Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:39:46 (2233818): wrapper (7.7.26015): starting
03:39:46 (2233818): wrapper: running run_atlas (--nthreads 4)
[2026-05-04 03:39:46] Arguments: --nthreads 4
[2026-05-04 03:39:46] Threads: 4
[2026-05-04 03:39:46] Checking for CVMFS
[2026-05-04 03:39:46] No cvmfs_config command found, will try listing directly
[2026-05-04 03:39:46] CVMFS is ok
[2026-05-04 03:39:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-05-04 03:39:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-05-04 03:39:46] Further information can be found at the LHC@home message board.
[2026-05-04 03:39:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-05-04 03:39:46] Checking for apptainer binary...
[2026-05-04 03:39:46] which: no apptainer in ((null))
[2026-05-04 03:39:46] apptainer is not installed, using version from CVMFS
[2026-05-04 03:39:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-05-04 03:39:46] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment ugluk10.grid.cesnet.cz
[2026-05-04 03:39:46] apptainer works
[2026-05-04 03:39:46] Set ATHENA_PROC_NUMBER=4
[2026-05-04 03:39:46] Set ATHENA_CORE_NUMBER=4
[2026-05-04 03:39:46] Starting ATLAS job with PandaID=7120114244
[2026-05-04 03:39:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-05-04 08:43:36]  *** The last 200 lines of the pilot log: ***
[2026-05-04 08:43:36] 2026-05-04 06:42:51,192 | INFO     | extracted standard info from prmon json
[2026-05-04 08:43:36] 2026-05-04 06:42:51,193 | INFO     | extracted standard memory fields from prmon json
[2026-05-04 08:43:36] 2026-05-04 06:42:51,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-05-04 08:43:36] 2026-05-04 06:42:51,193 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-05-04 08:43:36] 2026-05-04 06:42:51,199 | INFO     | fitting pss+swap vs Time
[2026-05-04 08:43:36] 2026-05-04 06:42:51,200 | INFO     | sum of square deviations: 8205826414.5
[2026-05-04 08:43:36] 2026-05-04 06:42:51,203 | INFO     | sum of deviations: 8636715377.999989
[2026-05-04 08:43:36] 2026-05-04 06:42:51,203 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,203 | INFO     | mean y: 2337350.8926174496
[2026-05-04 08:43:36] 2026-05-04 06:42:51,203 | INFO     | intersect: 2337350.8926174496
[2026-05-04 08:43:36] 2026-05-04 06:42:51,204 | INFO     | chi2: 2.1859980271965886
[2026-05-04 08:43:36] 2026-05-04 06:42:51,204 | INFO     | sum of square deviations: 7799669962.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,207 | INFO     | sum of deviations: 26894219666.999992
[2026-05-04 08:43:36] 2026-05-04 06:42:51,207 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,207 | INFO     | mean y: 2344111.2457337882
[2026-05-04 08:43:36] 2026-05-04 06:42:51,207 | INFO     | intersect: 2344111.2457337882
[2026-05-04 08:43:36] 2026-05-04 06:42:51,208 | INFO     | chi2: 1.4108862453954747
[2026-05-04 08:43:36] 2026-05-04 06:42:51,208 | INFO     | current chi2=1.4108862453954747 (change=35.458027507698546 %)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,208 | INFO     | sum of square deviations: 7407141672.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,211 | INFO     | sum of deviations: 26324170336.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,211 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,211 | INFO     | mean y: 2343889.7569444445
[2026-05-04 08:43:36] 2026-05-04 06:42:51,211 | INFO     | intersect: 2343889.7569444445
[2026-05-04 08:43:36] 2026-05-04 06:42:51,212 | INFO     | chi2: 1.4113171558518753
[2026-05-04 08:43:36] 2026-05-04 06:42:51,212 | INFO     | current chi2=1.4113171558518753 (change=-0.03054182842925518 %)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,212 | INFO     | right removable region: 287
[2026-05-04 08:43:36] 2026-05-04 06:42:51,212 | INFO     | sum of square deviations: 7799669962.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,215 | INFO     | sum of deviations: -31430431535.999996
[2026-05-04 08:43:36] 2026-05-04 06:42:51,215 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,215 | INFO     | mean y: 2352270.3276450513
[2026-05-04 08:43:36] 2026-05-04 06:42:51,215 | INFO     | intersect: 2352270.3276450513
[2026-05-04 08:43:36] 2026-05-04 06:42:51,216 | INFO     | chi2: 0.832666697487229
