30 17:23:07]     "exeErrorCode": 0,
[2026-04-30 17:23:07]     "pilotErrorCode": 0,
[2026-04-30 17:23:07]  *** Listing of results directory ***
[2026-04-30 17:23:07] total 476132
[2026-04-30 17:23:07] -rwx------. 1 boinc boinc     36322 Apr 30 09:51 runpilot2-wrapper.sh
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:22 queuedata.json
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc       100 Apr 30 10:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 17:23:07] -rwxr-xr-x. 1 boinc boinc      7986 Apr 30 10:46 run_atlas
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc       105 Apr 30 10:46 job.xml
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc      6308 Apr 30 10:46 init_data.xml
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc 261784996 Apr 30 10:46 EVNT.49863848._000221.pool.root.1
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc     15667 Apr 30 10:46 start_atlas.sh
[2026-04-30 17:23:07] drwxrwx--x. 2 boinc boinc        68 Apr 30 10:46 shared
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc    697440 Apr 30 10:46 input.tar.gz
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc         0 Apr 30 10:46 boinc_lockfile
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc      2650 Apr 30 10:47 pandaJob.out
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc       415 Apr 30 10:54 workernode_map.json
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc   1000927 Apr 30 10:54 agis_schedconf.cvmfs.json
[2026-04-30 17:23:07] drwx------. 5 boinc boinc      4096 Apr 30 10:54 pilot3
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc 216415287 Apr 30 17:20 HITS.49863851._005261.pool.root.1
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc       488 Apr 30 17:20 boinc_task_state.xml
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc      1009 Apr 30 17:21 memory_monitor_summary.json
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc   1510091 Apr 30 17:21 agis_ddmendpoints.agis.ALL.json
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc    480038 Apr 30 17:21 log.49863851._005261.job.log.tgz.1
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc      6331 Apr 30 17:22 heartbeat_new.json
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc      6222 Apr 30 17:22 heartbeat.json
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc        95 Apr 30 17:22 pilot_heartbeat.json
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc      8192 Apr 30 17:22 boinc_mmap_file
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc        28 Apr 30 17:22 wrapper_checkpoint.txt
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc      5070 Apr 30 17:23 pilotlog.txt
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc   2138159 Apr 30 17:23 log.49863851._005261.job.log.1
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc       357 Apr 30 17:23 output.list
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc       410 Apr 30 17:23 runtime_log
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc   2631680 Apr 30 17:23 result.tar.gz
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc      8455 Apr 30 17:23 runtime_log.err
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc       656 Apr 30 17:23 09ff5b5ccd70.diag
[2026-04-30 17:23:07] -rw-r--r--. 1 boinc boinc     20590 Apr 30 17:23 stderr.txt
[2026-04-30 17:23:07] HITS file was successfully produced:
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc 216415287 Apr 30 17:20 shared/HITS.pool.root.1
[2026-04-30 17:23:07]  *** Contents of shared directory: ***
[2026-04-30 17:23:07] total 470268
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc 261784996 Apr 30 10:46 ATLAS.root_0
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc     15667 Apr 30 10:46 start_atlas.sh
[2026-04-30 17:23:07] -rw-r--r--. 2 boinc boinc    697440 Apr 30 10:46 input.tar.gz
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc 216415287 Apr 30 17:20 HITS.pool.root.1
[2026-04-30 17:23:07] -rw-------. 1 boinc boinc   2631680 Apr 30 17:23 result.tar.gz
17:23:08 (20277): run_atlas exited; CPU time 88840.528037
17:23:08 (20277): called boinc_finish(0)

</stderr_txt>
]]>

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