Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:58:00 (3227736): wrapper (7.7.26015): starting
03:58:00 (3227736): wrapper: running run_atlas (--nthreads 8)
[2026-04-30 03:58:00] Arguments: --nthreads 8
[2026-04-30 03:58:00] Threads: 8
[2026-04-30 03:58:00] Checking for CVMFS
[2026-04-30 03:58:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-04-30 03:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-04-30 03:58:00] Running cvmfs_config stat atlas.cern.ch
[2026-04-30 03:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-04-30 03:58:01] 2.13.3.0 4282 173403 532016 159040 3 186 38242080 39288833 2212 16776704 0 92361749 99.627 119051610 36170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-04-30 03:58:01] CVMFS is ok
[2026-04-30 03:58:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-04-30 03:58:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-04-30 03:58:01] Further information can be found at the LHC@home message board.
[2026-04-30 03:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-04-30 03:58:01] Checking for apptainer binary...
[2026-04-30 03:58:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-04-30 03:58:01] Running /usr/bin/apptainer --version
[2026-04-30 03:58:01] apptainer version 1.4.5-3.el9
[2026-04-30 03:58:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-04-30 03:58:01] c-211-32.aglt2.org
[2026-04-30 03:58:01] apptainer works
[2026-04-30 03:58:01] Set ATHENA_PROC_NUMBER=8
[2026-04-30 03:58:01] Set ATHENA_CORE_NUMBER=8
[2026-04-30 03:58:01] Starting ATLAS job with PandaID=7120114183
[2026-04-30 03:58:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-04-30 07:47:41]  *** The last 200 lines of the pilot log: ***
[2026-04-30 07:47:41] 2026-04-30 11:46:33,647 | INFO     | total number of processed events: 400 (read)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,655 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-7120114183/memory_monitor_summary.json (trf name=prmon)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,656 | INFO     | extracted standard info from prmon json
[2026-04-30 07:47:41] 2026-04-30 11:46:33,656 | INFO     | extracted standard memory fields from prmon json
[2026-04-30 07:47:41] 2026-04-30 11:46:33,657 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-04-30 07:47:41] 2026-04-30 11:46:33,657 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-04-30 07:47:41] 2026-04-30 11:46:33,663 | INFO     | fitting pss+swap vs Time
[2026-04-30 07:47:41] 2026-04-30 11:46:33,663 | INFO     | sum of square deviations: 3531973200.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,665 | INFO     | sum of deviations: 21244942628.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,665 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,666 | INFO     | mean y: 2520785.8133333335
[2026-04-30 07:47:41] 2026-04-30 11:46:33,666 | INFO     | intersect: 2520785.8133333335
[2026-04-30 07:47:41] 2026-04-30 11:46:33,666 | INFO     | chi2: 2.018900391845228
[2026-04-30 07:47:41] 2026-04-30 11:46:33,667 | INFO     | sum of square deviations: 3301699115.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,668 | INFO     | sum of deviations: 36145539264.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,669 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,669 | INFO     | mean y: 2530467.6818181816
[2026-04-30 07:47:41] 2026-04-30 11:46:33,669 | INFO     | intersect: 2530467.6818181816
[2026-04-30 07:47:41] 2026-04-30 11:46:33,669 | INFO     | chi2: 1.1991755299236089
[2026-04-30 07:47:41] 2026-04-30 11:46:33,670 | INFO     | current chi2=1.1991755299236089 (change=40.602541127470374 %)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,670 | INFO     | sum of square deviations: 3081657780.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,672 | INFO     | sum of deviations: 35182985738.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,672 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,672 | INFO     | mean y: 2529800.288372093
[2026-04-30 07:47:41] 2026-04-30 11:46:33,672 | INFO     | intersect: 2529800.288372093
[2026-04-30 07:47:41] 2026-04-30 11:46:33,673 | INFO     | chi2: 1.1994141848054145
[2026-04-30 07:47:41] 2026-04-30 11:46:33,673 | INFO     | current chi2=1.1994141848054145 (change=-0.019901580365039334 %)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,673 | INFO     | right removable region: 214
[2026-04-30 07:47:41] 2026-04-30 11:46:33,674 | INFO     | sum of square deviations: 3301699115.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,675 | INFO     | sum of deviations: -8978048442.000002