[2026-05-04 08:43:36] 2026-05-04 06:42:51,216 | INFO     | current chi2=0.832666697487229 (change=61.90908284784346 %)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,217 | INFO     | sum of square deviations: 7407141672.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,219 | INFO     | sum of deviations: -30960834809.000004
[2026-05-04 08:43:36] 2026-05-04 06:42:51,219 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,219 | INFO     | mean y: 2352077.034722222
[2026-05-04 08:43:36] 2026-05-04 06:42:51,220 | INFO     | intersect: 2352077.034722222
[2026-05-04 08:43:36] 2026-05-04 06:42:51,220 | INFO     | chi2: 0.8282315687924188
[2026-05-04 08:43:36] 2026-05-04 06:42:51,220 | INFO     | current chi2=0.8282315687924188 (change=0.5326415369071781 %)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,220 | INFO     | left removable region: 10
[2026-05-04 08:43:36] 2026-05-04 06:42:51,221 | INFO     | sum of square deviations: 6590404498.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,223 | INFO     | sum of deviations: -12532903108.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,223 | INFO     | mean x (centered): 0.0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,224 | INFO     | mean y: 2359389.8989169677
[2026-05-04 08:43:36] 2026-05-04 06:42:51,224 | INFO     | intersect: 2359389.8989169677
[2026-05-04 08:43:36] 2026-05-04 06:42:51,224 | INFO     | chi2: 0.03878738544690783
[2026-05-04 08:43:36] 2026-05-04 06:42:51,224 | INFO     | current memory leak: -1.90 B/s (using 277 data points, chi2=0.04)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,225 | INFO     | could have reported an average CPU frequency of 2613 MHz (14 samples)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,225 | INFO     | ..............................
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . Timing measurements:
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . get job = 0 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . initial setup = 5 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . payload setup = 9 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . stage-in = 0 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . payload execution = 18142 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . stage-out = 1 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | . log creation = 0 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,226 | INFO     | ..............................
[2026-05-04 08:43:36] 2026-05-04 06:42:51,331 | INFO     | 
[2026-05-04 08:43:36] 2026-05-04 06:42:51,331 | INFO     | job summary report
[2026-05-04 08:43:36] 2026-05-04 06:42:51,331 | INFO     | --------------------------------------------------
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | PanDA job id: 7120114244
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | task id: 49863879
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | errors: (none)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | status: LOG_TRANSFER = DONE 
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | pilot state: finished 
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | transexitcode: 0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | exeerrorcode: 0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,332 | INFO     | exeerrordiag: 
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | exitcode: 0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | exitmsg: OK
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | cpuconsumptiontime: 67354 s
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | nevents: 400
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | neventsw: 0
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | pid: 2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | pgrp: 2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:51,333 | INFO     | corecount: 4
[2026-05-04 08:43:36] 2026-05-04 06:42:51,334 | INFO     | event service: False
[2026-05-04 08:43:36] 2026-05-04 06:42:51,334 | INFO     | sizes: {0: 2275597, 1: 2277171, 11: 2277199, 18155: 2309543, 18157: 2318563, 18158: 2318619, 18159: 2318941}
[2026-05-04 08:43:36] 2026-05-04 06:42:51,334 | INFO     | --------------------------------------------------
[2026-05-04 08:43:36] 2026-05-04 06:42:51,334 | INFO     | 
[2026-05-04 08:43:36] 2026-05-04 06:42:51,334 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/2