[2026-04-30 07:47:41] 2026-04-30 11:46:33,676 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,676 | INFO     | mean y: 2540606.2545454544
[2026-04-30 07:47:41] 2026-04-30 11:46:33,676 | INFO     | intersect: 2540606.2545454544
[2026-04-30 07:47:41] 2026-04-30 11:46:33,676 | INFO     | chi2: 0.8548488081094576
[2026-04-30 07:47:41] 2026-04-30 11:46:33,677 | INFO     | current chi2=0.8548488081094576 (change=57.65770260076349 %)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,677 | INFO     | sum of square deviations: 3081657780.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,679 | INFO     | sum of deviations: -11824574280.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,679 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,679 | INFO     | mean y: 2542547.7255813954
[2026-04-30 07:47:41] 2026-04-30 11:46:33,679 | INFO     | intersect: 2542547.7255813954
[2026-04-30 07:47:41] 2026-04-30 11:46:33,680 | INFO     | chi2: 0.8384934638468325
[2026-04-30 07:47:41] 2026-04-30 11:46:33,680 | INFO     | current chi2=0.8384934638468325 (change=1.9132440856758952 %)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,680 | INFO     | left removable region: 10
[2026-04-30 07:47:41] 2026-04-30 11:46:33,680 | INFO     | sum of square deviations: 2632440055.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,682 | INFO     | sum of deviations: 2881339117.4999995
[2026-04-30 07:47:41] 2026-04-30 11:46:33,682 | INFO     | mean x (centered): 0.0
[2026-04-30 07:47:41] 2026-04-30 11:46:33,682 | INFO     | mean y: 2553010.1421568627
[2026-04-30 07:47:41] 2026-04-30 11:46:33,683 | INFO     | intersect: 2553010.1421568627
[2026-04-30 07:47:41] 2026-04-30 11:46:33,683 | INFO     | chi2: 0.0032647092014280008
[2026-04-30 07:47:41] 2026-04-30 11:46:33,683 | INFO     | current memory leak: 1.09 B/s (using 204 data points, chi2=0.00)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | could have reported an average CPU frequency of 3051 MHz (11 samples)
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | ..............................
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | . Timing measurements:
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | . get job = 0 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | . initial setup = 5 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,684 | INFO     | . payload setup = 6 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,685 | INFO     | . stage-in = 0 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,685 | INFO     | . payload execution = 13672 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,685 | INFO     | . stage-out = 2 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,685 | INFO     | . log creation = 0 s
[2026-04-30 07:47:41] 2026-04-30 11:46:33,685 | INFO     | ..............................
[2026-04-30 07:47:41] 2026-04-30 11:46:34,208 | INFO     | 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,208 | INFO     | job summary report
[2026-04-30 07:47:41] 2026-04-30 11:46:34,208 | INFO     | --------------------------------------------------
[2026-04-30 07:47:41] 2026-04-30 11:46:34,208 | INFO     | PanDA job id: 7120114183
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | task id: 49863879
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | errors: (none)
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | status: LOG_TRANSFER = DONE 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | pilot state: finished 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | transexitcode: 0
[2026-04-30 07:47:41] 2026-04-30 11:46:34,209 | INFO     | exeerrorcode: 0
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | exeerrordiag: 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | exitcode: 0
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | exitmsg: OK
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | cpuconsumptiontime: 101664 s
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | nevents: 400
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | neventsw: 0
[2026-04-30 07:47:41] 2026-04-30 11:46:34,210 | INFO     | pid: 3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | pgrp: 3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | corecount: 8
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | event service: False
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | sizes: {0: 2282512, 11: 2282512, 13682: 2312864, 13684: 2318283, 13687: 2318339, 13689: 2318533}
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | --------------------------------------------------
[2026-04-30 07:47:41] 2026-04-30 11:46:34,211 | INFO     | 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,212 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-04-30 07:47:41] 2026-04-30 11:46:34,226 | INFO     | queue jobs had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,226 | INFO     | queue data_in had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,226 | INFO     | queue data_out had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,229 | INFO     | queue completed_jobids has 1 job(s)
[2026-04-30 07:47:41] 2026-04-30 11:46:34,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,229 | INFO     | queue messages had 0 job(s) [purged]
[2026-04-30 07:47:41] 2026-04-30 11:46:34,229 | INFO     | job 7120114183 has completed (purged errors)
[2026-04-30 07:47:41] 2026-04-30 11:46:34,229 | INFO     | overall cleanup function is called
[2026-04-30 07:47:41] 2026-04-30 11:46:34,580 | INFO     | PID=3231521 has CPU usage=10.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-04-30 07:47:41] 2026-04-30 11:46:34,580 | INFO     | .. there are 5 such processes running
[2026-04-30 07:47:41] 2026-04-30 11:46:35,238 | INFO     | --- collectZombieJob: --- 10, [3244025]
[2026-04-30 07:47:41] 2026-04-30 11:46:35,238 | INFO     | zombie collector waiting for pid 3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:35,238 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-04-30 07:47:41] 2026-04-30 11:46:35,239 | INFO     | collected zombie processes
[2026-04-30 07:47:41] 2026-04-30 11:46:35,239 | INFO     | will attempt to kill all subprocesses of pid=3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:35,471 | INFO     | process IDs to be killed: [3244025] (in reverse order)
[2026-04-30 07:47:41] 2026-04-30 11:46:35,518 | WARNING  | found no corresponding commands to process id(s)
[2026-04-30 07:47:41] 2026-04-30 11:46:35,518 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-04-30 07:47:41] 2026-04-30 11:46:35,528 | INFO     | did not find any defunct processes belonging to 3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:35,537 | INFO     | did not find any defunct processes belonging to 3244025
[2026-04-30 07:47:41] 2026-04-30 11:46:35,537 | INFO     | Ready for new job
[2026-04-30 07:47:41] 2026-04-30 11:46:35,539 | INFO     | ***************************************
[2026-04-30 07:47:41] 2026-04-30 11:46:35,539 | INFO     | ***  PanDA Pilot version 3.13.0.23  ***
[2026-04-30 07:47:41] 2026-04-30 11:46:35,540 | INFO     | ***************************************
[2026-04-30 07:47:41] 2026-04-30 11:46:35,540 | INFO     | 
[2026-04-30 07:47:41] 2026-04-30 11:46:35,542 | INFO     | architecture information:
[2026-04-30 07:47:41] 2026-04-30 11:46:35,542 | INFO     | executing command: cat /etc/os-release
[2026-04-30 07:47:41] 2026-04-30 11:46:35,552 | INFO     | cat /etc/os-release:
[2026-04-30 07:47:41] NAME="CentOS Linux"
[2026-04-30 07:47:41] VERSION="7 (Core)"
[2026-04-30 07:47:41] ID="centos"
[2026-04-30 07:47:41] ID_LIKE="rhel fedora"
[2026-04-30 07:47:41] VERSION_ID="7"
[2026-04-30 07:47:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-04-30 07:47:41] ANSI_COLOR="0;31"
[2026-04-30 07:47:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-04-30 07:47:41] HOME_URL="https://www.centos.org/"
[2026-04-30 07:47:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-04-30 07:47:41] 
[2026-04-30 07:47:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-04-30 07:47:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-04-30 07:47:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-04-30 07:47:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-04-30 07:47:41] 
[2026-04-30 07:47:41] 2026-04-30 11:46:35,553 | INFO     | ***************************************
[2026-04-30 07:47:41] 2026-04-30 11:46:36,056 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-04-30 07:47:41] 2026-04-30 11:46:36,071 | INFO     | sufficient remaining disk space (51054116864 B)
[2026-04-30 07:47:41] 2026-04-30 11:46:36,071 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-04-30 07:47:41] 2026-04-30 11:46:36,071 | INFO     | current server update state: UPDATING_FINAL
[2026-04-30 07:47:41] 2026-04-30 11:46:36,071 | INFO     | update_server=False
[2026-04-30 07:47:41] 2026-04-30 11:46:36,071 | WARNING  | proceed_with_getjob() returned False &#226;&#128;&#148; stopping retrieve loop (pilot will end)
[2026-04-30 07:47:41] 2026-04-30 11:46:36,316 | INFO     | all payload control threads have been joined