[2026-05-04 08:43:36] 2026-05-04 06:42:51,353 | INFO     | queue jobs had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue data_out had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | queue messages had 0 job(s) [purged]
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | job 7120114244 has completed (purged errors)
[2026-05-04 08:43:36] 2026-05-04 06:42:51,356 | INFO     | overall cleanup function is called
[2026-05-04 08:43:36] 2026-05-04 06:42:52,364 | INFO     | --- collectZombieJob: --- 10, [2242574]
[2026-05-04 08:43:36] 2026-05-04 06:42:52,364 | INFO     | zombie collector waiting for pid 2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:52,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-05-04 08:43:36] 2026-05-04 06:42:52,364 | INFO     | collected zombie processes
[2026-05-04 08:43:36] 2026-05-04 06:42:52,364 | INFO     | will attempt to kill all subprocesses of pid=2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:52,588 | INFO     | process IDs to be killed: [2242574] (in reverse order)
[2026-05-04 08:43:36] 2026-05-04 06:42:52,674 | WARNING  | found no corresponding commands to process id(s)
[2026-05-04 08:43:36] 2026-05-04 06:42:52,675 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-05-04 08:43:36] 2026-05-04 06:42:52,682 | INFO     | did not find any defunct processes belonging to 2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:52,688 | INFO     | did not find any defunct processes belonging to 2242574
[2026-05-04 08:43:36] 2026-05-04 06:42:52,689 | INFO     | Ready for new job
[2026-05-04 08:43:36] 2026-05-04 06:42:52,691 | INFO     | ***************************************
[2026-05-04 08:43:36] 2026-05-04 06:42:52,691 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-05-04 08:43:36] 2026-05-04 06:42:52,691 | INFO     | ***************************************
[2026-05-04 08:43:36] 2026-05-04 06:42:52,691 | INFO     | 
[2026-05-04 08:43:36] 2026-05-04 06:42:52,693 | INFO     | architecture information:
[2026-05-04 08:43:36] 2026-05-04 06:42:52,693 | INFO     | executing command: cat /etc/os-release
[2026-05-04 08:43:36] 2026-05-04 06:42:52,708 | INFO     | cat /etc/os-release:
[2026-05-04 08:43:36] NAME="CentOS Linux"
[2026-05-04 08:43:36] VERSION="7 (Core)"
[2026-05-04 08:43:36] ID="centos"
[2026-05-04 08:43:36] ID_LIKE="rhel fedora"
[2026-05-04 08:43:36] VERSION_ID="7"
[2026-05-04 08:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-05-04 08:43:36] ANSI_COLOR="0;31"
[2026-05-04 08:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-05-04 08:43:36] HOME_URL="https://www.centos.org/"
[2026-05-04 08:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-05-04 08:43:36] 
[2026-05-04 08:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-05-04 08:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-05-04 08:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-05-04 08:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-05-04 08:43:36] 
[2026-05-04 08:43:36] 2026-05-04 06:42:52,708 | INFO     | ***************************************
[2026-05-04 08:43:36] 2026-05-04 06:42:53,211 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/2
[2026-05-04 08:43:36] 2026-05-04 06:42:53,225 | INFO     | sufficient remaining disk space (136740601856 B)
[2026-05-04 08:43:36] 2026-05-04 06:42:53,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-05-04 08:43:36] 2026-05-04 06:42:53,226 | INFO     | current server update state: UPDATING_FINAL
[2026-05-04 08:43:36] 2026-05-04 06:42:53,226 | INFO     | update_server=False
[2026-05-04 08:43:36] 2026-05-04 06:42:53,226 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-05-04 08:43:36] 2026-05-04 06:42:53,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-05-04 08:43:36] 2026-05-04 06:42:53,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-05-04 08:43:36] 2026-05-04 06:42:53,330 | INFO     | all data control threads have been joined
[2026-05-04 08:43:36] 2026-05-04 06:42:53,541 | INFO     | all job control threads have been joined
[2026-05-04 08:43:36] 2026-05-04 06:42:54,141 | INFO     | all payload control threads have been joined
[2026-05-04 08:43:36] 2026-05-04 06:42:54,177 | INFO     | job.realtimelogging is not enabled
[2026-05-04 08:43:36] 2026-05-04 06:42:54,229 | INFO     | [job] retrieve thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,230 | INFO     | [job] queue monitor thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,335 | INFO     | [data] control thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,393 | WARNING  | process 2242574 can no longer be monitored (due to stat problems) - aborting
[2026-05-04 08:43:36] 2026-05-04 06:42:54,546 | INFO     | [job] control thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,593 | INFO     | using path: /var/lib/boinc/var/slot28/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-05-04 08:43:36] 2026-05-04 06:42:54,609 | INFO     | [data] copytool_in thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,610 | INFO     | [payload] execute_payloads thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,745 | INFO     | [job] validate thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,810 | INFO     | number of running child processes to parent process 2242574: 1
[2026-05-04 08:43:36] 2026-05-04 06:42:54,810 | INFO     | maximum number of monitored processes: 6
[2026-05-04 08:43:36] 2026-05-04 06:42:54,811 | INFO     | aborting job monitoring since job object (job id=7120114244) has expired
[2026-05-04 08:43:36] 2026-05-04 06:42:54,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-05-04 08:43:36] 2026-05-04 06:42:54,811 | INFO     | will abort loop
[2026-05-04 08:43:36] 2026-05-04 06:42:54,815 | INFO     | [payload] validate_pre thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:54,958 | INFO     | [job] create_data_payload thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,075 | INFO     | [payload] validate_post thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,146 | INFO     | [payload] control thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,182 | INFO     | [payload] run_realtimelog thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,232 | INFO     | [data] copytool_out thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,429 | INFO     | [payload] failed_post thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:55,816 | INFO     | [job] job monitor thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:42:56,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-05-04 08:43:36] 2026-05-04 06:43:00,269 | INFO     | [data] queue_monitor thread has finished
[2026-05-04 08:43:36] 2026-05-04 06:43:22,378 | INFO     | 18176s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-05-04 08:43:36] 2026-05-04 06:43:23,676 | INFO     | PID=2237463 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-05-04 08:43:36] 2026-05-04 06:43:23,677 | INFO     | .. there are 7 such processes running
[2026-05-04 08:43:36] 2026-05-04 06:43:23,678 | INFO     | found 0 job(s) in 20 queues
[2026-05-04 08:43:36] 2026-05-04 06:43:23,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-05-04 08:43:36] 2026-05-04 06:43:23,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-05-04 08:43:36] 2026-05-04 06:43:30,942 | INFO     | [monitor] cgroup control has ended
[2026-05-04 08:43:36] 2026-05-04 06:43:31,374 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23282994800448)>', '<ExcThread(monitor, started 23282758989568)>']
[2026-05-04 08:43:36] 2026-05-04 06:43:31,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-05-04 08:43:36] 2026-05-04 06:43:31,718 | INFO     | [monitor] control thread has ended
[2026-05-04 08:43:36] 2026-05-04 06:43:36,391 | INFO     | all workflow threads have been joined
[2026-05-04 08:43:36] 2026-05-04 06:43:36,391 | INFO     | end of generic workflow (traces error code: 0)
[2026-05-04 08:43:36] 2026-05-04 06:43:36,391 | INFO     | traces error code: 0
[2026-05-04 08:43:36] 2026-05-04 06:43:36,392 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-05-04 08:43:36] 2026-05-04 06:43:36,522 [wrapper] ==== pilot stdout END ====
[2026-05-04 08:43:36] 2026-05-04 06:43:36,525 [wrapper] ==== wrapper stdout RESUME ====
[2026-05-04 08:43:36] 2026-05-04 06:43:36,528 [wrapper] pilotpid: 2237463
[2026-05-04 08:43:36] 2026-05-04 06:43:36,530 [wrapper] Pilot exit status: 0
[2026-05-04 08:43:36] 2026-05-04 06:43:36,540 [wrapper] pandaids: 7120114244
[2026-05-04 08:43:36] 2026-05-04 06:43:36,587 [wrapper] cleanup supervisor_pilot 2451262 2237464
[2026-05-04 08:43:36] 2026-05-04 06:43:36,590 [wrapper] Test setup, not cleaning
[2026-05-04 08:43:36] 2026-05-04 06:43:36,592 [wrapper] apfmon messages muted
[2026-05-04 08:43:36] 2026-05-04 06:43:36,595 [wrapper] ==== wrapper stdout END ====
[2026-05-04 08:43:36] 2026-05-04 06:43:36,598 [wrapper] ==== wrapper stderr END ====