[2026-04-30 07:47:41] 2026-04-30 11:46:36,492 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-04-30 07:47:41] 2026-04-30 11:46:36,492 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-04-30 07:47:41] 2026-04-30 11:46:36,492 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-04-30 07:47:41] 2026-04-30 11:46:36,492 | INFO     | will abort loop
[2026-04-30 07:47:41] 2026-04-30 11:46:36,730 | INFO     | all job control threads have been joined
[2026-04-30 07:47:41] 2026-04-30 11:46:36,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-04-30 07:47:41] 2026-04-30 11:46:37,076 | INFO     | [job] retrieve thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,120 | INFO     | all data control threads have been joined
[2026-04-30 07:47:41] 2026-04-30 11:46:37,295 | INFO     | [payload] validate_post thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,321 | INFO     | [payload] control thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,498 | INFO     | [job] job monitor thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,558 | INFO     | [data] copytool_in thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,625 | INFO     | [payload] validate_pre thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,682 | INFO     | [job] create_data_payload thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,736 | INFO     | [job] control thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,763 | INFO     | [payload] failed_post thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:37,843 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-04-30 07:47:41] 2026-04-30 11:46:37,960 | INFO     | [payload] execute_payloads thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:38,125 | INFO     | [data] control thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:38,391 | INFO     | [job] validate thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:38,779 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-04-30 07:47:41] 2026-04-30 11:46:38,797 | INFO     | [data] copytool_out thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:39,783 | INFO     | [job] queue monitor thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:41,849 | INFO     | [data] queue_monitor thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:46:46,545 | INFO     | job.realtimelogging is not enabled
[2026-04-30 07:47:41] 2026-04-30 11:46:47,550 | INFO     | [payload] run_realtimelog thread has finished
[2026-04-30 07:47:41] 2026-04-30 11:47:06,990 | INFO     | PID=3231521 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-04-30 07:47:41] 2026-04-30 11:47:06,990 | INFO     | .. there are 5 such processes running
[2026-04-30 07:47:41] 2026-04-30 11:47:06,991 | INFO     | found 0 job(s) in 20 queues
[2026-04-30 07:47:41] 2026-04-30 11:47:06,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-04-30 07:47:41] 2026-04-30 11:47:06,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-04-30 07:47:41] 2026-04-30 11:47:35,410 | INFO     | [monitor] cgroup control has ended
[2026-04-30 07:47:41] 2026-04-30 11:47:36,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971889911616)>', '<ExcThread(monitor, started 139971532924672)>']
[2026-04-30 07:47:41] 2026-04-30 11:47:37,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-04-30 07:47:41] 2026-04-30 11:47:37,137 | INFO     | [monitor] control thread has ended
[2026-04-30 07:47:41] 2026-04-30 11:47:41,671 | INFO     | all workflow threads have been joined
[2026-04-30 07:47:41] 2026-04-30 11:47:41,671 | INFO     | end of generic workflow (traces error code: 0)
[2026-04-30 07:47:41] 2026-04-30 11:47:41,672 | INFO     | traces error code: 0
[2026-04-30 07:47:41] 2026-04-30 11:47:41,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-04-30 07:47:41] 2026-04-30 11:47:41,773 [wrapper] ==== pilot stdout END ====
[2026-04-30 07:47:41] 2026-04-30 11:47:41,776 [wrapper] ==== wrapper stdout RESUME ====
[2026-04-30 07:47:41] 2026-04-30 11:47:41,778 [wrapper] pilotpid: 3231521
[2026-04-30 07:47:41] 2026-04-30 11:47:41,780 [wrapper] Pilot exit status: 0
[2026-04-30 07:47:41] 2026-04-30 11:47:41,790 [wrapper] pandaids: 7120114183
[2026-04-30 07:47:41] 2026-04-30 11:47:41,842 [wrapper] cleanup supervisor_pilot 3575758 3231522
[2026-04-30 07:47:41] 2026-04-30 11:47:41,845 [wrapper] Test setup, not cleaning
[2026-04-30 07:47:41] 2026-04-30 11:47:41,848 [wrapper] apfmon messages muted
[2026-04-30 07:47:41] 2026-04-30 11:47:41,851 [wrapper] ==== wrapper stdout END ====
[2026-04-30 07:47:41] 2026-04-30 11:47:41,854 [wrapper] ==== wrapper stderr END ====