[2026-05-04 08:43:36]  *** Error codes and diagnostics ***
[2026-05-04 08:43:36]     "exeErrorCode": 0,
[2026-05-04 08:43:36]     "pilotErrorCode": 0,
[2026-05-04 08:43:36]  *** Listing of results directory ***
[2026-05-04 08:43:36] total 477512
[2026-05-04 08:43:36] -rwx------. 1 boinc boinc     36322 Apr 30 09:50 runpilot2-wrapper.sh
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc      5631 Apr 30 10:22 queuedata.json
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc    683926 Apr 30 10:22 pilot3.tar.gz
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc       100 May  4 03:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-05-04 08:43:36] -rwxr-xr-x. 1 boinc boinc      7986 May  4 03:39 run_atlas
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc       105 May  4 03:39 job.xml
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc      6265 May  4 03:39 init_data.xml
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc 265815473 May  4 03:39 EVNT.49863876._000145.pool.root.1
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc     15667 May  4 03:39 start_atlas.sh
[2026-05-04 08:43:36] drwxrwx--x. 2 boinc boinc      4096 May  4 03:39 shared
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc    697417 May  4 03:39 input.tar.gz
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc         0 May  4 03:39 boinc_lockfile
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc      2575 May  4 03:39 pandaJob.out
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc   1003017 May  4 03:39 agis_schedconf.cvmfs.json
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc       452 May  4 03:39 workernode_map.json
[2026-05-04 08:43:36] drwx------. 5 boinc boinc      4096 May  4 03:40 pilot3
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc 214870884 May  4 08:42 HITS.49863879._003601.pool.root.1
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc       489 May  4 08:42 boinc_task_state.xml
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc      1033 May  4 08:42 memory_monitor_summary.json
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc   1508687 May  4 08:42 agis_ddmendpoints.agis.ALL.json
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc    372910 May  4 08:42 log.49863879._003601.job.log.tgz.1
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc      6423 May  4 08:42 heartbeat_new.json
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc      6314 May  4 08:42 heartbeat.json
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc        95 May  4 08:43 pilot_heartbeat.json
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc      8192 May  4 08:43 boinc_mmap_file
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc        28 May  4 08:43 wrapper_checkpoint.txt
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc      5552 May  4 08:43 pilotlog.txt
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc   1700631 May  4 08:43 log.49863879._003601.job.log.1
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc       357 May  4 08:43 output.list
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc       410 May  4 08:43 runtime_log
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc   2088960 May  4 08:43 result.tar.gz
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc      8823 May  4 08:43 runtime_log.err
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc       664 May  4 08:43 09c469f4d1d2.diag
[2026-05-04 08:43:36] -rw-r--r--. 1 boinc boinc     20806 May  4 08:43 stderr.txt
[2026-05-04 08:43:36] HITS file was successfully produced:
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc 214870884 May  4 08:42 shared/HITS.pool.root.1
[2026-05-04 08:43:36]  *** Contents of shared directory: ***
[2026-05-04 08:43:36] total 472172
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc 265815473 May  4 03:39 ATLAS.root_0
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc     15667 May  4 03:39 start_atlas.sh
[2026-05-04 08:43:36] -rw-r--r--. 2 boinc boinc    697417 May  4 03:39 input.tar.gz
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc 214870884 May  4 08:42 HITS.pool.root.1
[2026-05-04 08:43:36] -rw-------. 1 boinc boinc   2088960 May  4 08:43 result.tar.gz
08:43:38 (2233818): run_atlas exited; CPU time 67872.620241
08:43:38 (2233818): called boinc_finish(0)

</stderr_txt>
]]>

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