[2026-04-30 07:47:41]  *** Error codes and diagnostics ***
[2026-04-30 07:47:41]     "exeErrorCode": 0,
[2026-04-30 07:47:41]     "pilotErrorCode": 0,
[2026-04-30 07:47:41]  *** Listing of results directory ***
[2026-04-30 07:47:41] total 478212
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas    683926 Apr 30 03:48 pilot3.tar.gz
[2026-04-30 07:47:41] -rwx------. 1 boincer umatlas     36322 Apr 30 03:53 runpilot2-wrapper.sh
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas      5631 Apr 30 03:54 queuedata.json
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas       100 Apr 30 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-04-30 07:47:41] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 30 03:58 run_atlas
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas       105 Apr 30 03:58 job.xml
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas 266818155 Apr 30 03:58 EVNT.49863876._000143.pool.root.1
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 03:58 start_atlas.sh
[2026-04-30 07:47:41] drwxrwx--x. 2 boincer umatlas      4096 Apr 30 03:58 shared
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas    697413 Apr 30 03:58 input.tar.gz
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas         0 Apr 30 03:58 boinc_lockfile
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas      2574 Apr 30 03:58 pandaJob.out
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas        57 Apr 30 03:58 setup.sh.local
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas   1000503 Apr 30 03:58 agis_schedconf.cvmfs.json
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas       435 Apr 30 03:58 workernode_map.json
[2026-04-30 07:47:41] drwx------. 5 boincer umatlas      4096 Apr 30 03:58 pilot3
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas      6443 Apr 30 07:45 init_data.xml
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas       489 Apr 30 07:45 boinc_task_state.xml
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas 215426738 Apr 30 07:45 HITS.49863879._003540.pool.root.1
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas      1034 Apr 30 07:46 memory_monitor_summary.json
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas   1510841 Apr 30 07:46 agis_ddmendpoints.agis.ALL.json
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas    379952 Apr 30 07:46 log.49863879._003540.job.log.tgz.1
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas      6393 Apr 30 07:46 heartbeat_new.json
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas      6284 Apr 30 07:46 heartbeat.json
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas        95 Apr 30 07:47 pilot_heartbeat.json
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas      8192 Apr 30 07:47 boinc_mmap_file
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas        29 Apr 30 07:47 wrapper_checkpoint.txt
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas      5080 Apr 30 07:47 pilotlog.txt
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas   1268518 Apr 30 07:47 log.49863879._003540.job.log.1
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas       357 Apr 30 07:47 output.list
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas       410 Apr 30 07:47 runtime_log
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas   1669120 Apr 30 07:47 result.tar.gz
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas      8965 Apr 30 07:47 runtime_log.err
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas       657 Apr 30 07:47 0a87e55facc7.diag
[2026-04-30 07:47:41] -rw-r--r--. 1 boincer umatlas     21052 Apr 30 07:47 stderr.txt
[2026-04-30 07:47:41] HITS file was successfully produced:
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas 215426738 Apr 30 07:45 shared/HITS.pool.root.1
[2026-04-30 07:47:41]  *** Contents of shared directory: ***
[2026-04-30 07:47:41] total 473288
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas 266818155 Apr 30 03:58 ATLAS.root_0
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas     15667 Apr 30 03:58 start_atlas.sh
[2026-04-30 07:47:41] -rw-r--r--. 2 boincer umatlas    697413 Apr 30 03:58 input.tar.gz
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas 215426738 Apr 30 07:45 HITS.pool.root.1
[2026-04-30 07:47:41] -rw-------. 1 boincer umatlas   1669120 Apr 30 07:47 result.tar.gz
07:47:42 (3227736): run_atlas exited; CPU time 102052.448677
07:47:42 (3227736): called boinc_finish(0)

</stderr_txt>
]]>

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